Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10446
(779 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 178 3e-45
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 178 3e-45
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 96 2e-20
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 96 2e-20
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 62 4e-10
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 35 0.057
AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical ... 30 2.1
Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical pr... 28 6.5
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 178 bits (434), Expect = 3e-45
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +2
Query: 254 TAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 433
TA+PRL+EPVYL EIQCPE AVGGIYGVLNRRRGHVFEESQV GTPMF+VKAYLPVNESF
Sbjct: 729 TAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESF 788
Query: 434 GFTADLRSNTGGQAFPQCVFDHWQV 508
GFTADLRSNTGGQAFPQCVFDHWQV
Sbjct: 789 GFTADLRSNTGGQAFPQCVFDHWQV 813
Score = 155 bits (376), Expect = 3e-38
Identities = 66/88 (75%), Positives = 78/88 (88%)
Frame = +3
Query: 3 CFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLH 182
CFGP+GTGPN+L+D +KGVQYLNEIKDSVVAGFQWA +EGV+++EN+RGVRFN++DVTLH
Sbjct: 645 CFGPDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLH 704
Query: 183 TDAIHRGGGQIIPTTRRCLYACLLLLSP 266
DAIHRGGGQIIPT RR YA +L P
Sbjct: 705 ADAIHRGGGQIIPTARRVFYASVLTAEP 732
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +1
Query: 508 LPGEPCEPQSKPYNVVQETRKRKGLKEGLP 597
LPG+P E +KP +V +TRKRKGLKEG+P
Sbjct: 814 LPGDPLEAGTKPNQIVLDTRKRKGLKEGVP 843
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 178 bits (434), Expect = 3e-45
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +2
Query: 254 TAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 433
TA+PRL+EPVYL EIQCPE AVGGIYGVLNRRRGHVFEESQV GTPMF+VKAYLPVNESF
Sbjct: 729 TAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESF 788
Query: 434 GFTADLRSNTGGQAFPQCVFDHWQV 508
GFTADLRSNTGGQAFPQCVFDHWQV
Sbjct: 789 GFTADLRSNTGGQAFPQCVFDHWQV 813
Score = 155 bits (376), Expect = 3e-38
Identities = 66/88 (75%), Positives = 78/88 (88%)
Frame = +3
Query: 3 CFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLH 182
CFGP+GTGPN+L+D +KGVQYLNEIKDSVVAGFQWA +EGV+++EN+RGVRFN++DVTLH
Sbjct: 645 CFGPDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLH 704
Query: 183 TDAIHRGGGQIIPTTRRCLYACLLLLSP 266
DAIHRGGGQIIPT RR YA +L P
Sbjct: 705 ADAIHRGGGQIIPTARRVFYASVLTAEP 732
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +1
Query: 508 LPGEPCEPQSKPYNVVQETRKRKGLKEGLP 597
LPG+P E +KP +V +TRKRKGLKEG+P
Sbjct: 814 LPGDPLEAGTKPNQIVLDTRKRKGLKEGVP 843
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 96.3 bits (229), Expect = 2e-20
Identities = 42/84 (50%), Positives = 55/84 (65%)
Frame = +2
Query: 257 AQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFG 436
A PRLMEP Y E+ P V +Y VL +RRGHV ++ + G+PM+ + AY+PV +SFG
Sbjct: 827 ATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSFG 886
Query: 437 FTADLRSNTGGQAFPQCVFDHWQV 508
F DLR +T GQAF F HWQ+
Sbjct: 887 FETDLRIHTQGQAFCMSAFHHWQL 910
Score = 94.3 bits (224), Expect = 9e-20
Identities = 41/91 (45%), Positives = 63/91 (69%), Gaps = 4/91 (4%)
Frame = +3
Query: 6 FGPEGTGPNILVDCSKGVQY----LNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDV 173
FGP+ TGPNIL+D + + L+ +++S+V GFQWA +EG + EE +R V+F + D
Sbjct: 739 FGPDTTGPNILLDDTLPSEVDKHLLSTVRESLVQGFQWATREGPLCEEPIRQVKFKLLDA 798
Query: 174 TLHTDAIHRGGGQIIPTTRRCLYACLLLLSP 266
+ T+ ++RGGGQ+IPT RRC Y+ L+ +P
Sbjct: 799 AIATEPLYRGGGQMIPTARRCAYSAFLMATP 829
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 96.3 bits (229), Expect = 2e-20
Identities = 42/84 (50%), Positives = 55/84 (65%)
Frame = +2
Query: 257 AQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFG 436
A PRLMEP Y E+ P V +Y VL +RRGHV ++ + G+PM+ + AY+PV +SFG
Sbjct: 702 ATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSFG 761
Query: 437 FTADLRSNTGGQAFPQCVFDHWQV 508
F DLR +T GQAF F HWQ+
Sbjct: 762 FETDLRIHTQGQAFCMSAFHHWQL 785
Score = 90.2 bits (214), Expect = 1e-18
Identities = 40/91 (43%), Positives = 62/91 (68%), Gaps = 4/91 (4%)
Frame = +3
Query: 6 FGPEGTGPNILVDCSKGVQY----LNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDV 173
FG + TGPNIL+D + + L+ +++S+V GFQWA +EG + EE +R V+F + D
Sbjct: 614 FGLDTTGPNILLDDTLPSEVDKHLLSTVRESLVQGFQWATREGPLCEEPIRQVKFKLLDA 673
Query: 174 TLHTDAIHRGGGQIIPTTRRCLYACLLLLSP 266
+ T+ ++RGGGQ+IPT RRC Y+ L+ +P
Sbjct: 674 AIATEPLYRGGGQMIPTARRCAYSAFLMATP 704
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 62.1 bits (144), Expect = 4e-10
Identities = 31/81 (38%), Positives = 43/81 (53%)
Frame = +2
Query: 266 RLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTA 445
RL+ +Y C + A+G ++ VL++R+ V E T +F V + +PV ESF F
Sbjct: 753 RLVAAMYRCTVTTASQALGKVHAVLSQRKSKVLSEDINEATNLFEVVSLMPVVESFSFCD 812
Query: 446 DLRSNTGGQAFPQCVFDHWQV 508
LR T G A Q F HWQV
Sbjct: 813 QLRKFTSGMASAQLQFSHWQV 833
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/50 (44%), Positives = 25/50 (50%)
Frame = +2
Query: 359 VFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQV 508
V E T +F V + +PV ESF F LR T G A Q F HWQV
Sbjct: 595 VLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQFSHWQV 644
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 35.1 bits (77), Expect = 0.057
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +2
Query: 269 LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTAD 448
L+EP+ E P G + L +R + G I +A P+++ FG+T++
Sbjct: 642 LLEPIMKVEATVPTEFQGNVVTSLTQRNALITTTDSTEGYATVICEA--PLSDMFGYTSE 699
Query: 449 LRSNTGGQ 472
LRS T G+
Sbjct: 700 LRSLTEGK 707
>AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical
protein T24A6.11 protein.
Length = 359
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -1
Query: 746 LLSHLRVCFNMMRNMCC*K*TCVKRFPYRYVFLICFNYVV 627
+L+ LR+C+ C + TC K FP ++V L+ ++VV
Sbjct: 290 ILTPLRICYTSCLFQHC-QITCQKNFPTKFVDLLSLSHVV 328
>Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical
protein C46F11.2b protein.
Length = 459
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 73 KLRTLLWLDSSGPLRKELWLKRICVVFDST 162
K++TL+W PL KEL L+R+ V D +
Sbjct: 256 KVQTLIWAIGRDPLTKELNLERVGVKTDKS 285
>Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical
protein C46F11.2a protein.
Length = 473
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 73 KLRTLLWLDSSGPLRKELWLKRICVVFDST 162
K++TL+W PL KEL L+R+ V D +
Sbjct: 270 KVQTLIWAIGRDPLTKELNLERVGVKTDKS 299
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,941,359
Number of Sequences: 27780
Number of extensions: 436365
Number of successful extensions: 1198
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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