Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10465
(815 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160... 111 5e-25
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164... 111 5e-25
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171... 111 5e-25
02_01_0076 + 540182-540583,541266-541475,541557-542018,542112-54... 31 0.83
09_04_0351 + 16904075-16904738,16906285-16906366,16906533-169066... 30 2.5
06_01_0080 + 644021-645463 30 2.5
03_02_0966 + 12783515-12783901 30 2.5
12_02_0346 - 17776871-17781445 29 3.3
12_02_0343 - 17748882-17753396 29 3.3
07_01_0115 + 851505-852368,852611-852730,853000-853020,853253-85... 29 4.4
06_01_0349 + 2529279-2530446,2532232-2533036,2533066-2533106,253... 29 4.4
06_01_0486 - 3455030-3455770 29 5.8
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 29 5.8
03_05_0968 + 29277122-29277445,29278389-29278505,29278957-292791... 29 5.8
01_06_1014 - 33810112-33811995 29 5.8
>12_01_0211 -
1601129-1601272,1601670-1602062,1602142-1602240,
1602920-1602988,1603071-1603328
Length = 320
Score = 111 bits (268), Expect = 5e-25
Identities = 52/90 (57%), Positives = 69/90 (76%)
Frame = +2
Query: 254 QLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHI 433
++ + KV APAR G +AP+ VV+P NTGL P +TSFFQ L+IPTKI+KGT+EII V +
Sbjct: 104 EVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVEL 163
Query: 434 LKPGDKVGASEATLLNMLNISPFSYVLLLS 523
+K GDKVG+SE+ LL L I PFSY L+++
Sbjct: 164 IKKGDKVGSSESALLAKLGIRPFSYGLVIT 193
Score = 103 bits (246), Expect = 2e-22
Identities = 52/92 (56%), Positives = 65/92 (70%), Gaps = 2/92 (2%)
Frame = +3
Query: 3 IIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDN--NPA 176
+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R+ IK H DN N
Sbjct: 18 LCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHADNTGNKD 77
Query: 177 LEKLLPHIKGNVGFVFTRGDLVEVRDNCWRTK 272
+L+P + GNVG +FT+GDL EVR+ + K
Sbjct: 78 FLELMPLLVGNVGLIFTKGDLKEVREEVAKYK 109
Score = 89.4 bits (212), Expect = 3e-18
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +1
Query: 511 LVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFK 690
LV+ VYDSG++F+PE+LD+ EDL KF +GV+ VA++SLAI YPTIA+APH NG+K
Sbjct: 190 LVITNVYDSGSVFSPEVLDLTEEDLMEKFASGVSMVASVSLAISYPTIAAAPHMFLNGYK 249
Query: 691 NLLXXXXXXXXXXXXXXXXKEFIK 762
N+L KE++K
Sbjct: 250 NVLAVAVETEYSYPHADKIKEYLK 273
>11_01_0210 -
1647922-1648065,1648459-1648851,1648930-1649028,
1649706-1649774,1649877-1650134
Length = 320
Score = 111 bits (268), Expect = 5e-25
Identities = 52/90 (57%), Positives = 69/90 (76%)
Frame = +2
Query: 254 QLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHI 433
++ + KV APAR G +AP+ VV+P NTGL P +TSFFQ L+IPTKI+KGT+EII V +
Sbjct: 104 EVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVEL 163
Query: 434 LKPGDKVGASEATLLNMLNISPFSYVLLLS 523
+K GDKVG+SE+ LL L I PFSY L+++
Sbjct: 164 IKKGDKVGSSESALLAKLGIRPFSYGLVIT 193
Score = 103 bits (246), Expect = 2e-22
Identities = 52/92 (56%), Positives = 65/92 (70%), Gaps = 2/92 (2%)
Frame = +3
Query: 3 IIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDN--NPA 176
+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R+ IK H DN N
Sbjct: 18 LCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHADNTGNKD 77
Query: 177 LEKLLPHIKGNVGFVFTRGDLVEVRDNCWRTK 272
+L+P + GNVG +FT+GDL EVR+ + K
Sbjct: 78 FLELMPLLVGNVGLIFTKGDLKEVREEVAKYK 109
Score = 89.4 bits (212), Expect = 3e-18
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +1
Query: 511 LVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFK 690
LV+ VYDSG++F+PE+LD+ EDL KF +GV+ VA++SLAI YPTIA+APH NG+K
Sbjct: 190 LVITNVYDSGSVFSPEVLDLTEEDLMEKFASGVSMVASVSLAISYPTIAAAPHMFLNGYK 249
Query: 691 NLLXXXXXXXXXXXXXXXXKEFIK 762
N+L KE++K
Sbjct: 250 NVLAVAVETEYSYPHADKIKEYLK 273
>08_01_0215 -
1714224-1714364,1714795-1715187,1715279-1715377,
1716248-1716316,1716408-1716665
Length = 319
Score = 111 bits (268), Expect = 5e-25
Identities = 52/90 (57%), Positives = 69/90 (76%)
Frame = +2
Query: 254 QLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHI 433
++ + KV APAR G +AP+ VV+P NTGL P +TSFFQ L+IPTKI+KGT+EII V +
Sbjct: 104 EVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVEL 163
Query: 434 LKPGDKVGASEATLLNMLNISPFSYVLLLS 523
+K GDKVG+SE+ LL L I PFSY L+++
Sbjct: 164 IKKGDKVGSSESALLAKLGIRPFSYGLVIT 193
Score = 103 bits (247), Expect = 2e-22
Identities = 52/92 (56%), Positives = 65/92 (70%), Gaps = 2/92 (2%)
Frame = +3
Query: 3 IIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDN--NPA 176
+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R+ IK H DN N
Sbjct: 18 LCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHADNTGNKE 77
Query: 177 LEKLLPHIKGNVGFVFTRGDLVEVRDNCWRTK 272
+L+P + GNVG +FT+GDL EVR+ + K
Sbjct: 78 FLELMPLLVGNVGLIFTKGDLKEVREEVAKYK 109
Score = 88.2 bits (209), Expect = 7e-18
Identities = 40/84 (47%), Positives = 56/84 (66%)
Frame = +1
Query: 511 LVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFK 690
LV+ VYDSG++F+PE+LD+ +DL KF +GV+ VA++SLAI YPTIA+APH NG+K
Sbjct: 190 LVITNVYDSGSVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISYPTIAAAPHMFLNGYK 249
Query: 691 NLLXXXXXXXXXXXXXXXXKEFIK 762
N+L KE++K
Sbjct: 250 NVLAVAVETEYSYPHADKIKEYLK 273
>02_01_0076 +
540182-540583,541266-541475,541557-542018,542112-542222,
542309-542488,543083-543367,544581-544701,544802-544923
Length = 630
Score = 31.5 bits (68), Expect = 0.83
Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Frame = -3
Query: 735 FFKLNLCDSSDGQKVLETIGDGMRG*SNSWVSNSQRKSSYISNSSLELGTEILWFDVQNF 556
FFK CDS D +++ G +G S VS+ + SS++ + T+ ++ +F
Sbjct: 493 FFKGINCDSHDDYVDIQSTGAISQGEQPSLVSSPIKMSSHLEQND---DTQETLQNIASF 549
Query: 555 RCKNSSR---IIYLLNNKTYENGEMFNMLRRVASEAPTLSPGF---KMCTSLMISIVPFE 394
+ S R + + N+ N N L ++ E +SP F ++ S +VP E
Sbjct: 550 QVVMSERGKVVGFQPTNRLAVNHWATNPLTKLLYEGRKISPAFLEPRLRISRPAKVVPVE 609
Query: 393 ILVGMERAWKKEVFSGPRPV 334
+L+ + + F+ RPV
Sbjct: 610 LLMSVN---PESFFALVRPV 626
>09_04_0351 +
16904075-16904738,16906285-16906366,16906533-16906697,
16906811-16906929,16906930-16907156
Length = 418
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 225 TRGDLVEVRDNCWRTKSRLQLVPVPLPHCQSSFPPTT 335
T DL+ V D + ++ VPLP C SSFP T
Sbjct: 195 TATDLMSVNDMATPELAAGDIIVVPLPACTSSFPAFT 231
>06_01_0080 + 644021-645463
Length = 480
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2
Query: 424 IVDDFNSTL*NFGRDGKSLEERGFLWTEAGVVGGND 317
I+D N N R K++EERG L+ GV GG +
Sbjct: 100 IIDGGNEWYENTERREKAMEERGLLYLGMGVSGGEE 135
>03_02_0966 + 12783515-12783901
Length = 128
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 601 AGVANVAALSLAIGYPTIASAPHSIANGFKNLL 699
AG+A VAA++ A+ P +A A +++ KN L
Sbjct: 67 AGIAAVAAVAAALAVPEVAEAAPALSPSLKNFL 99
>12_02_0346 - 17776871-17781445
Length = 1524
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 472 PSQHVEHLSILICLVVKQVYDSGTIFAP 555
P ++HL +L CL Q+ DSG+I P
Sbjct: 1059 PPISLDHLKMLTCLKTLQITDSGSILLP 1086
>12_02_0343 - 17748882-17753396
Length = 1504
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 472 PSQHVEHLSILICLVVKQVYDSGTIFAP 555
P ++HL +L CL Q+ DSG+I P
Sbjct: 1060 PPISLDHLKMLTCLKTLQITDSGSILLP 1087
>07_01_0115 +
851505-852368,852611-852730,853000-853020,853253-853369,
853466-853555,853730-853837,853897-853932,853933-854022
Length = 481
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 574 PEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFK 690
PE RA F AG A V A +P A+A +S GF+
Sbjct: 35 PEKKRASFAAGAAAVRAKVCDARWPASAAAANSAPYGFR 73
>06_01_0349 +
2529279-2530446,2532232-2533036,2533066-2533106,
2533219-2533424
Length = 739
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 6/38 (15%)
Frame = +3
Query: 210 VGFVFTR----GDLVEVRDNC--WRTKSRLQLVPVPLP 305
+G V TR D V +R C WR+ +RLQ +P PLP
Sbjct: 412 LGLVLTRLPSLADRVRLRAVCRPWRSNARLQPLPPPLP 449
>06_01_0486 - 3455030-3455770
Length = 246
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 291 PVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPKF 395
P P P C S PP TP + R P + PS P +
Sbjct: 66 PPPSPRCPSCHPPYTPPT-PRPPPTPPYVPSPPPY 99
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/51 (39%), Positives = 24/51 (47%)
Frame = +3
Query: 291 PVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPKFQRVLLKSSTMYTS*SP 443
P P PH S PP P S + LSSKL P P+ S+T T+ P
Sbjct: 51 PPPPPHRPSPSPPPNPLS-SKLWLSSKLSPPPPETLEQPEPSTTTTTTTPP 100
>03_05_0968 +
29277122-29277445,29278389-29278505,29278957-29279114,
29279678-29279727,29279968-29280161,29280867-29281049,
29281152-29281270,29281383-29281522,29281857-29281937,
29282286-29282389
Length = 489
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 227 GEHEANVALDVWQQFLEGWIVVQVVFDGFAHH 132
G HEA+ L W+ + GW + F GFA H
Sbjct: 189 GNHEASNYL--WELYYGGWAAPNIYFLGFAGH 218
>01_06_1014 - 33810112-33811995
Length = 627
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +3
Query: 270 KSRLQLVPVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPK--FQRVLLKSSTMYT 431
K R++L P+ +P + S PP PAS K L + + + +R +L++STM T
Sbjct: 104 KDRMKL-PLHVPVIKPSVPPLLPASSPAKLLPANVSEEWRRLEIERKILENSTMST 158
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,159,190
Number of Sequences: 37544
Number of extensions: 590062
Number of successful extensions: 1903
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1899
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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