Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10444X
         (417 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    77   9e-17
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   3.6  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   4.8  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   4.8  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    21   4.8  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   4.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   8.4  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 76.6 bits (180), Expect = 9e-17
 Identities = 34/84 (40%), Positives = 51/84 (60%)
 Frame = +3

Query: 3   QHHIYYIAGSSRAEVEKSPFAERLVXRGYEVLYLTEAVDEXCISSXHEYEGHKFQNIAKE 182
           Q HIYYI G S+ +V  S F ER+  RG+EV+Y+TE +DE  +    E++G    ++ KE
Sbjct: 477 QKHIYYITGESKEQVANSSFVERVKKRGFEVVYMTEPIDEYVVQQMKEFDGKTLVSVTKE 536

Query: 183 IFDLEEGDRAKEKLEAYKKQYEXL 254
             +L E +  K+K E  K ++E L
Sbjct: 537 GLELPEDEEEKKKREEDKAKFEGL 560



 Score = 24.2 bits (50), Expect = 0.52
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 350 FGWTGNMERLALSNA 394
           +GWT NMER+  + A
Sbjct: 593 YGWTANMERIMKAQA 607


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 131 DAXLVHGLGEVQHLVAAXHQAL 66
           D  LV+G G  +H V A +  +
Sbjct: 244 DTILVNGFGRFKHFVGADNSTV 265


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 237 SCRPPASPWRGRLPPGRIFPW 175
           SC  PA+P    +P    +PW
Sbjct: 115 SCSQPAAPGGQPIPDIPRYPW 135


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 237 SCRPPASPWRGRLPPGRIFPW 175
           SC  PA+P    +P    +PW
Sbjct: 174 SCSQPAAPGGQPIPDIPRYPW 194


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 237 SCRPPASPWRGRLPPGRIFPW 175
           SC  PA+P    +P    +PW
Sbjct: 115 SCSQPAAPGGQPIPDIPRYPW 135


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 237 SCRPPASPWRGRLPPGRIFPW 175
           SC  PA+P    +P    +PW
Sbjct: 174 SCSQPAAPGGQPIPDIPRYPW 194


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 237 SCRPPASPWRGRLPPG 190
           S +P   PW+  LP G
Sbjct: 581 SAKPMLKPWQRVLPDG 596


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,883
Number of Sequences: 336
Number of extensions: 902
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)