Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10467
(718 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 51 1e-06
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 46 4e-05
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 41 0.001
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 41 0.001
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 40 0.002
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 39 0.004
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 38 0.008
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 37 0.019
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 36 0.025
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.025
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.043
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.043
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 33 0.23
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.53
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.71
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 31 0.93
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 30 2.2
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 30 2.2
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 30 2.2
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 29 2.8
SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7) 29 2.8
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 29 5.0
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 5.0
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_39605| Best HMM Match : zf-TRAF (HMM E-Value=5.3e-39) 28 6.6
SB_34575| Best HMM Match : zf-TRAF (HMM E-Value=2.5e-15) 28 6.6
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 28 6.6
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 28 6.6
SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35) 28 6.6
SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 8.7
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 99 bits (238), Expect = 2e-21
Identities = 52/90 (57%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Frame = +3
Query: 237 GLPGWRISAAVSKTAVAPNERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLS 413
GL G +A +SKTA AP ERVKLL+Q Q + K D YKG++D R + +G LS
Sbjct: 14 GLSG--AAAIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEGFLS 71
Query: 414 FWRGNFANVIRYFPTQALNFAFKDKYKQVF 503
FWRGN AN IRYFPTQALNFAFKD+ K +F
Sbjct: 72 FWRGNLANCIRYFPTQALNFAFKDQVKALF 101
Score = 41.1 bits (92), Expect = 9e-04
Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Frame = +2
Query: 584 SLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGKLHQQDL 700
SL FVY LD+ RTRLA D VGK G+R+F+G+ ++++ +
Sbjct: 127 SLFFVYSLDYCRTRLANDAKVGKKGGERQFNGMIDVYKKTI 167
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/51 (31%), Positives = 32/51 (62%)
Frame = +3
Query: 354 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 506
+YKG +D ++I K++G +S +G AN++R + F DK+K++++
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKELYV 297
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 74.1 bits (174), Expect = 1e-13
Identities = 35/81 (43%), Positives = 57/81 (70%)
Frame = +3
Query: 255 ISAAVSKTAVAPNERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 434
I+ AVS+T+V+P ERVK+LLQ+Q + ++KG++ ++I KE+G+L +++GN
Sbjct: 43 IAGAVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILGYFKGNGT 96
Query: 435 NVIRYFPTQALNFAFKDKYKQ 497
NVIR FP A+ FA ++YK+
Sbjct: 97 NVIRIFPYSAVQFAAYEEYKK 117
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 60.1 bits (139), Expect = 2e-09
Identities = 39/98 (39%), Positives = 58/98 (59%)
Frame = +3
Query: 261 AAVSKTAVAPNERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 440
A VS+TA AP +R+K+LLQVQ A+ GIV F + +E G+ S WRGN ANV
Sbjct: 147 AGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGNGANV 200
Query: 441 IRYFPTQALNFAFKDKYKQVFLGALTRRRSSGVTSLVI 554
I+ P + F +K K++ +G+ T ++ GVT ++
Sbjct: 201 IKIAPESGIKFFAYEKAKKL-VGSDT--KALGVTDRLL 235
Score = 35.1 bits (77), Expect = 0.057
Identities = 20/84 (23%), Positives = 44/84 (52%)
Frame = +3
Query: 255 ISAAVSKTAVAPNERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 434
++ S+T++ P E +K L ++ + Y+G++ A I +++G+ SF+RG F
Sbjct: 239 MAGVASQTSIYPLEVLKTRLAIRKTGQ-------YRGLLHAASVIYQKEGIRSFYRGLFP 291
Query: 435 NVIRYFPTQALNFAFKDKYKQVFL 506
+++ P ++ A + K +L
Sbjct: 292 SLLGIIPYAGIDLAVYETLKNFYL 315
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 50.8 bits (116), Expect = 1e-06
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +3
Query: 258 SAAVSKTAVAPNERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 422
+A +SKTA AP ERVKLL+Q Q + K YKG+VD +R + +G+ SFWR
Sbjct: 20 AAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDCTMRTYRAEGIGSFWR 75
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +3
Query: 258 SAAVSKTAVAPNERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 437
SA ++++ +P E VK+L QV + G++ F + K +G+ +FW+GN +
Sbjct: 68 SAVLARSLTSPLEVVKVLAQV-------GTQEAKPGLIRTFASVYKREGIKAFWKGNGVS 120
Query: 438 VIRYFPTQALNFA 476
IR FP A+ +A
Sbjct: 121 CIRLFPYSAVQYA 133
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = +3
Query: 258 SAAVSKTAVAPNERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 437
S ++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++G +
Sbjct: 162 STLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKGVTPS 218
Query: 438 VIRYFP 455
+ FP
Sbjct: 219 FLGLFP 224
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/83 (26%), Positives = 40/83 (48%)
Frame = +3
Query: 255 ISAAVSKTAVAPNERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 434
I A TAV P + VK +Q Q + A++ YK +D F ++ + +G + +RG
Sbjct: 922 IKKATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLP 979
Query: 435 NVIRYFPTQALNFAFKDKYKQVF 503
++ P +A+ D + +F
Sbjct: 980 QLLGVSPEKAIKLTTNDFVRGIF 1002
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Frame = +3
Query: 282 VAPNERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 461
+AP + VK+ LQ+Q +K+ + Y+G VD V++ + +GL ++GN +R P
Sbjct: 51 IAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGF 109
Query: 462 ALNFA----FKDKYKQVF--LGALTRRRSSGVTSLVIW 557
A+ F D + +F G T + G +V W
Sbjct: 110 AVYFGVYELLCDWFSNLFGSRGVATYLMAGGFAGVVSW 147
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 354 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 473
RYKG++D ++ KE+G++ F RG + ++R F Q L F
Sbjct: 170 RYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGF-LQVLRF 208
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +3
Query: 354 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 497
+Y G+ +I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +3
Query: 339 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 503
I ++Y G+++AF RI +++G+ +F+RG +I P ++F + K+ F
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCKKAF 73
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +3
Query: 258 SAAVSKTAVAPNERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 425
S ++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++G
Sbjct: 431 STLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKG 483
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 357 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 506
Y + +A R+ KE+G+L+ WRG +R A A + KQ+ L
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLL 84
Score = 35.9 bits (79), Expect = 0.033
Identities = 21/78 (26%), Positives = 33/78 (42%)
Frame = +3
Query: 255 ISAAVSKTAVAPNERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 434
IS + A P + K +Q + I YKG +D RI + +G+ + W+G
Sbjct: 102 ISGLATTVASMPVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALWKGFTP 158
Query: 435 NVIRYFPTQALNFAFKDK 488
R P L F F ++
Sbjct: 159 YYFRIGPHTVLTFIFLEQ 176
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 285 APNERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 425
AP ERVK LLQVQ K+ RY+G+ D +++ + GL ++G
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 36.3 bits (80), Expect = 0.025
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 366 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 500
++ AF I + +GLL++++GN A ++R FP A+ F + Y +V
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 35.9 bits (79), Expect = 0.033
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +3
Query: 255 ISAAVSKTAVAPNERVKLLLQVQ---HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 425
+S +SK + P + +K +QVQ + Q+Y G+ D F I KE+G + ++G
Sbjct: 38 LSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLFKG 97
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 35.5 bits (78), Expect = 0.043
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 ISAAVSKTAVA-PNERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 431
+S+ V +A+A P + VK+ Q + + I YK + AF +I K++G L W G
Sbjct: 122 VSSGVIGSAIATPTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLWTGMK 177
Query: 432 ANVIRYFPTQALNFAFKDKYKQVFLGA 512
V R D K + L A
Sbjct: 178 PTVKRAACISGTQIPTYDHTKHLLLNA 204
Score = 28.7 bits (61), Expect = 5.0
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Frame = +3
Query: 147 AATPTSTYSPSEDHI--IEQNVEPRRSGRVR*GLPGWRISAAVSKTAVAPNERVKLLLQV 320
AA + T P+ DH + N E R G V L ++ V+ +P + V+
Sbjct: 183 AACISGTQIPTYDHTKHLLLNAELMREG-VALHLASALVAGFVATCVASPVDIVRTRFMT 241
Query: 321 QHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 446
Q + Y+G +D + + +G+L+ ++G F N R
Sbjct: 242 QPKDTK-GRPLVYQGTLDCIYKTVRHEGILALYKGFFPNWTR 282
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 35.5 bits (78), Expect = 0.043
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 369 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 494
+DA ++IP+ +GL S WRG ++ P + F D+ K
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK 105
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 387 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 500
+P+E L W G F++VI F A+N AF+++YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +3
Query: 387 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGALTRRRSSG 536
+P+E +L W G ++VI F A+N F+D+YK++ L R R SG
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL----LRRMRRSG 184
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +3
Query: 387 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGALTRRRSSGV 539
+P+E L + G ++VI F A+N F+++YK+VF A R R+S V
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVFRIATFRGRNSAV 313
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 31.9 bits (69), Expect = 0.53
Identities = 19/70 (27%), Positives = 30/70 (42%)
Frame = +3
Query: 255 ISAAVSKTAVAPNERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 434
I+ +S P + VK Q + +Y G D +I G+ +F +G A
Sbjct: 366 IAGTLSWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQGLLA 425
Query: 435 NVIRYFPTQA 464
++R FPT A
Sbjct: 426 TILRGFPTNA 435
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 31.5 bits (68), Expect = 0.71
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +3
Query: 255 ISAAVSKTAVAPNERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 434
+S + A P + +K+ LQ + K +KG +D F++ + +GL ++G +
Sbjct: 29 VSGMLGCAAGQPLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLRGLYKGMLS 87
Query: 435 NVIRYFPTQALNF 473
++ P+ AL F
Sbjct: 88 PLLMATPSTALTF 100
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 31.1 bits (67), Expect = 0.93
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +3
Query: 270 SKTAVAPNERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 428
S+ VA ER +L+ Q Q +D RY+G +D+F + +G L +RG+
Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRGD 330
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 282 VAPNERVKLLLQVQHVSKQIAADQRYK-GIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 455
+ P E +K LQ QH + I+ K G++D ++I + G +RG A R P
Sbjct: 124 LCPAELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFRGMTATWAREVP 182
>SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -3
Query: 638 HRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTASSCQRP 507
+ RD RS+ +R++ RWL R R+P S+ R++S+ P
Sbjct: 6 NNNRDN-TRSQVRSRNSNRWLLRQQRQPQRHLSHKRSSSNSCSP 48
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +3
Query: 255 ISAAVSKTAVAPNERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 434
++ + AV P + +K LQ+ + + + Y GI+D +I +GL +F++G
Sbjct: 214 LAGMTASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKGAVP 270
Query: 435 NVIRYFP 455
+I P
Sbjct: 271 RMIVIAP 277
>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
Length = 54
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +3
Query: 363 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 500
G+V + G +RGN A ++R P ++ F ++YK++
Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Frame = +3
Query: 243 PGWRISAAVSKTAVA-----PNERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 407
P WR + + VA P + V+ L VQ +S + ++ Y GIV A RI E+G+
Sbjct: 28 PLWRFVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGI 85
Query: 408 LSFWRGNFANVIRYFP 455
++G +++ P
Sbjct: 86 RGLYKGLVPSLVSIAP 101
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 387 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGALTRRRSSG 536
+P+E +L + G ++VI F A+N FK++YK++ T R G
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKILRPRCTGRIVEG 316
>SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 272
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -2
Query: 675 RPENSRWPSPLPTSAARRVRAKSRGYTK 592
RP +SR S P+SA+RR ++SRG +
Sbjct: 221 RPSSSRPSSARPSSASRRASSRSRGLAR 248
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 308 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 409
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 308 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 409
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +3
Query: 357 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 473
Y+G++ + KE+G+ +F+R + P Q L+F
Sbjct: 32 YRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHF 70
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 308 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 409
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 390 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 506
P+E L W G ++VI F +N F++++K+++L
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853
>SB_39605| Best HMM Match : zf-TRAF (HMM E-Value=5.3e-39)
Length = 684
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = -3
Query: 689 DAVFRDRRIHAGHLPYRHRRRDGY-VRSRGGTRSTERWLRRHHRRPDYQRSNARTASSCQ 513
+ VFRDR+ H P +RR+ R+ T R+ + H R + R+ + Q
Sbjct: 256 EIVFRDRQDHLRRCPVYNRRQPATPSRANKSNSPTVRFEVQQHTRQQHSRTRSSNERENQ 315
Query: 512 RP 507
P
Sbjct: 316 MP 317
>SB_34575| Best HMM Match : zf-TRAF (HMM E-Value=2.5e-15)
Length = 262
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = -3
Query: 689 DAVFRDRRIHAGHLPYRHRRRDGY-VRSRGGTRSTERWLRRHHRRPDYQRSNARTASSCQ 513
+ VFRDR+ H P +RR+ R+ T R+ + H R + R+ + Q
Sbjct: 171 EIVFRDRQDHLRRCPVYNRRQPATPSRANKSNSPTVRFEVQQHTRQQHSRTRSSNERENQ 230
Query: 512 RP 507
P
Sbjct: 231 MP 232
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 308 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 409
A+ S RQQ R RP GY +R R +P+ SP
Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +3
Query: 288 PNERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 467
P E VK LQ+ + AA Y+G +D + K G+L +RG + + P ++
Sbjct: 60 PTEYVKTQLQLD----EKAAKPIYRGPIDCVKKTVKGHGVLGLYRGLSSLLYGSVPKASV 115
Query: 468 NFA 476
FA
Sbjct: 116 RFA 118
>SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1277
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 629 RDGYVRSRGGTRSTERWLRRHHRRPDY-QRSNARTASSCQR 510
+DG V +RG TR + R H RR + R + R +S+ R
Sbjct: 591 QDGQVTTRGHTRRSSNTTRSHTRRSSHTTRGHTRRSSNTTR 631
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/73 (23%), Positives = 32/73 (43%)
Frame = +3
Query: 255 ISAAVSKTAVAPNERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 434
IS ++ + P+E + L+ Q + Q+Y+ + +E+G + G
Sbjct: 940 ISKCIATSLCYPHEVARTRLRQQE--SEFLGRQKYRSFFQTLGTVLREEGWRGLYGGLGT 997
Query: 435 NVIRYFPTQALNF 473
+VIR P A+ F
Sbjct: 998 HVIRQVPNTAIMF 1010
>SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)
Length = 965
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 254 PPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 129
PP R +A + + FD+ + I TR RGG ++ WG+
Sbjct: 541 PPDRTEVAPSFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 581
>SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 792
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +3
Query: 36 ISKKAHTYPLCSRDYEITPNLLFKNQELV----FRDPPSACAATPTSTYSPS 179
++ ++ Y C + E +P + + ++D SAC A P TY PS
Sbjct: 106 LTDESELYGYCQSNGEWSPAMYTSRHRCMCHAGYQDTVSACTACPRGTYKPS 157
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,407,660
Number of Sequences: 59808
Number of extensions: 455124
Number of successful extensions: 1429
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1423
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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