Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10470
(626 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0003 + 13079-13610,14005-14312,14364-14549,14620-14707,148... 57 1e-08
09_04_0038 - 13996505-13996836,13997047-13997077,13997307-139974... 42 4e-04
02_05_0110 + 25914110-25915006,25915726-25915797,25916411-259166... 34 0.11
12_02_1010 + 25269721-25269787,25270162-25270308,25270407-252707... 32 0.32
10_08_0435 + 17905728-17905901,17906608-17906931,17907205-179073... 32 0.32
03_05_0859 - 28329837-28329919,28330062-28330131,28330498-283305... 32 0.32
03_05_0688 + 26762668-26762893,26763027-26763101,26763865-267640... 32 0.43
04_04_0639 + 26883810-26883821,26884131-26884307,26885276-268853... 31 0.57
06_01_0449 - 3176135-3176329,3176531-3177289,3177420-3177905,317... 30 1.7
05_02_0083 + 6450694-6450766,6451391-6451560,6451633-6451704,645... 29 2.3
04_04_1153 - 31294014-31294095,31294180-31294261,31294422-312948... 29 2.3
11_01_0787 + 6578158-6579287,6579439-6580870,6581087-6581097,658... 28 5.3
08_01_0832 - 8101657-8101708,8102581-8102660,8102740-8102910,810... 28 5.3
07_03_1575 - 27848977-27849095,27849254-27849302,27850270-278502... 28 5.3
01_01_0499 - 3675303-3675484,3676888-3676982,3677046-3677096,367... 28 5.3
03_05_0694 + 26844075-26844217,26844417-26844489,26844577-268447... 28 7.0
01_01_1190 + 9463973-9465732,9466210-9466440,9467664-9467793,946... 28 7.0
>02_01_0003 +
13079-13610,14005-14312,14364-14549,14620-14707,
14807-14887,14980-15044,15357-15497,15578-15694,
15995-16237,16326-16383,18127-18224
Length = 638
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/46 (54%), Positives = 32/46 (69%)
Frame = +3
Query: 60 NAEQLDQLKSFVEICKTQPQLLHHPQLAFFKDYLISLGVSLPTATF 197
+A ++ +L++FVE CK P LL P LAFF+DYL SLG LP A F
Sbjct: 227 DASRVGELRTFVEACKKDPSLLADPNLAFFRDYLESLGAHLPAAAF 272
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 305 MEG-VIAPDQTDESQDMGDPNXXXXXXXXXXXXXXXXXAMRAFSEQKYDEAINLYTAAIQ 481
+EG ++ D D Q MGDP+ AM A SE K +EAI+ T AI
Sbjct: 327 LEGDIVESDHQDPPQKMGDPSIDVTEENRDASQEAKSKAMEAMSEGKLEEAIDHLTKAIL 386
Query: 482 LNPQSALLF 508
LNP SA+++
Sbjct: 387 LNPLSAIMY 395
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +1
Query: 514 RGQVYLKLNKPNACIKDCTHALELNCDSAGPYKFRG 621
R V++K+ KP A I+D ALE+N DSA YK RG
Sbjct: 398 RASVFIKMKKPVAAIRDANAALEINPDSAKGYKTRG 433
>09_04_0038 -
13996505-13996836,13997047-13997077,13997307-13997420,
13997546-13997686,13997787-13997851,13997943-13998039,
13998096-13998257,13998360-13998473,14001263-14001311,
14001967-14002047,14003504-14003561,14003671-14004031,
14004129-14004213,14004320-14004591,14004712-14004914,
14005419-14005494
Length = 746
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 481 IKSTECFVVSKRGQVYLKLNKPNACIKDCTHALELNCDSAGPYKFRG 621
+ T + R +++K KPNA I+D AL++N DSA YK RG
Sbjct: 508 LNPTSAIAYATRAVIFVKSKKPNAAIRDADAALKINPDSAKGYKSRG 554
Score = 27.1 bits (57), Expect(2) = 0.96
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 440 KYDEAINLYTAAIQLNPQSALLF 508
K DEAI T AI LNP SA+ +
Sbjct: 494 KLDEAIEHLTEAIVLNPTSAIAY 516
Score = 22.2 bits (45), Expect(2) = 0.96
Identities = 13/46 (28%), Positives = 16/46 (34%)
Frame = +2
Query: 305 MEGVIAPDQTDESQDMGDPNXXXXXXXXXXXXXXXXXAMRAFSEQK 442
+EG D Q MGDP+ + AFSE K
Sbjct: 419 LEGEAVEPDNDPPQKMGDPSVEVSDEKRDQAQLCKNKGVDAFSEGK 464
>02_05_0110 +
25914110-25915006,25915726-25915797,25916411-25916699,
25916864-25916949,25917267-25917490,25917674-25917740,
25917830-25917889,25917995-25918078,25918475-25918555
Length = 619
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 428 FSEQKYDEAINLYTAAIQLNPQSALLFLNGDRC 526
F EQKY +A+ YT AI+ NP+ ++ N C
Sbjct: 424 FKEQKYPDAVKHYTEAIRRNPKDPKVYSNRAAC 456
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 425 AFSEQKYDEAINLYTAAIQLNPQSALLFLN 514
AFS +Y+EA +T AI L P + +L+ N
Sbjct: 12 AFSAGRYEEAARHFTDAIALAPGNHVLYSN 41
>12_02_1010 +
25269721-25269787,25270162-25270308,25270407-25270783,
25271273-25271407,25272059-25272211,25272761-25272862,
25273380-25273550,25273659-25273738,25273860-25273917
Length = 429
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 416 AMRAFSEQKYDEAINLYTAAIQLNPQSALLFLNGDRC 526
A AF+E +Y AI YT A++ P A LF N C
Sbjct: 309 AKEAFAEGEYITAIYFYTKALEKAPLDATLFANRSLC 345
>10_08_0435 +
17905728-17905901,17906608-17906931,17907205-17907321,
17908418-17908597,17909064-17909190,17909327-17909440,
17909794-17909909
Length = 383
Score = 32.3 bits (70), Expect = 0.32
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 508 SKRGQVYLKLNKPNACIKDCTHALELN 588
S R +LKL K + IK+CT ALELN
Sbjct: 256 SNRAVCFLKLGKYDETIKECTKALELN 282
>03_05_0859 -
28329837-28329919,28330062-28330131,28330498-28330549,
28330671-28330798,28331283-28331483,28332183-28332317,
28333116-28333275,28333824-28334019,28334070-28334252,
28334382-28334507,28335090-28335214,28335389-28335541,
28337267-28337472
Length = 605
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 425 AFSEQKYDEAINLYTAAIQLNPQSALLFLN 514
AF E+++ +AIN YT AI+LN + A + N
Sbjct: 499 AFKEKQWQKAINFYTEAIKLNNKVATYYSN 528
>03_05_0688 +
26762668-26762893,26763027-26763101,26763865-26764032,
26764983-26765114,26765538-26765677,26765840-26765908,
26766325-26766435,26766854-26766973,26768223-26768324,
26769608-26769778,26769865-26769944,26770119-26770182
Length = 485
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 422 RAFSEQKYDEAINLYTAAIQLNPQSALLFLNGDRC 526
+AF E Y AI YT A++L+P A L+ N C
Sbjct: 365 KAFEEGDYAGAIIFYTEAMKLDPADATLYSNRSLC 399
>04_04_0639 +
26883810-26883821,26884131-26884307,26885276-26885339,
26886614-26887734,26888193-26888481,26888528-26888658,
26888910-26889133,26889220-26889286,26889744-26889803,
26889896-26889979,26890290-26890301
Length = 746
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 428 FSEQKYDEAINLYTAAIQLNPQSALLFLNGDRC 526
F +QKY EA+ Y+ A++ NP+ ++ N C
Sbjct: 574 FKQQKYPEAVKHYSEALRRNPKDPRVYSNRAAC 606
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 505 VSKRGQVYLKLNKPNACIKDCTHALELNCDSAGPYKFRGR 624
++ R VYL++ K + CI DC A+E + +K R
Sbjct: 446 LTNRAAVYLEMGKYDECINDCDKAVERGRELHADFKIISR 485
>06_01_0449 -
3176135-3176329,3176531-3177289,3177420-3177905,
3178302-3178421,3178637-3178703,3178784-3179007,
3179149-3179234,3179936-3180509
Length = 836
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 428 FSEQKYDEAINLYTAAIQLNPQSALLFLNGDRC 526
F +++Y EA YT A++ NP+ +F N +C
Sbjct: 196 FKQKRYQEAAMHYTEAMKKNPKDPRVFSNRAQC 228
>05_02_0083 +
6450694-6450766,6451391-6451560,6451633-6451704,
6451893-6452043,6452709-6452817,6452906-6453023,
6453214-6453361,6453520-6453768,6454209-6454334,
6454474-6454574,6454728-6454802,6455160-6455219
Length = 483
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 425 AFSEQKYDEAINLYTAAIQLNPQSALLFLN 514
AF K+ AI LY+ AI+LN +A+ + N
Sbjct: 22 AFKANKFSLAIELYSQAIELNSSNAVYWAN 51
>04_04_1153 -
31294014-31294095,31294180-31294261,31294422-31294857,
31295124-31295312,31296190-31296360
Length = 319
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 508 SKRGQVYLKLNKPNACIKDCTHALELNCDSAGPYKFRGR 624
S R YLKL+ + ++CT LEL+ + AG R +
Sbjct: 43 SNRAACYLKLHDFHKAAEECTSVLELDREHAGALMLRAQ 81
>11_01_0787 +
6578158-6579287,6579439-6580870,6581087-6581097,
6581525-6582125,6583981-6585054,6585745-6585873,
6585925-6585963
Length = 1471
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 201 AKDFTAAGDKKSSNEEKVNRHLTRNR-SLNQM*N*IWKVS*LLIKQTNLKTWVIQTRR 371
AKD A +K +N ++ + + R L M N IWK+S + +K W+ + R+
Sbjct: 21 AKDLLAKLSEKVNNLRDLDEKIEQMRMQLATMNNVIWKISMTCLTDEVVKGWIGEVRK 78
>08_01_0832 -
8101657-8101708,8102581-8102660,8102740-8102910,
8104181-8104282,8105245-8105346,8106246-8106374,
8106521-8106565,8109387-8109502,8109602-8109670,
8109756-8109801
Length = 303
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 422 RAFSEQKYDEAINLYTAAIQLNPQSALLFLNGDRC 526
+A + Y A YT A+ L+P A LF N C
Sbjct: 187 KAVDREDYISASAFYTKAMDLDPNDATLFSNRSLC 221
>07_03_1575 -
27848977-27849095,27849254-27849302,27850270-27850287,
27850798-27851786,27852119-27852733,27852893-27852921,
27853990-27854453,27854530-27854654,27854743-27855025,
27855112-27856102,27856965-27857576,27857666-27858630
Length = 1752
Score = 28.3 bits (60), Expect = 5.3
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 175 TPRDIR*SLKNANCGWCNSC 116
T + + L+ CGWCNSC
Sbjct: 756 TDQKLSVELRKEKCGWCNSC 775
>01_01_0499 -
3675303-3675484,3676888-3676982,3677046-3677096,
3677191-3677270,3677423-3677593,3677836-3677937,
3678092-3678244,3678392-3678523,3678702-3678788,
3678987-3679126,3679246-3679660
Length = 535
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 425 AFSEQKYDEAINLYTAAIQLNPQSALLFLNGDRC 526
+F+ + YD AI LY+ A++ + A L+ N C
Sbjct: 328 SFNNEDYDAAILLYSMAMKFDNTDAKLYSNRSAC 361
>03_05_0694 +
26844075-26844217,26844417-26844489,26844577-26844781,
26845516-26845655,26846858-26846983,26847455-26847622,
26848486-26848650,26849433-26849594,26849682-26849761,
26849975-26850038
Length = 441
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 422 RAFSEQKYDEAINLYTAAIQLNPQSALLFLNGDRC 526
+A + Y A YT AI+L+P A L+ N C
Sbjct: 324 KAVKRKDYHGASIFYTEAIELDPTDATLYSNRSLC 358
>01_01_1190 +
9463973-9465732,9466210-9466440,9467664-9467793,
9468723-9468888,9469528-9469859,9470284-9470513,
9471535-9471613,9471689-9471865
Length = 1034
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 422 RAFSEQKYDEAINLYTAAIQLNPQS 496
+AF KY EA+ YTAA+ N +S
Sbjct: 809 KAFQAGKYSEAVEHYTAALLSNTES 833
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,697,044
Number of Sequences: 37544
Number of extensions: 260796
Number of successful extensions: 543
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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