Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10454
         (824 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         29   0.13 
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    26   1.6  
CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase ...    23   8.6  
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    23   8.6  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 29.5 bits (63), Expect = 0.13
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 541  PNGLGQTLVQDSVIACHVST*SVWEIEAFSCRAIGQ*IKYR 419
            P  L QTL+   + ACH +   + +I+  SC  I Q +K R
Sbjct: 1758 PKELEQTLIDAKIPACHWNLADLPDIKRLSCAEICQLVKER 1798


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +3

Query: 696 PSAICSTASRRLQRRGPTTSVSCHRPKIQENRSANRTQI 812
           P ++  + SR L+   P+T+VS        +  +NR Q+
Sbjct: 180 PGSVVESVSRSLKSGNPSTAVSSSSTNNNTSNISNRNQV 218


>CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase
           protein.
          Length = 573

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 619 DQSEPSTVGSTGLLQGSRDSCG 684
           D + P     TG +QG+ +SCG
Sbjct: 33  DPTRPIIDSPTGQVQGTTESCG 54


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
 Frame = +2

Query: 461 LNFPNRLRGD---VASYDRVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLN 631
           +NF  +L  D   ++S D +L Q LT   G    + + + RL       PS++ V+ + +
Sbjct: 296 VNFIAQLPSDELRLSSIDLLL-QSLTAENGTLVQDPEYVYRLSQLAHAMPSLVDVKAHPD 354

Query: 632 LQQS 643
           LQQS
Sbjct: 355 LQQS 358


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 891,931
Number of Sequences: 2352
Number of extensions: 18056
Number of successful extensions: 50
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)