Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10472
         (674 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    24   1.3  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    24   1.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.3  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 168 LHKYIIF*EINKIILRDQFMLAIKIYKVCFL 76
           LHK+ I+ ++ KII+R     A+K    C L
Sbjct: 656 LHKFRIYIQVTKIIIRTDHQ-ALKFLSRCRL 685


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 526 KCNSKQNEVQTEIIQILKH 470
           KC+ KQ E+  ++I  L H
Sbjct: 72  KCSEKQKEMTKKVIHFLSH 90


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +3

Query: 318 CHDI-VFQ*YCILYSINDISIIYNKFVIANAIVISS 422
           C+ I +F  Y I YS+++ SII   + +A  ++ +S
Sbjct: 148 CYFIYLFTVYYIYYSVHEASIINFGYTLAKFMIFTS 183


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 357 SINDISIIYNKFVIANAIVISS 422
           +I  +SII N+FVI N  +  S
Sbjct: 178 TIEFVSIIRNRFVILNRYIEES 199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,912
Number of Sequences: 336
Number of extensions: 2944
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)