Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10471
         (441 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.0  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   5.2  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   6.9  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   6.9  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    20   9.1  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    20   9.1  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    20   9.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    20   9.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 108 KALPYHRDHRS*THVLY 58
           K +P H D R  THV+Y
Sbjct: 655 KFVPEHIDQRLCTHVVY 671


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 324 IHFNLYILSCSHDLC*TFC 380
           + F+L  L   H+LC  FC
Sbjct: 154 LRFHLLELEKVHELCDNFC 172


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -1

Query: 387 FNHRMFNINHENKTIYTD*NEF 322
           FN   FN N++    Y++ N +
Sbjct: 206 FNDPQFNFNYQYNQAYSNYNNY 227


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -1

Query: 387 FNHRMFNINHENKTIYTD*NEF 322
           FN   FN N++    Y++ N +
Sbjct: 226 FNDPQFNFNYQYNQAYSNYNNY 247


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
          protein.
          Length = 74

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 96 YHRDHRS*THVLY*TREERPRCQ 28
          + RDH   TH+   T E   RC+
Sbjct: 19 FTRDHHLKTHMRLHTGERPYRCE 41


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -2

Query: 164 CESAGLVAPSILRPVFTTLR 105
           CE  GL      RP F+  R
Sbjct: 242 CEKCGLKKIEFCRPTFSAAR 261


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/34 (20%), Positives = 19/34 (55%)
 Frame = -2

Query: 347 QYIQIKMNLLINPVFICRYPAHNFFVRKPEAISF 246
           Q  + +++L +  VF+  Y   ++FV++ +   +
Sbjct: 128 QRTRSRIHLFVRYVFVTSYLLFDYFVQRNQEYKY 161


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 96  YHRDHRS*THVLY*TREERPRCQ 28
           + RDH   TH+   T E   RC+
Sbjct: 172 FTRDHHLKTHMRLHTGERPYRCE 194


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,221
Number of Sequences: 336
Number of extensions: 2422
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9880622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)