Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10459
         (796 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0036 + 3217163-3217584,3217752-3218322                           30   1.8  
02_05_0244 - 27130502-27130843,27130914-27131019,27132170-27132411     30   1.8  
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703...    30   2.4  
04_04_1183 - 31537196-31537290,31537665-31537986,31538176-315382...    30   2.4  
11_06_0294 + 22022630-22024006,22024109-22024234,22024319-220244...    29   3.2  
11_06_0278 - 21854859-21855101,21855529-21855587,21855684-218557...    29   3.2  
08_02_0934 + 22747742-22748644                                         28   7.4  
06_01_0092 - 775290-775691                                             28   9.8  

>09_02_0036 + 3217163-3217584,3217752-3218322
          Length = 330

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +2

Query: 65  ITIHWPSFYNVV-TGKTLALPNLIALQH 145
           I+  W  F N+V +G TL++PN + LQH
Sbjct: 69  ISAGWSRFINLVQSGPTLSIPNYVLLQH 96


>02_05_0244 - 27130502-27130843,27130914-27131019,27132170-27132411
          Length = 229

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -1

Query: 613 RPSARSFRFLPFLSRHVRRLSPSSSKSGAP 524
           R SA   R+ PFLSR  +R S  S+ SG P
Sbjct: 191 RRSATDGRYAPFLSRQPQRSSAGSTHSGKP 220


>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
            10470975-10471666,10471912-10472062,10473797-10473864,
            10473964-10474042,10474763-10474765,10476427-10477255
          Length = 1349

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -1

Query: 625  YTCQRPSA-RSFRFLPFLSRHVRRLSPSSSK 536
            Y CQ P   ++FRF+   SRH R+   SS K
Sbjct: 1313 YECQEPGCGQTFRFVSDFSRHKRKTGHSSDK 1343


>04_04_1183 - 31537196-31537290,31537665-31537986,31538176-31538277,
            31538826-31539071,31539385-31539506,31539588-31540344,
            31540447-31540770,31540872-31541052,31541208-31541602,
            31541877-31541942,31542225-31542377,31542593-31542691,
            31542776-31542982,31543432-31543572,31543852-31544019,
            31544302-31544395,31544479-31544585,31545140-31545274,
            31545549-31545656,31545975-31546049,31546197-31546262,
            31546500-31546556,31546678-31546702,31546809-31546889,
            31546966-31547080,31547211-31547370,31547444-31547483,
            31547599-31547780,31547905-31548234
          Length = 1650

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = -2

Query: 363  HSTLSRSILLIYKGFCRFRPIG*KMS*FNKNLTRILKNINAYNLPFAIQAAQLLGRAIGA 184
            H  + RSIL     F    P+G  ++ F+K+L  I +N+  +   F  Q +QLL   +  
Sbjct: 1018 HDAMLRSILRAPMVFFHTNPLGRIINRFSKDLGDIDRNVAIFVNMFMAQISQLLSTFVLI 1077

Query: 183  GL 178
            G+
Sbjct: 1078 GI 1079


>11_06_0294 +
           22022630-22024006,22024109-22024234,22024319-22024423,
           22024525-22024659,22024798-22024847,22026487-22026545,
           22026819-22026928,22027941-22028174,22028278-22028377,
           22028699-22028829,22029834-22029914,22029970-22030128
          Length = 888

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 127 LNRLAAHPPFASWRNSEEARTDRPSQQLRSLNG 225
           L+R +   PF SW N  +A  D+ +  L  LNG
Sbjct: 399 LSRPSRQDPFTSWDNMRQACLDKGTHALGKLNG 431


>11_06_0278 -
           21854859-21855101,21855529-21855587,21855684-21855711,
           21855812-21856702,21856792-21857011,21857638-21857687,
           21863174-21863284,21863379-21863483,21863568-21863693,
           21863796-21865187
          Length = 1074

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 127 LNRLAAHPPFASWRNSEEARTDRPSQQLRSLNG 225
           L+R +   PF SW N  +A  D+ +  L  LNG
Sbjct: 404 LSRPSRQDPFTSWDNMRQACLDKGTHALGKLNG 436


>08_02_0934 + 22747742-22748644
          Length = 300

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -1

Query: 613 RPSARSFRFLPFLSRHVRRLSPSSSKSGAPFRVPISALR 497
           +P+  SF  LPF+ R   R  P SS SG    VP + +R
Sbjct: 10  QPNIDSFSQLPFI-RQAAREKPPSSSSGGSVVVPPAPIR 47


>06_01_0092 - 775290-775691
          Length = 133

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = -3

Query: 185 RASSLLRQLAKGGCAARR 132
           RA+SLLRQL + GCAA +
Sbjct: 22  RAASLLRQLIEDGCAAAK 39


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,918,333
Number of Sequences: 37544
Number of extensions: 464350
Number of successful extensions: 1216
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1216
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)