Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10471
         (441 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0945 - 21738643-21738760,21740056-21740287,21740582-217406...   129   1e-30
07_03_0445 - 18281715-18281832,18282274-18282505,18283486-182835...   126   6e-30
12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215...   125   2e-29
05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416...   121   3e-28
01_06_0986 - 33602714-33602741,33603037-33603146,33603401-336036...    27   5.1  
01_06_0319 - 28441082-28441102,28441630-28441701,28442568-284426...    27   6.7  

>10_08_0945 -
           21738643-21738760,21740056-21740287,21740582-21740630,
           21740720-21740776
          Length = 151

 Score =  129 bits (311), Expect = 1e-30
 Identities = 55/83 (66%), Positives = 72/83 (86%)
 Frame = +1

Query: 10  QQHYSDLASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRKMLGATNPADSQPGTIRGDL 189
           ++HY+DL+S+PFF GLV+Y+ SGPVV MVWEG  VV TGRK++GATNP  ++PGTIRGD 
Sbjct: 48  EKHYADLSSKPFFGGLVEYIVSGPVVAMVWEGKQVVSTGRKLVGATNPLAAEPGTIRGDF 107

Query: 190 *IQVGRNIIHGSDSVESAKKEMA 258
            + +GRN+IHGSDSVE+A+KE+A
Sbjct: 108 AVDIGRNVIHGSDSVENARKEIA 130


>07_03_0445 -
           18281715-18281832,18282274-18282505,18283486-18283534,
           18283733-18283783
          Length = 149

 Score =  126 bits (305), Expect = 6e-30
 Identities = 54/83 (65%), Positives = 71/83 (85%)
 Frame = +1

Query: 10  QQHYSDLASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRKMLGATNPADSQPGTIRGDL 189
           QQHY+DL+ +PFFPGLV+Y+ SGPVV MVWEG +VV TGR+++GAT P ++ PGTIR D 
Sbjct: 46  QQHYADLSDKPFFPGLVEYIISGPVVAMVWEGKDVVATGRRIIGATRPWEAAPGTIRADY 105

Query: 190 *IQVGRNIIHGSDSVESAKKEMA 258
            ++VGRN+IHGSDSV++ KKE+A
Sbjct: 106 AVEVGRNVIHGSDSVDNGKKEIA 128


>12_02_0695 +
           22220054-22220056,22221226-22221276,22221415-22221501,
           22222064-22222144,22222241-22222353,22222482-22222531,
           22222790-22222857
          Length = 150

 Score =  125 bits (301), Expect = 2e-29
 Identities = 51/86 (59%), Positives = 70/86 (81%)
 Frame = +1

Query: 1   ELLQQHYSDLASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRKMLGATNPADSQPGTIR 180
           +L Q+HY DL  +PFFPGL++Y++SGPVV M WEG  VV + RK++GATNP  ++PGTIR
Sbjct: 44  DLAQEHYKDLKEKPFFPGLIEYITSGPVVCMAWEGNGVVASARKLIGATNPLQAEPGTIR 103

Query: 181 GDL*IQVGRNIIHGSDSVESAKKEMA 258
           GDL +Q GRN++HGSDS ++ K+E+A
Sbjct: 104 GDLAVQTGRNVVHGSDSPDNGKREIA 129


>05_07_0347 -
           29440541-29440664,29440908-29441020,29441522-29441689,
           29442341-29442391,29442518-29442555,29442885-29442978
          Length = 195

 Score =  121 bits (291), Expect = 3e-28
 Identities = 55/94 (58%), Positives = 69/94 (73%)
 Frame = +1

Query: 1   ELLQQHYSDLASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRKMLGATNPADSQPGTIR 180
           E  Q+HY DL  RPFF GL  ++SSGPV+ MVWEG  V+K GRK++GAT+P  S+PGTIR
Sbjct: 87  EFAQKHYHDLKDRPFFNGLCDFLSSGPVLAMVWEGEGVIKYGRKLIGATDPQKSEPGTIR 146

Query: 181 GDL*IQVGRNIIHGSDSVESAKKEMASGLRTKKL 282
           GDL + VGRNIIHGSD  E+AK E+      ++L
Sbjct: 147 GDLAVVVGRNIIHGSDGPETAKAEIGLWFEPREL 180



 Score = 28.7 bits (61), Expect = 2.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 255 GLWFTDKEVVGWIPANENWVY 317
           GLWF  +E+V +    E W+Y
Sbjct: 172 GLWFEPRELVSYTSNEEKWIY 192


>01_06_0986 -
          33602714-33602741,33603037-33603146,33603401-33603601,
          33604605-33604697,33604937-33605182,33606007-33606372,
          33606459-33606599,33607170-33607526
          Length = 513

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 31 ASRPFFPGLVKYMSSGPVVP 90
          ASRPF PGL++     PV+P
Sbjct: 22 ASRPFLPGLLEAALRAPVLP 41


>01_06_0319 -
           28441082-28441102,28441630-28441701,28442568-28442627,
           28442918-28443105,28444300-28444327,28444880-28444907,
           28444942-28445163,28445238-28445409,28446224-28447468,
           28447573-28447741,28447820-28448045,28449096-28449451,
           28449530-28449724,28450655-28450864,28451729-28452004
          Length = 1155

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -2

Query: 128 RPVFTTLRPSHTIGTTGPELMYFTRPGKKGRDAKSL 21
           RP       S+T  +  P+    +RPGK+G DA+S+
Sbjct: 529 RPFCPCASRSNTDASLHPQTENGSRPGKRGNDAESV 564


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,150,042
Number of Sequences: 37544
Number of extensions: 236689
Number of successful extensions: 595
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 835800280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)