Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10449
         (467 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   1.2  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   2.2  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    23   2.2  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    21   6.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   6.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   8.7  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 233 TYYYVIKLKVSDTLILLL 286
           T YY+  L VSD L L+L
Sbjct: 68  TNYYLFNLAVSDLLFLIL 85


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 233 TYYYVIKLKVSDTLILL 283
           T YY+  L VSD L+L+
Sbjct: 88  TNYYLFSLAVSDLLLLI 104


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 233 TYYYVIKLKVSDTLILLL 286
           T YY+  L +SD ++L+L
Sbjct: 75  TNYYLFSLAISDLILLVL 92


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = +1

Query: 268 YANFALDENVLSHYGTNFEMERETILFVVLCYFKINTL 381
           Y N A++  + + +  +F    ++I+    C  + NTL
Sbjct: 52  YCNSAINPCIYALFSKDFRFAFKSIICKCFCKRRTNTL 89


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = +1

Query: 268 YANFALDENVLSHYGTNFEMERETILFVVLCYFKINTL 381
           Y N A++  + + +  +F    ++I+    C  + NTL
Sbjct: 500 YCNSAINPCIYALFSKDFRFAFKSIICKCFCKRRTNTL 537


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 400 YLYIRNYIENKIFQNQ 447
           Y   R YI+ KI +NQ
Sbjct: 772 YELSRGYIDEKILENQ 787


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,161
Number of Sequences: 438
Number of extensions: 2755
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)