Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10436
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.5  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.5  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.5  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.5  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.5  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   4.4  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   5.8  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   7.6  

>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 128 DYVFDWNMLKFGGLRD 175
           DY   WN  ++GG++D
Sbjct: 62  DYNLKWNESEYGGVKD 77


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 128 DYVFDWNMLKFGGLRD 175
           DY   WN  ++GG++D
Sbjct: 62  DYNLKWNESEYGGVKD 77


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 128 DYVFDWNMLKFGGLRD 175
           DY   WN  ++GG++D
Sbjct: 62  DYNLKWNESEYGGVKD 77


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 128 DYVFDWNMLKFGGLRD 175
           DY   WN  ++GG++D
Sbjct: 62  DYNLKWNESEYGGVKD 77


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 128 DYVFDWNMLKFGGLRD 175
           DY   WN  ++GG++D
Sbjct: 62  DYNLKWNESEYGGVKD 77


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 428 VLILSLSQLCLCKVHSATQNILVT 357
           V +LSL  LC C V  A +++++T
Sbjct: 265 VCLLSLIILCDCVVKEAQKSLVLT 288


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -1

Query: 441 HLQRRPYTFIVTI 403
           HLQ +P+T+ +T+
Sbjct: 476 HLQHQPFTYKITV 488


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 639 TFLAIFKYVTLSYV 680
           TFLAI+ Y+T  YV
Sbjct: 7   TFLAIWLYLTAIYV 20


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,041
Number of Sequences: 336
Number of extensions: 3358
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)