Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10458
         (817 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr...    28   7.0  

>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical protein
            F29G6.3c protein.
          Length = 1453

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 96   KYTSLPLRKAYWSNYSSKVRQIEHEIH 176
            +Y  LP +K  ++NYSSK  Q+  E H
Sbjct: 1071 QYVPLPPKKDSFANYSSKAPQLPREHH 1097


>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical protein
            F29G6.3b protein.
          Length = 1785

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 96   KYTSLPLRKAYWSNYSSKVRQIEHEIH 176
            +Y  LP +K  ++NYSSK  Q+  E H
Sbjct: 1071 QYVPLPPKKDSFANYSSKAPQLPREHH 1097


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,203,503
Number of Sequences: 27780
Number of extensions: 340058
Number of successful extensions: 837
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)