Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10436
(720 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g08800.1 68417.m01449 protein kinase, putative similar to dua... 84 1e-16
At1g72710.1 68414.m08408 casein kinase, putative similar to case... 81 1e-15
At1g03930.1 68414.m00378 protein kinase (ADK1) identical to dual... 81 1e-15
At2g19470.1 68415.m02276 casein kinase, putative similar to case... 80 1e-15
At4g28880.1 68417.m04127 casein kinase, putative similar to simi... 80 2e-15
At4g26100.3 68417.m03758 casein kinase, putative similar to case... 80 2e-15
At4g26100.1 68417.m03757 casein kinase, putative similar to case... 80 2e-15
At3g23340.1 68416.m02944 casein kinase, putative similar to case... 80 2e-15
At5g44100.1 68418.m05396 casein kinase, putative similar to dual... 79 2e-15
At5g57015.1 68418.m07116 casein kinase, putative similar to case... 78 5e-15
At4g28540.1 68417.m04083 casein kinase, putative similar to case... 78 7e-15
At4g14340.1 68417.m02208 casein kinase I (CKI1) identical to cas... 77 1e-14
At4g28860.1 68417.m04124 casein kinase, putative similar to case... 77 2e-14
At1g04440.1 68414.m00435 casein kinase, putative similar to case... 75 4e-14
At5g43320.1 68418.m05294 casein kinase, putative similar to case... 75 6e-14
At3g03940.1 68416.m00412 protein kinase family protein contains ... 35 0.047
At5g18190.1 68418.m02135 protein kinase family protein contains ... 34 0.082
At2g25760.2 68415.m03092 protein kinase family protein contains ... 30 1.8
At2g25760.1 68415.m03091 protein kinase family protein contains ... 30 1.8
At2g33800.1 68415.m04147 ribosomal protein S5 family protein con... 29 2.3
At3g47110.1 68416.m05115 leucine-rich repeat transmembrane prote... 29 4.1
At4g19610.1 68417.m02881 RNA recognition motif (RRM)-containing ... 28 5.4
At1g07520.1 68414.m00805 scarecrow transcription factor family p... 28 5.4
At3g14590.1 68416.m01847 C2 domain-containing protein low simila... 28 7.2
At5g04380.1 68418.m00430 S-adenosyl-L-methionine:carboxyl methyl... 27 9.5
>At4g08800.1 68417.m01449 protein kinase, putative similar to dual
specificity kinase 1 gi|1216484|gb|AAB47968; contains
protein kinase domain, Pfam:PF00069
Length = 285
Score = 83.8 bits (198), Expect = 1e-16
Identities = 32/51 (62%), Positives = 43/51 (84%)
Frame = +2
Query: 5 HPIEFQLYLKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLK 157
HPIEF Y+ YCR LRF+++PDYA+L++LFR LF R+GF +D+VFDW +LK
Sbjct: 212 HPIEFATYIHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDFVFDWTVLK 262
>At1g72710.1 68414.m08408 casein kinase, putative similar to casein
kinase I, delta isoform [Arabidopsis thaliana]
SWISS-PROT:P42158
Length = 465
Score = 80.6 bits (190), Expect = 1e-15
Identities = 31/52 (59%), Positives = 42/52 (80%)
Frame = +2
Query: 5 HPIEFQLYLKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLKF 160
+P EF Y YCR LRF+++PDYA+L++LFR LF R+GF +DYVFDW +LK+
Sbjct: 243 YPSEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKY 294
>At1g03930.1 68414.m00378 protein kinase (ADK1) identical to dual
specificity kinase 1 (ADK1) [Arabidopsis thaliana]
gi|1216484|gb|AAB47968; supported by cDNA gi:18700076
and gi:1216483. Note: differences between cDNAs in the
11th exon, possibly due to errors or alternative
splicing.
Length = 471
Score = 80.6 bits (190), Expect = 1e-15
Identities = 30/53 (56%), Positives = 43/53 (81%)
Frame = +2
Query: 2 NHPIEFQLYLKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLKF 160
N P EF Y +YCR LRF+++PDY++L++LFR LF R+G+ +DYVFDW +LK+
Sbjct: 243 NQPSEFVSYFRYCRSLRFDDKPDYSYLKRLFRDLFIREGYQFDYVFDWTVLKY 295
>At2g19470.1 68415.m02276 casein kinase, putative similar to casein
kinase I, delta isoform [Arabidopsis thaliana]
SWISS-PROT:P42158; contains protein kinase domain,
Pfam:PF00069
Length = 433
Score = 80.2 bits (189), Expect = 1e-15
Identities = 30/52 (57%), Positives = 41/52 (78%)
Frame = +2
Query: 5 HPIEFQLYLKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLKF 160
HP EF Y YCR LRF+++PDYA+L++LFR LF R+GF +D+VFDW + K+
Sbjct: 244 HPTEFASYFHYCRSLRFDDKPDYAYLKRLFRNLFIREGFQFDFVFDWTVYKY 295
>At4g28880.1 68417.m04127 casein kinase, putative similar to similar
to casein kinase I, delta isoform [Arabidopsis thaliana]
SWISS-PROT:P42158; contains protein kinase domain,
Pfam:PF00069
Length = 415
Score = 79.8 bits (188), Expect = 2e-15
Identities = 28/53 (52%), Positives = 40/53 (75%)
Frame = +2
Query: 2 NHPIEFQLYLKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLKF 160
NHP+EF Y YC L F++RPDY L++LFR LF R+G+ +DY+FDW ++K+
Sbjct: 243 NHPVEFASYFHYCHTLTFDQRPDYGFLKRLFRDLFSREGYEFDYIFDWTIIKY 295
>At4g26100.3 68417.m03758 casein kinase, putative similar to casein
kinase I, delta isoform [Arabidopsis thaliana]
SWISS-PROT:P42158; contains protein kinase domain,
Pfam:PF00069
Length = 450
Score = 79.8 bits (188), Expect = 2e-15
Identities = 30/52 (57%), Positives = 42/52 (80%)
Frame = +2
Query: 5 HPIEFQLYLKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLKF 160
+P EF Y YCR LRF+++PDYA+L+++FR LF R+GF +DYVFDW +LK+
Sbjct: 244 YPSEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKY 295
>At4g26100.1 68417.m03757 casein kinase, putative similar to casein
kinase I, delta isoform [Arabidopsis thaliana]
SWISS-PROT:P42158; contains protein kinase domain,
Pfam:PF00069
Length = 450
Score = 79.8 bits (188), Expect = 2e-15
Identities = 30/52 (57%), Positives = 42/52 (80%)
Frame = +2
Query: 5 HPIEFQLYLKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLKF 160
+P EF Y YCR LRF+++PDYA+L+++FR LF R+GF +DYVFDW +LK+
Sbjct: 244 YPSEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKY 295
>At3g23340.1 68416.m02944 casein kinase, putative similar to casein
kinase I [Arabidopsis thaliana] gi|1197461|emb|CAA55396
Length = 442
Score = 79.8 bits (188), Expect = 2e-15
Identities = 30/53 (56%), Positives = 43/53 (81%)
Frame = +2
Query: 2 NHPIEFQLYLKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLKF 160
++P EF Y YCR LRFE++PDY++L++LFR LF R+G+ +DYVFDW +LK+
Sbjct: 243 SYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKY 295
>At5g44100.1 68418.m05396 casein kinase, putative similar to dual
specificity kinase 1 gi|1216484|gb|AAB47968
Length = 476
Score = 79.4 bits (187), Expect = 2e-15
Identities = 30/53 (56%), Positives = 42/53 (79%)
Frame = +2
Query: 2 NHPIEFQLYLKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLKF 160
N P EF Y YCR LRF+++PDY++L++LFR LF R+G+ +DYVFDW +LK+
Sbjct: 243 NQPSEFVSYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGYQFDYVFDWTVLKY 295
>At5g57015.1 68418.m07116 casein kinase, putative similar to casein
kinase I, delta isoform [Arabidopsis thaliana]
SWISS-PROT:P42158; contains protein kinase domain,
Pfam:PF00069
Length = 435
Score = 78.2 bits (184), Expect = 5e-15
Identities = 29/52 (55%), Positives = 41/52 (78%)
Frame = +2
Query: 5 HPIEFQLYLKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLKF 160
+P EF Y YCR LRF+++PDY +L+++FR LF R+GF +DYVFDW +LK+
Sbjct: 244 YPSEFASYFHYCRSLRFDDKPDYGYLKRIFRDLFIREGFQFDYVFDWTILKY 295
>At4g28540.1 68417.m04083 casein kinase, putative similar to casein
kinase I [Arabidopsis thaliana] gi|1103318|emb|CAA55395;
contains protein kinase domain, Pfam:PF00069
Length = 479
Score = 77.8 bits (183), Expect = 7e-15
Identities = 30/52 (57%), Positives = 42/52 (80%)
Frame = +2
Query: 2 NHPIEFQLYLKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLK 157
++P EF Y +YCR LRFE++PDY++L++LFR LF R+G+ +DYVFDW LK
Sbjct: 247 SYPPEFVSYFQYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTALK 298
>At4g14340.1 68417.m02208 casein kinase I (CKI1) identical to casein
kinase I [Arabidopsis thaliana] gi|1103318|emb|CAA55395
Length = 457
Score = 77.0 bits (181), Expect = 1e-14
Identities = 30/53 (56%), Positives = 41/53 (77%)
Frame = +2
Query: 2 NHPIEFQLYLKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLKF 160
++P EF Y YCR LRFE++PDY++LR+LFR LF R+G+ DYVFDW + K+
Sbjct: 249 SYPSEFTSYFHYCRSLRFEDKPDYSYLRRLFRDLFIREGYQLDYVFDWTISKY 301
>At4g28860.1 68417.m04124 casein kinase, putative similar to casein
kinase I, delta isoform [Arabidopsis thaliana]
SWISS-PROT:P42158; contains protein kinase domain,
Pfam:PF00069
Length = 414
Score = 76.6 bits (180), Expect = 2e-14
Identities = 26/53 (49%), Positives = 40/53 (75%)
Frame = +2
Query: 2 NHPIEFQLYLKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLKF 160
+HP+EF Y YC L F++RPDY L++LFR LF R+G+ +DY++DW ++K+
Sbjct: 243 SHPVEFASYFHYCHTLTFDQRPDYGFLKRLFRDLFSREGYEFDYIYDWTIIKY 295
>At1g04440.1 68414.m00435 casein kinase, putative similar to casein
kinase I [Arabidopsis thaliana] gi|1103318|emb|CAA55395;
contains protein kinase domain, Pfam:PF00069
Length = 468
Score = 75.4 bits (177), Expect = 4e-14
Identities = 36/99 (36%), Positives = 54/99 (54%)
Frame = +2
Query: 2 NHPIEFQLYLKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLKFGGLRDNH 181
N P EF Y Y R LRFE++PDY++L++LFR LF R+G+ +DYVFDW +L++ +
Sbjct: 243 NFPPEFTSYFLYVRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILRYPQFGSSS 302
Query: 182 QTSGIDRALRRLEQNQEQENTAATAASPVMQWQQFRNGG 298
++ R R N + P+ Q + R G
Sbjct: 303 SSNSKPRPTLRPAMNIPVPSADKAEKPPIGQDSRERFSG 341
>At5g43320.1 68418.m05294 casein kinase, putative similar to casein
kinase I (CKI2) [Arabidopsis thaliana]
gi|1103322|emb|CAA55397; contains protein kinase domain,
Pfam:PF00069
Length = 480
Score = 74.5 bits (175), Expect = 6e-14
Identities = 33/73 (45%), Positives = 45/73 (61%)
Frame = +2
Query: 8 PIEFQLYLKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLKFGGLRDNHQT 187
P EF Y Y R LRFE++PDY +L++LFR LF R+G+ +DYVFDW +LK+ +
Sbjct: 245 PPEFTSYFLYVRSLRFEDKPDYPYLKRLFRDLFIREGYQFDYVFDWTILKYPQFSSGSSS 304
Query: 188 SGIDRALRRLEQN 226
S R+ R N
Sbjct: 305 SSKPRSSLRPAMN 317
>At3g03940.1 68416.m00412 protein kinase family protein contains
Pfam domains, PF00069: Protein kinase domain
Length = 701
Score = 35.1 bits (77), Expect = 0.047
Identities = 28/90 (31%), Positives = 39/90 (43%)
Frame = +2
Query: 8 PIEFQLYLKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLKFGGLRDNHQT 187
P F+L+L+ ++F+E P+YA L +F TL + D LK G R
Sbjct: 386 PPPFKLFLEAVTNMKFDEEPNYAKLISIFDTLIEPCAISRPIRID-GALKVGQKR----- 439
Query: 188 SGIDRALRRLEQNQEQENTAATAASPVMQW 277
R L LE++ EQ SP QW
Sbjct: 440 ---GRLLINLEED-EQPRKKIRIGSPATQW 465
>At5g18190.1 68418.m02135 protein kinase family protein contains
Pfam domains, PF00069: Protein kinase domain
Length = 691
Score = 34.3 bits (75), Expect = 0.082
Identities = 26/90 (28%), Positives = 40/90 (44%)
Frame = +2
Query: 8 PIEFQLYLKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLKFGGLRDNHQT 187
P F+L+L+ ++F+E P+YA L +F +L + + D LK G R
Sbjct: 376 PPPFKLFLEAVTNMKFDEEPNYAKLISIFDSLIEQCALSRPIKID-GALKVGQKR----- 429
Query: 188 SGIDRALRRLEQNQEQENTAATAASPVMQW 277
R L L+++ EQ SP QW
Sbjct: 430 ---GRMLLNLDED-EQPKKKIRIGSPACQW 455
>At2g25760.2 68415.m03092 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 676
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 8 PIEFQLYLKYCRRLRFEERPDYAHLRQLF 94
P F+ +++Y L+F+E PDYA LF
Sbjct: 358 PQPFRQFVEYVVNLKFDEEPDYAKYVSLF 386
>At2g25760.1 68415.m03091 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 673
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 8 PIEFQLYLKYCRRLRFEERPDYAHLRQLF 94
P F+ +++Y L+F+E PDYA LF
Sbjct: 355 PQPFRQFVEYVVNLKFDEEPDYAKYVSLF 383
>At2g33800.1 68415.m04147 ribosomal protein S5 family protein
contains Pfam profiles PF03719: Ribosomal protein S5,
C-terminal domain, PF00333: Ribosomal protein S5,
N-terminal domain
Length = 303
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 161 GGLRDNHQTSGIDRAL-RRLEQNQEQENTAATAASPVMQWQQFRNGGEER 307
G +R + +G++ AL ++L N N AT A+ V Q +QFR+ +ER
Sbjct: 246 GAVRIVLEMAGVENALGKQLGSNNALNNARATLAA-VQQMRQFRDVAQER 294
>At3g47110.1 68416.m05115 leucine-rich repeat transmembrane protein
kinase, putative protein kinase Xa21 receptor type
precursor, Oryza sativa, PIR:A57676
Length = 1025
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -2
Query: 500 QNRECVVEV-HAHASSPAVLIICRGVLILSLSQLCLCKVH 384
Q + C VE+ H+S ++ IC ++ +L LCLC V+
Sbjct: 636 QLQPCSVELPRRHSSVRKIITICVSAVMAALLLLCLCVVY 675
>At4g19610.1 68417.m02881 RNA recognition motif (RRM)-containing
protein contains InterPro entry IPR000504: RNA-binding
region RNP-1 (RNA recognition motif) (RRM)
Length = 783
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -3
Query: 211 SKSAINTTCLMVITQSSKL*HVPIKHVVICKSLPVEEGAKQLTQM-GVVGSLLKTKSP 41
+K+ +N T L + KH+++ K+LP K+L QM G GSL K P
Sbjct: 430 AKAGVNVTSLEKFATRNGDEKNRSKHILLVKNLPFASTEKELAQMFGKFGSLDKIILP 487
>At1g07520.1 68414.m00805 scarecrow transcription factor family
protein similar to GB:AAD24412 from [Arabidopsis
thaliana] (Plant J. 18 (1), 111-119 (1999)); contains
Pfam profile: PF03514 GRAS family transcription factor
Length = 695
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 44 RLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFD 142
R F+++P A L QLFR + G+ D+V D
Sbjct: 639 RAGFKQKPVEAELVQLFREKMKKWGYHKDFVLD 671
>At3g14590.1 68416.m01847 C2 domain-containing protein low
similarity to SP|Q16974 Calcium-dependent protein kinase
C (EC 2.7.1.-) {Aplysia californica}; contains Pfam
profile PF00168: C2 domain
Length = 737
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -3
Query: 184 LMVITQSSKL*HVPIKHVVICKSLPVEEGAKQLTQMGVVGSLLKTKSPAV 35
+ V+ +KL P + V ICK A +T G S++ KSP V
Sbjct: 396 ITVLEDEAKLNDDPFEGVTICKEDMWASFASDVTNKGSFSSVVSDKSPRV 445
>At5g04380.1 68418.m00430 S-adenosyl-L-methionine:carboxyl
methyltransferase family protein similar to
SAM:salicylic acid carboxyl methyltransferase (SAMT)
[GI:6002712][Clarkia breweri] and to SAM:benzoic acid
carboxyl methyltransferase
(BAMT)[GI:9789277][Antirrhinum majus]
Length = 385
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 339 REMLSA*SQRYLSSPPFRNCCHCIT 265
R +L+ + L +P +R+CCHC T
Sbjct: 231 RMVLTLIGRNTLDNPLYRDCCHCWT 255
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,632,249
Number of Sequences: 28952
Number of extensions: 284089
Number of successful extensions: 722
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1565336320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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