Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10436
         (720 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    27   0.58 
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    27   0.58 
AY659931-1|AAT51799.1|  167|Anopheles gambiae lysozyme i-1 protein.    27   0.58 
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   5.4  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   7.2  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   7.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   9.5  

>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 27.1 bits (57), Expect = 0.58
 Identities = 14/54 (25%), Positives = 24/54 (44%)
 Frame = +2

Query: 29  LKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLKFGGLRDNHQTS 190
           L+ C +L+  +  D     Q+  T    +   YDY   W   ++GG++  H  S
Sbjct: 53  LRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVQMLHVPS 106


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 27.1 bits (57), Expect = 0.58
 Identities = 14/54 (25%), Positives = 24/54 (44%)
 Frame = +2

Query: 29  LKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLKFGGLRDNHQTS 190
           L+ C +L+  +  D     Q+  T    +   YDY   W   ++GG++  H  S
Sbjct: 53  LRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVQMLHVPS 106


>AY659931-1|AAT51799.1|  167|Anopheles gambiae lysozyme i-1 protein.
          Length = 167

 Score = 27.1 bits (57), Expect = 0.58
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 63  DPTTPICVSCFAPSSTGKD 119
           DP T +C+SC   +S+G D
Sbjct: 35  DPVTDVCLSCICEASSGCD 53


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 427 SLYFHCHNYVCVRYILRHRTYWSQI 353
           S+YF  H+  C     R+R Y S+I
Sbjct: 435 SIYFDTHSLYCSYNRFRYRRYLSKI 459


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 128 DYVFDWNMLKFGGLRD 175
           DY   WN  ++GG+RD
Sbjct: 82  DYNLRWNDSEYGGVRD 97


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 128 DYVFDWNMLKFGGLRD 175
           DY   WN  ++GG+RD
Sbjct: 82  DYNLRWNDSEYGGVRD 97


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -2

Query: 359 TNTNVLLERCYQREVSGISPHRHSEIAATALLG 261
           +N   LL    QR+++ +  HR+  +A   L G
Sbjct: 248 SNLTQLLRMLIQRQIAFLKQHRYEPLAVYGLDG 280


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 733,950
Number of Sequences: 2352
Number of extensions: 13779
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)