Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10458
         (817 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY160217-1|AAO17576.1|  577|Homo sapiens xenobiotic/medium-chain...    31   6.6  

>AY160217-1|AAO17576.1|  577|Homo sapiens xenobiotic/medium-chain
           fatty acid:CoA ligase protein.
          Length = 577

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -2

Query: 270 DAHCIGTPQVFAWQLFVLHCVRSGALIKPKRYESHARSVL 151
           D   +  P+V  W L +L C+R+G +I P+  +  +  +L
Sbjct: 107 DRVAVMLPRVPEWWLVILGCIRAGLIIMPETIQMKSADIL 146


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,565,280
Number of Sequences: 237096
Number of extensions: 1960024
Number of successful extensions: 6897
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 6815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6896
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)