Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10471
(441 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-13|CAB02101.1| 153|Caenorhabditis elegans Hypothetical p... 130 4e-31
AC006644-2|AAF39837.1| 118|Caenorhabditis elegans Hypothetical ... 60 7e-10
AC025721-13|AAR85897.1| 139|Caenorhabditis elegans Hypothetical... 35 0.023
U29382-6|AAF99998.1| 379|Caenorhabditis elegans Hypothetical pr... 27 4.6
Z81129-6|CAB03412.1| 799|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z81129-5|CAB03411.1| 779|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical pr... 27 6.0
AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocar... 27 6.0
AF022972-13|AAC48241.2| 527|Caenorhabditis elegans Udp-glucuron... 27 8.0
>Z79754-13|CAB02101.1| 153|Caenorhabditis elegans Hypothetical
protein F25H2.5 protein.
Length = 153
Score = 130 bits (314), Expect = 4e-31
Identities = 58/92 (63%), Positives = 72/92 (78%)
Frame = +1
Query: 7 LQQHYSDLASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRKMLGATNPADSQPGTIRGD 186
L+ HY DL +PFFP L++YMSSGPVV MVW+GL+VVK GR MLGATNP S PGTIRGD
Sbjct: 48 LEVHYQDLKDKPFFPSLIEYMSSGPVVAMVWQGLDVVKQGRSMLGATNPLASAPGTIRGD 107
Query: 187 L*IQVGRNIIHGSDSVESAKKEMASGLRTKKL 282
IQ GRNI HGSD+V+SA +E+A + +++
Sbjct: 108 FCIQTGRNICHGSDAVDSANREIAHWFKQEEI 139
>AC006644-2|AAF39837.1| 118|Caenorhabditis elegans Hypothetical
protein F55A3.6 protein.
Length = 118
Score = 60.1 bits (139), Expect = 7e-10
Identities = 34/72 (47%), Positives = 44/72 (61%)
Frame = +1
Query: 37 RPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRKMLGATNPADSQPGTIRGDL*IQVGRNII 216
+PFFP L+ YMSSGPVV M+WEG +VVK R +LG + +I DL ++
Sbjct: 33 KPFFPLLIDYMSSGPVVAMLWEGCDVVKRARVILGEELEV-GEFRSIFYDLVVRDTHKGC 91
Query: 217 HGSDSVESAKKE 252
H SDSV SA +E
Sbjct: 92 HCSDSVASANRE 103
>AC025721-13|AAR85897.1| 139|Caenorhabditis elegans Hypothetical
protein Y48G8AL.15 protein.
Length = 139
Score = 35.1 bits (77), Expect = 0.023
Identities = 27/84 (32%), Positives = 41/84 (48%)
Frame = +1
Query: 4 LLQQHYSDLASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRKMLGATNPADSQPGTIRG 183
L +Q Y+ + F+ LV+++SSGPV+ M G G L QP IR
Sbjct: 53 LAKQLYAQHQGKFFYDRLVRHISSGPVIAMRVSGNARKCIGSSRLWPRLEPTVQP--IRQ 110
Query: 184 DL*IQVGRNIIHGSDSVESAKKEM 255
+ RN+ H SD ++A+KE+
Sbjct: 111 RFALSDVRNVAHASDE-DAAEKEL 133
>U29382-6|AAF99998.1| 379|Caenorhabditis elegans Hypothetical
protein R03H10.1 protein.
Length = 379
Score = 27.5 bits (58), Expect = 4.6
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = +1
Query: 4 LLQQHYSDLASRPFFPGLVKYMSSGPVVPMVW 99
LL + + ++ S +PG V+++ P++P W
Sbjct: 144 LLDRCWKNVDSMELYPGTVQFLDKLPIIPSNW 175
>Z81129-6|CAB03412.1| 799|Caenorhabditis elegans Hypothetical
protein T23F1.7b protein.
Length = 799
Score = 27.1 bits (57), Expect = 6.0
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +1
Query: 22 SDLASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTG--RKMLGATNPADSQPGTIR 180
SDL S + + + VV WEG+ +V+ G R + G N A+ P R
Sbjct: 66 SDLRSLRYPYAEFAFTDNNAVVMQSWEGVEIVEDGVSRLIFGRENGAEITPSADR 120
>Z81129-5|CAB03411.1| 779|Caenorhabditis elegans Hypothetical
protein T23F1.7a protein.
Length = 779
Score = 27.1 bits (57), Expect = 6.0
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +1
Query: 22 SDLASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTG--RKMLGATNPADSQPGTIR 180
SDL S + + + VV WEG+ +V+ G R + G N A+ P R
Sbjct: 66 SDLRSLRYPYAEFAFTDNNAVVMQSWEGVEIVEDGVSRLIFGRENGAEITPSADR 120
>Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical
protein C41G7.5b protein.
Length = 560
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 168 RLRVSWVSCAKHFTSSLHNIKAL 100
RL VS++ C HF + LHN + L
Sbjct: 20 RLAVSFLQCKAHFQACLHNSQFL 42
>Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical
protein C41G7.5a protein.
Length = 602
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 168 RLRVSWVSCAKHFTSSLHNIKAL 100
RL VS++ C HF + LHN + L
Sbjct: 62 RLAVSFLQCKAHFQACLHNSQFL 84
>AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocarbon
receptor orthologAHR-1 protein.
Length = 602
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 168 RLRVSWVSCAKHFTSSLHNIKAL 100
RL VS++ C HF + LHN + L
Sbjct: 62 RLAVSFLQCKAHFQACLHNSQFL 84
>AF022972-13|AAC48241.2| 527|Caenorhabditis elegans
Udp-glucuronosyltransferase protein41 protein.
Length = 527
Score = 26.6 bits (56), Expect = 8.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 259 SGLRTKKLWAGYLQMKTGFMSKFILICIYCLVLMI 363
S LRT A YL F++ F+L+ I+ + +MI
Sbjct: 479 SNLRTMGFAAYYLLDVIAFLTSFVLLVIFVVFIMI 513
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,436,709
Number of Sequences: 27780
Number of extensions: 209713
Number of successful extensions: 569
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -