Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10450
         (817 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ...    41   0.001
U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical pr...    39   0.005
AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical ...    39   0.005
AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical ...    34   0.14 
Z81118-3|CAB03325.1|  346|Caenorhabditis elegans Hypothetical pr...    29   3.0  
AC090999-1|AAK26146.1|  390|Caenorhabditis elegans Hypothetical ...    29   3.0  
U41034-8|AAA82382.1|  669|Caenorhabditis elegans Hypothetical pr...    28   7.0  
AL117203-21|CAN86632.1|  171|Caenorhabditis elegans Hypothetical...    28   7.0  
AL117203-20|CAB55118.1|  244|Caenorhabditis elegans Hypothetical...    28   7.0  
AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacti...    28   7.0  
U88310-3|AAB42337.1|  608|Caenorhabditis elegans Hypothetical pr...    28   9.2  
U53337-2|AAA96184.1|  639|Caenorhabditis elegans Hypothetical pr...    28   9.2  

>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
           protein F21E9.1 protein.
          Length = 1170

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 22/40 (55%), Positives = 29/40 (72%), Gaps = 5/40 (12%)
 Frame = +3

Query: 15  INAGVPQGSVLSPTLFILYINDMLSID-----GMHCYADD 119
           I++GVPQGSV  P LFIL+IN++L ID      + C+ADD
Sbjct: 877 ISSGVPQGSVSGPLLFILFINNLL-IDLAPTINISCFADD 915


>U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical
           protein F31A9.6 protein.
          Length = 358

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 20/37 (54%), Positives = 28/37 (75%), Gaps = 4/37 (10%)
 Frame = +3

Query: 24  GVPQGSVLSPTLFILYINDMLSI--DGMHC--YADDS 122
           GVPQG+VLSP LF +Y+ND+ SI  + + C  +ADD+
Sbjct: 76  GVPQGAVLSPLLFGIYVNDISSILPEKVACKQFADDT 112


>AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical
           protein R11E3.3 protein.
          Length = 931

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = +3

Query: 12  TINAGVPQGSVLSPTLFILYINDMLSIDG--MHCYADDSTGDAR 137
           T+  GVPQGSV+SP LF  Y+ DM +     +  YADD +  AR
Sbjct: 528 TLLGGVPQGSVISPNLFTFYLKDMPTQQDTMLISYADDMSIIAR 571


>AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical
           protein C44B12.7 protein.
          Length = 389

 Score = 33.9 bits (74), Expect = 0.14
 Identities = 13/24 (54%), Positives = 20/24 (83%)
 Frame = +3

Query: 15  INAGVPQGSVLSPTLFILYINDML 86
           I++GVP+GSV  P LF+++IN +L
Sbjct: 53  ISSGVPKGSVSGPFLFLIFINSLL 76


>Z81118-3|CAB03325.1|  346|Caenorhabditis elegans Hypothetical
           protein T10G3.2 protein.
          Length = 346

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = -1

Query: 190 FDRLSCTTLRERL*WPIYRASPVLSSA*QCMPSIDSMSLIYRMKSVGESTEPCGTPA 20
           F ++ C +LR R   P+ R+ P+  S      S+ ++  ++ M   GE+  P G  A
Sbjct: 283 FSQMCCNSLRRR---PVRRSHPISPSPGTSPSSVVTIQNVFGMTLSGEANGPAGQEA 336


>AC090999-1|AAK26146.1|  390|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.8 protein.
          Length = 390

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -1

Query: 82  MSLIYRMKSVGESTEPCGTP 23
           +SL    KS GE T+PCGTP
Sbjct: 50  ISLTNMPKSTGERTDPCGTP 69


>U41034-8|AAA82382.1|  669|Caenorhabditis elegans Hypothetical
           protein M02D8.5 protein.
          Length = 669

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +2

Query: 617 SQCHGSFGTSGSAEGLRFSLY 679
           S C  +F TSG+ +G+RF++Y
Sbjct: 79  SSCSINFSTSGNRQGIRFAVY 99


>AL117203-21|CAN86632.1|  171|Caenorhabditis elegans Hypothetical
           protein Y48C3A.18b protein.
          Length = 171

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 1   LIP*PLTLAFHKVRCSPPRFSSCISMTCCLLMAC 102
           L+P P+TL F ++ C P  F+  +    C +  C
Sbjct: 17  LLPGPVTLMFERLPCLPAEFNPGVVNVACRVPDC 50


>AL117203-20|CAB55118.1|  244|Caenorhabditis elegans Hypothetical
           protein Y48C3A.18a protein.
          Length = 244

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 1   LIP*PLTLAFHKVRCSPPRFSSCISMTCCLLMAC 102
           L+P P+TL F ++ C P  F+  +    C +  C
Sbjct: 90  LLPGPVTLMFERLPCLPAEFNPGVVNVACRVPDC 123


>AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacting
           protein protein 6 protein.
          Length = 1106

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 753 DGKNEMPVSSRTIPQSTPHGTYGTKYREN 667
           DG  E P    TIP+  P   +G K ++N
Sbjct: 185 DGDEETPEQKTTIPKKKPKNAFGGKSKKN 213


>U88310-3|AAB42337.1|  608|Caenorhabditis elegans Hypothetical
           protein C24G7.1 protein.
          Length = 608

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
 Frame = -1

Query: 643 GSKRSVTLGLSTIRTALLCMESNGRSWYLGAPAQRWE-QYSTRGRTVLYKAEAFVQA*SX 467
           G    + LG+S I    +C+  +   W LG   +R E  YS R     +K E  V+    
Sbjct: 500 GGNMGMFLGMSLITITEICLYFSKIIW-LGISKKRREYMYSKRVHEKTHKKE-IVETVEK 557

Query: 466 LRSVEDSQHFGRQLGFAFQMT 404
           ++ +E  +     +GF  Q++
Sbjct: 558 MKVIESKRKLSSPIGFENQIS 578


>U53337-2|AAA96184.1|  639|Caenorhabditis elegans Hypothetical
           protein R02E12.4 protein.
          Length = 639

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 8/119 (6%)
 Frame = -1

Query: 634 RSVTLGLSTIRTALLCMESNGRSWYLGAPAQRWEQYS----TRGRTVLYKAEAFVQA--- 476
           +SV +G    +T +   + +   +  GAP QR  +YS      G  + Y A A V +   
Sbjct: 403 KSVAIGADGTKTVIRTPDGDRLDFREGAPLQRMSEYSEWIENTGNNLNYAARARVHSRKI 462

Query: 475 -*SXLRSVEDSQHFGRQLGFAFQMTPKLDIARNVDPKYPNTLGRLQGYSLELRRHDKGV 302
                +S+ +  H  R    A +   K D  RN      N   ++ G   E++  D  +
Sbjct: 463 GQKLCQSIREMAHQLRTEAIAVEALLK-DSVRNWQEWKDNLHSQVNGKDKEIKNADGAI 520


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,178,686
Number of Sequences: 27780
Number of extensions: 545884
Number of successful extensions: 1567
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1567
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)