Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10456
(732 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 146 5e-35
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 146 5e-35
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 146 5e-35
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 146 5e-35
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 146 5e-35
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 146 5e-35
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 146 5e-35
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 119 9e-27
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 100 5e-21
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 97 4e-20
AB061848-1|BAB79486.1| 62|Homo sapiens ribosomal protein L5 pr... 50 1e-05
BC033492-1|AAH33492.2| 753|Homo sapiens SRY (sex determining re... 32 1.8
AB022083-1|BAA37146.1| 753|Homo sapiens SOX30 protein protein. 32 1.8
X76061-1|CAA53661.1| 1139|Homo sapiens 130K protein protein. 32 2.4
X74594-1|CAA52671.1| 1082|Homo sapiens Rb2/p130 protein protein. 32 2.4
S67171-1|AAB29227.1| 1139|Homo sapiens p130 protein. 32 2.4
BX537767-1|CAD97830.1| 849|Homo sapiens hypothetical protein pr... 32 2.4
BC034490-1|AAH34490.1| 1139|Homo sapiens retinoblastoma-like 2 (... 32 2.4
L07810-1|AAA02806.1| 126|Homo sapiens dynamin protein. 31 3.2
L07809-1|AAA02805.1| 131|Homo sapiens dynamin protein. 31 3.2
L07807-1|AAA02803.1| 864|Homo sapiens dynamin protein. 31 3.2
BC063850-1|AAH63850.1| 851|Homo sapiens dynamin 1 protein. 31 3.2
AL590708-18|CAI13837.1| 864|Homo sapiens dynamin 1 protein. 31 3.2
AL590708-17|CAI13839.2| 851|Homo sapiens dynamin 1 protein. 31 3.2
BC050279-1|AAH50279.2| 851|Homo sapiens dynamin 1 protein. 31 5.6
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 146 bits (355), Expect = 5e-35
Identities = 64/83 (77%), Positives = 73/83 (87%)
Frame = +3
Query: 261 DVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 440
+VTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGY
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGY 183
Query: 441 DAESKKFNAEVHRAHIFGLHVAD 509
D+ESK+FNAEVHR HI G +VAD
Sbjct: 184 DSESKEFNAEVHRKHIMGQNVAD 206
Score = 129 bits (311), Expect = 1e-29
Identities = 59/102 (57%), Positives = 74/102 (72%)
Frame = +1
Query: 1 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 180
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYA 96
Query: 181 AAYSTGXXXXXXXXXXXXXDTLYTGQQMSQVMNTMLNLSTMD 306
AAY TG D +Y GQ +V N+ ++D
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQ--VEVTGDEYNVESID 136
Score = 86.2 bits (204), Expect = 1e-16
Identities = 39/73 (53%), Positives = 57/73 (78%)
Frame = +2
Query: 509 YMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQK 688
YMR L ++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K VK+K
Sbjct: 207 YMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKK--PKKEVKKK 264
Query: 689 RWNKRQLTLAERK 727
RWN+ +++LA++K
Sbjct: 265 RWNRPKMSLAQKK 277
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 146 bits (355), Expect = 5e-35
Identities = 64/83 (77%), Positives = 73/83 (87%)
Frame = +3
Query: 261 DVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 440
+VTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGY
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGY 183
Query: 441 DAESKKFNAEVHRAHIFGLHVAD 509
D+ESK+FNAEVHR HI G +VAD
Sbjct: 184 DSESKEFNAEVHRKHIMGQNVAD 206
Score = 131 bits (316), Expect = 3e-30
Identities = 60/102 (58%), Positives = 75/102 (73%)
Frame = +1
Query: 1 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 180
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 181 AAYSTGXXXXXXXXXXXXXDTLYTGQQMSQVMNTMLNLSTMD 306
AAY TG D +Y GQ +V N+ ++D
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQ--VEVTGDEYNVESID 136
Score = 86.2 bits (204), Expect = 1e-16
Identities = 39/73 (53%), Positives = 57/73 (78%)
Frame = +2
Query: 509 YMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQK 688
YMR L ++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K VK+K
Sbjct: 207 YMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKK--PKKEVKKK 264
Query: 689 RWNKRQLTLAERK 727
RWN+ +++LA++K
Sbjct: 265 RWNRPKMSLAQKK 277
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 146 bits (355), Expect = 5e-35
Identities = 64/83 (77%), Positives = 73/83 (87%)
Frame = +3
Query: 261 DVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 440
+VTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGY
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGY 183
Query: 441 DAESKKFNAEVHRAHIFGLHVAD 509
D+ESK+FNAEVHR HI G +VAD
Sbjct: 184 DSESKEFNAEVHRKHIMGQNVAD 206
Score = 131 bits (316), Expect = 3e-30
Identities = 60/102 (58%), Positives = 75/102 (73%)
Frame = +1
Query: 1 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 180
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 181 AAYSTGXXXXXXXXXXXXXDTLYTGQQMSQVMNTMLNLSTMD 306
AAY TG D +Y GQ +V N+ ++D
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQ--VEVTGDEYNVESID 136
Score = 86.2 bits (204), Expect = 1e-16
Identities = 39/73 (53%), Positives = 57/73 (78%)
Frame = +2
Query: 509 YMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQK 688
YMR L ++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K VK+K
Sbjct: 207 YMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKK--PKKEVKKK 264
Query: 689 RWNKRQLTLAERK 727
RWN+ +++LA++K
Sbjct: 265 RWNRPKMSLAQKK 277
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 146 bits (355), Expect = 5e-35
Identities = 64/83 (77%), Positives = 73/83 (87%)
Frame = +3
Query: 261 DVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 440
+VTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGY
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGY 183
Query: 441 DAESKKFNAEVHRAHIFGLHVAD 509
D+ESK+FNAEVHR HI G +VAD
Sbjct: 184 DSESKEFNAEVHRKHIMGQNVAD 206
Score = 131 bits (316), Expect = 3e-30
Identities = 60/102 (58%), Positives = 75/102 (73%)
Frame = +1
Query: 1 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 180
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 181 AAYSTGXXXXXXXXXXXXXDTLYTGQQMSQVMNTMLNLSTMD 306
AAY TG D +Y GQ +V N+ ++D
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQ--VEVTGDEYNVESID 136
Score = 86.6 bits (205), Expect = 8e-17
Identities = 39/73 (53%), Positives = 57/73 (78%)
Frame = +2
Query: 509 YMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQK 688
YMR L ++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K VK+K
Sbjct: 207 YMRCLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKK--PKKEVKKK 264
Query: 689 RWNKRQLTLAERK 727
RWN+ +++LA++K
Sbjct: 265 RWNRPKMSLAQKK 277
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 146 bits (355), Expect = 5e-35
Identities = 64/83 (77%), Positives = 73/83 (87%)
Frame = +3
Query: 261 DVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 440
+VTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGY
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGY 183
Query: 441 DAESKKFNAEVHRAHIFGLHVAD 509
D+ESK+FNAEVHR HI G +VAD
Sbjct: 184 DSESKEFNAEVHRKHIMGQNVAD 206
Score = 131 bits (316), Expect = 3e-30
Identities = 60/102 (58%), Positives = 75/102 (73%)
Frame = +1
Query: 1 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 180
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 181 AAYSTGXXXXXXXXXXXXXDTLYTGQQMSQVMNTMLNLSTMD 306
AAY TG D +Y GQ +V N+ ++D
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQ--VEVTGDEYNVESID 136
Score = 86.2 bits (204), Expect = 1e-16
Identities = 39/73 (53%), Positives = 57/73 (78%)
Frame = +2
Query: 509 YMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQK 688
YMR L ++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K VK+K
Sbjct: 207 YMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKK--PKKEVKKK 264
Query: 689 RWNKRQLTLAERK 727
RWN+ +++LA++K
Sbjct: 265 RWNRPKMSLAQKK 277
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 146 bits (355), Expect = 5e-35
Identities = 64/83 (77%), Positives = 73/83 (87%)
Frame = +3
Query: 261 DVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 440
+VTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGY
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGY 183
Query: 441 DAESKKFNAEVHRAHIFGLHVAD 509
D+ESK+FNAEVHR HI G +VAD
Sbjct: 184 DSESKEFNAEVHRKHIMGQNVAD 206
Score = 131 bits (316), Expect = 3e-30
Identities = 60/102 (58%), Positives = 75/102 (73%)
Frame = +1
Query: 1 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 180
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 181 AAYSTGXXXXXXXXXXXXXDTLYTGQQMSQVMNTMLNLSTMD 306
AAY TG D +Y GQ +V N+ ++D
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQ--VEVTGDEYNVESID 136
Score = 84.6 bits (200), Expect = 3e-16
Identities = 38/73 (52%), Positives = 57/73 (78%)
Frame = +2
Query: 509 YMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQK 688
YMR L ++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K VK++
Sbjct: 207 YMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKK--PKKEVKKE 264
Query: 689 RWNKRQLTLAERK 727
RWN+ +++LA++K
Sbjct: 265 RWNRPKMSLAQKK 277
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 146 bits (355), Expect = 5e-35
Identities = 64/83 (77%), Positives = 73/83 (87%)
Frame = +3
Query: 261 DVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 440
+VTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGY
Sbjct: 131 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGY 190
Query: 441 DAESKKFNAEVHRAHIFGLHVAD 509
D+ESK+FNAEVHR HI G +VAD
Sbjct: 191 DSESKEFNAEVHRKHIMGQNVAD 213
Score = 131 bits (316), Expect = 3e-30
Identities = 60/102 (58%), Positives = 75/102 (73%)
Frame = +1
Query: 1 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 180
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 44 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 103
Query: 181 AAYSTGXXXXXXXXXXXXXDTLYTGQQMSQVMNTMLNLSTMD 306
AAY TG D +Y GQ +V N+ ++D
Sbjct: 104 AAYCTGLLLARRLLNRFGMDKIYEGQ--VEVTGDEYNVESID 143
Score = 82.2 bits (194), Expect = 2e-15
Identities = 39/73 (53%), Positives = 57/73 (78%)
Frame = +2
Query: 509 YMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQK 688
YMR L ++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K VK+K
Sbjct: 214 YMRYLMEEDEDAYKKQFSQYIKNSVTPD-MEEMYKKAHAAIRENPVYEKK--PKKEVKKK 270
Query: 689 RWNKRQLTLAERK 727
RWN+ +++LA++K
Sbjct: 271 RWNRPKMSLAQKK 283
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 119 bits (287), Expect = 9e-27
Identities = 50/62 (80%), Positives = 60/62 (96%)
Frame = +1
Query: 1 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 180
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 181 AA 186
AA
Sbjct: 97 AA 98
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 100 bits (240), Expect = 5e-21
Identities = 47/88 (53%), Positives = 61/88 (69%)
Frame = +1
Query: 43 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 222
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 223 XXXXXDTLYTGQQMSQVMNTMLNLSTMD 306
D +Y GQ +V N+ ++D
Sbjct: 61 NRFGMDKIYEGQ--VEVTGDEYNVESID 86
Score = 95.1 bits (226), Expect = 2e-19
Identities = 40/52 (76%), Positives = 46/52 (88%)
Frame = +3
Query: 261 DVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPH 416
+VTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PH
Sbjct: 74 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPH 125
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 97.5 bits (232), Expect = 4e-20
Identities = 42/54 (77%), Positives = 49/54 (90%)
Frame = +3
Query: 348 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAD 509
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VAD
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVAD 54
Score = 86.2 bits (204), Expect = 1e-16
Identities = 39/73 (53%), Positives = 57/73 (78%)
Frame = +2
Query: 509 YMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQK 688
YMR L ++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K VK+K
Sbjct: 55 YMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKK--PKKEVKKK 112
Query: 689 RWNKRQLTLAERK 727
RWN+ +++LA++K
Sbjct: 113 RWNRPKMSLAQKK 125
>AB061848-1|BAB79486.1| 62|Homo sapiens ribosomal protein L5
protein.
Length = 62
Score = 49.6 bits (113), Expect = 1e-05
Identities = 22/44 (50%), Positives = 34/44 (77%)
Frame = +2
Query: 596 IEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRQLTLAERK 727
+E +YKKAH AIR +P ++KK K VK+KRWN+ +++LA++K
Sbjct: 1 MEEMYKKAHAAIRENPVYEKK--PKKEVKKKRWNRPKMSLAQKK 42
>BC033492-1|AAH33492.2| 753|Homo sapiens SRY (sex determining
region Y)-box 30 protein.
Length = 753
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -3
Query: 409 TLRPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSP 269
T++PP ++P R+ + +A P H+ P PL +TL+ +P
Sbjct: 561 TIQPPREYSSVSPCPRSAPIPQASPIPHPHVYQPPPLGHPATLFGTP 607
>AB022083-1|BAA37146.1| 753|Homo sapiens SOX30 protein protein.
Length = 753
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -3
Query: 409 TLRPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSP 269
T++PP ++P R+ + +A P H+ P PL +TL+ +P
Sbjct: 561 TIQPPREYSSVSPCPRSAPIPQASPIPHPHVYQPPPLGHPATLFGTP 607
>X76061-1|CAA53661.1| 1139|Homo sapiens 130K protein protein.
Length = 1139
Score = 31.9 bits (69), Expect = 2.4
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -3
Query: 262 SVVQCIRCQVQVFEAVF--VLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 116
++++C R Q Q V+ VLI + SD SH N T +NK RT
Sbjct: 911 NIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSPTELNKDRT 961
>X74594-1|CAA52671.1| 1082|Homo sapiens Rb2/p130 protein protein.
Length = 1082
Score = 31.9 bits (69), Expect = 2.4
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -3
Query: 262 SVVQCIRCQVQVFEAVF--VLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 116
++++C R Q Q V+ VLI + SD SH N T +NK RT
Sbjct: 854 NIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSPTELNKDRT 904
>S67171-1|AAB29227.1| 1139|Homo sapiens p130 protein.
Length = 1139
Score = 31.9 bits (69), Expect = 2.4
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -3
Query: 262 SVVQCIRCQVQVFEAVF--VLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 116
++++C R Q Q V+ VLI + SD SH N T +NK RT
Sbjct: 911 NIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSPTELNKDRT 961
>BX537767-1|CAD97830.1| 849|Homo sapiens hypothetical protein
protein.
Length = 849
Score = 31.9 bits (69), Expect = 2.4
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -3
Query: 262 SVVQCIRCQVQVFEAVF--VLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 116
++++C R Q Q V+ VLI + SD SH N T +NK RT
Sbjct: 621 NIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSPTELNKDRT 671
>BC034490-1|AAH34490.1| 1139|Homo sapiens retinoblastoma-like 2 (p130)
protein.
Length = 1139
Score = 31.9 bits (69), Expect = 2.4
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -3
Query: 262 SVVQCIRCQVQVFEAVF--VLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 116
++++C R Q Q V+ VLI + SD SH N T +NK RT
Sbjct: 911 NIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSPTELNKDRT 961
>L07810-1|AAA02806.1| 126|Homo sapiens dynamin protein.
Length = 126
Score = 31.5 bits (68), Expect = 3.2
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = -3
Query: 403 RPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSP 269
R P+++P P+ RAP V A+P S+ APGP GS L +P
Sbjct: 48 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAP 88
>L07809-1|AAA02805.1| 131|Homo sapiens dynamin protein.
Length = 131
Score = 31.5 bits (68), Expect = 3.2
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = -3
Query: 403 RPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSP 269
R P+++P P+ RAP V A+P S+ APGP GS L +P
Sbjct: 48 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAP 88
>L07807-1|AAA02803.1| 864|Homo sapiens dynamin protein.
Length = 864
Score = 31.5 bits (68), Expect = 3.2
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = -3
Query: 403 RPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSP 269
R P+++P P+ RAP V A+P S+ APGP GS L +P
Sbjct: 773 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAP 813
>BC063850-1|AAH63850.1| 851|Homo sapiens dynamin 1 protein.
Length = 851
Score = 31.5 bits (68), Expect = 3.2
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = -3
Query: 403 RPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSP 269
R P+++P P+ RAP V A+P S+ APGP GS L +P
Sbjct: 773 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAP 813
>AL590708-18|CAI13837.1| 864|Homo sapiens dynamin 1 protein.
Length = 864
Score = 31.5 bits (68), Expect = 3.2
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = -3
Query: 403 RPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSP 269
R P+++P P+ RAP V A+P S+ APGP GS L +P
Sbjct: 773 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAP 813
>AL590708-17|CAI13839.2| 851|Homo sapiens dynamin 1 protein.
Length = 851
Score = 31.5 bits (68), Expect = 3.2
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = -3
Query: 403 RPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSP 269
R P+++P P+ RAP V A+P S+ APGP GS L +P
Sbjct: 773 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAP 813
>BC050279-1|AAH50279.2| 851|Homo sapiens dynamin 1 protein.
Length = 851
Score = 30.7 bits (66), Expect = 5.6
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -3
Query: 403 RPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSP 269
R P+++P P+ RAP V A+P S+ APGP GS + +P
Sbjct: 773 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSAMGGAP 813
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,421,437
Number of Sequences: 237096
Number of extensions: 2428715
Number of successful extensions: 5520
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 5104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5510
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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