Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10434X
(308 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0466 + 25433678-25434007,25434118-25434176,25434345-254344... 30 0.32
07_03_1577 - 27869596-27869682,27869769-27869869,27869956-278699... 30 0.43
09_02_0479 - 9753161-9753171,9755260-9755547,9755883-9756222 29 0.74
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 29 0.74
03_05_0070 - 20478396-20478505,20478605-20478780,20481162-204812... 28 1.7
02_03_0171 + 15945591-15945681,15947068-15947138,15947715-159478... 28 1.7
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 27 2.3
06_03_0930 - 26038341-26038508,26039114-26039254,26040799-260408... 27 3.0
05_04_0285 - 19825106-19826988,19828479-19828529,19830013-19830361 27 3.0
04_03_0937 + 20923705-20923833,20924001-20924012,20924413-209244... 27 3.0
03_01_0012 - 101584-101898,102274-102531,102932-103474 27 4.0
02_05_0395 - 28596957-28597400,28598506-28598586,28600049-28600270 27 4.0
12_02_0910 + 24225180-24225415,24225523-24225678,24226387-242264... 26 5.2
12_01_1017 - 10348198-10348326,10348412-10348532,10348746-103492... 26 5.2
10_06_0114 - 10911713-10911724,10913642-10913772,10913869-109142... 26 5.2
08_02_1547 + 27795664-27795674,27795743-27795892,27796182-277979... 26 5.2
11_06_0118 + 20308921-20309204,20310559-20310700 26 6.9
09_04_0408 + 17352110-17352619,17352709-17352834,17353036-173532... 26 6.9
02_05_0744 - 31428834-31428991,31429079-31429155,31429252-314293... 26 6.9
07_03_0082 - 13222635-13223350,13223368-13223928,13224095-132248... 25 9.2
06_03_0937 - 26113346-26113645,26113721-26114193,26114436-26114724 25 9.2
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 25 9.2
04_04_0372 + 24781572-24781612,24781696-24782413 25 9.2
04_04_0261 + 24007790-24009098,24009191-24011118 25 9.2
01_04_0146 - 16711102-16711288,16712038-16712760,16712848-16712888 25 9.2
>04_04_0466 +
25433678-25434007,25434118-25434176,25434345-25434426,
25435024-25435122,25435750-25435831,25436759-25436823,
25437241-25438308,25438369-25438446,25438550-25438596,
25438734-25438779,25438871-25438950,25439050-25439166,
25439842-25439923,25440156-25440281,25440415-25440489,
25440743-25440868,25441542-25441646
Length = 888
Score = 30.3 bits (65), Expect = 0.32
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +2
Query: 137 ASTPAVSVTSTPMKRLCFRLLKTSQLGGPRVLNRRYREVYSSQLK 271
A+ A+ ++S+ M + + G PRV NRR+ EVY++++K
Sbjct: 704 ATLLALELSSSLMAKSGVIFVTMYNFGSPRVGNRRFAEVYNAKVK 748
>07_03_1577 -
27869596-27869682,27869769-27869869,27869956-27869995,
27870879-27870953
Length = 100
Score = 29.9 bits (64), Expect = 0.43
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +1
Query: 115 DLKSQLEGFNTSCLRDVDTNEKIVL 189
DL+S+L+ NT CL + + N+K+++
Sbjct: 54 DLQSKLDAVNTECLAEKEKNKKLII 78
>09_02_0479 - 9753161-9753171,9755260-9755547,9755883-9756222
Length = 212
Score = 29.1 bits (62), Expect = 0.74
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +2
Query: 122 RVSSKASTPAVSVTSTPMKRLCFR 193
+VSS++S+P SVT+ ++ +CFR
Sbjct: 72 QVSSQSSSPVESVTTATLRPICFR 95
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 29.1 bits (62), Expect = 0.74
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 77 TLPP*KTSPRSPQT*RVSSKASTPAVSVTST 169
TLPP + SP SP T SSK TP+ S S+
Sbjct: 31 TLPPGRLSPVSPLTHSSSSKLPTPSSSSGSS 61
>03_05_0070 -
20478396-20478505,20478605-20478780,20481162-20481265,
20481346-20481504,20481718-20481857,20482222-20482311,
20482902-20482970,20484295-20484516,20486175-20486293,
20486377-20486492,20488058-20488146,20488790-20488883
Length = 495
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 91 KDLPKVATDLKSQLEGFNTSCLRDVDTNEKI 183
K+L + DLKS+LEG+NT D++ + +
Sbjct: 266 KELDERRHDLKSELEGYNTGDSDDINKKKAL 296
>02_03_0171 +
15945591-15945681,15947068-15947138,15947715-15947817,
15948189-15948328,15948535-15948693,15948775-15948878,
15950373-15950548,15952643-15952832,15953704-15953803,
15954171-15954339,15954908-15954990,15955073-15955149,
15955386-15955557
Length = 544
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 91 KDLPKVATDLKSQLEGFNTSCLRDVDTNEKI 183
K+L + DLKS+LEG+NT D++ + +
Sbjct: 88 KELDERMHDLKSELEGYNTGDSDDINKKKAL 118
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 27.5 bits (58), Expect = 2.3
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 26 PLPHQKYIDSEWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTPMKR 181
P P I +++PAP PP ++S R+P SSK P P R
Sbjct: 651 PPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANR 702
>06_03_0930 -
26038341-26038508,26039114-26039254,26040799-26040858,
26040972-26041034,26041444-26041454,26041722-26041802,
26042783-26043020,26043563-26043997
Length = 398
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 101 PRSPQT*RVSSKASTPAVSVTSTPMKRLCF-RLLKTSQLGGPRVLNR 238
P P ++ A+TP + T +P KR+C RL T + G +++
Sbjct: 120 PPPPPPVVTAAAATTPTAAPTPSPAKRVCLVRLTPTLRRGAAAAIHK 166
>05_04_0285 - 19825106-19826988,19828479-19828529,19830013-19830361
Length = 760
Score = 27.1 bits (57), Expect = 3.0
Identities = 24/81 (29%), Positives = 33/81 (40%)
Frame = +2
Query: 26 PLPHQKYIDSEWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKT 205
P H + + S P V +PP PR P R S P + STP LLK
Sbjct: 41 PRHHYRPLPSSVPVAPV-MPPLPCHPRIPHLPRAREPPSLPPSTPISTPNT----NLLKL 95
Query: 206 SQLGGPRVLNRRYREVYSSQL 268
+Q G R +++ SQ+
Sbjct: 96 AQAGEGSRGARTVKQIRRSQI 116
>04_03_0937 +
20923705-20923833,20924001-20924012,20924413-20924473,
20924523-20924749,20924859-20925104,20925645-20925657,
20927681-20928302,20928320-20928949,20928960-20929224
Length = 734
Score = 27.1 bits (57), Expect = 3.0
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -3
Query: 237 RLRTLGPPSCDVFSRRKHNLFIGVDVTETAGVEAFELTL-QVCGDLGE 97
R R L SCD SRR+ +L++ +D + G +L L V GD GE
Sbjct: 259 RSRCLRSCSCDEHSRRRRHLYLVLDDWK-EGYSLHKLDLSHVSGDGGE 305
>03_01_0012 - 101584-101898,102274-102531,102932-103474
Length = 371
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 128 SSKASTPAVSVTSTPMKRLCFRLLKTSQLGGPRVLNRRYREVYSSQLKHTETQXKN 295
S AS +V + + + ++ +LGGP VL R+ +V + K E + KN
Sbjct: 27 SPSASLTTTTVRCSKGEMAVVKCIRVHELGGPEVL--RWEQVEVGEPKEGEIRIKN 80
>02_05_0395 - 28596957-28597400,28598506-28598586,28600049-28600270
Length = 248
Score = 26.6 bits (56), Expect = 4.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 259 RINFSIPSIKDSWSSQLRRLQQTEAQS 179
R+N S+P+ + SW + RR +Q + S
Sbjct: 151 RMNLSVPAEEGSWEKRKRRRKQRKVSS 177
>12_02_0910 +
24225180-24225415,24225523-24225678,24226387-24226450,
24226738-24226947,24227678-24227866,24228044-24228342,
24228575-24228851,24229045-24229317,24230316-24230549,
24230707-24230856
Length = 695
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 280 LGVLKLARINFSIPSIKDSWSSQLRRLQQTEAQSFH 173
L V+ A+ +F I + SW+S L QT A FH
Sbjct: 470 LAVVVPAQASFFITYVVTSWTSIASELTQTAALLFH 505
>12_01_1017 -
10348198-10348326,10348412-10348532,10348746-10349275,
10349318-10349433,10349672-10349990,10350019-10350106,
10350194-10350639
Length = 582
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -3
Query: 267 SWLE*TSRYRRLRTLGPPSCDVFSRRKHNLFIGVDVTETAGVEAFE 130
+WL+ RYRRLR++G S K + +++ E +E E
Sbjct: 381 TWLDQMERYRRLRSMGTEVFFKCSVSKETTLMVMEMLEKLDLETDE 426
>10_06_0114 -
10911713-10911724,10913642-10913772,10913869-10914229,
10914339-10915081,10918916-10918964,10919063-10919334,
10919426-10919519,10919618-10920000,10920504-10920575,
10920656-10920778,10920875-10921048,10921115-10921579,
10921662-10921839
Length = 1018
Score = 26.2 bits (55), Expect = 5.2
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -2
Query: 214 QLRRLQQTEAQSFHWCRRHGDSWC*SLR 131
Q + Q S+H RR D WC +R
Sbjct: 665 QFNQATQQGKDSYHLYRRRNDGWCVKIR 692
>08_02_1547 +
27795664-27795674,27795743-27795892,27796182-27797906,
27799447-27799546,27799657-27800268,27800399-27800521,
27800905-27801039,27801108-27801209,27801716-27801778,
27801854-27802045,27802121-27802258,27802632-27802694,
27803068-27803466
Length = 1270
Score = 26.2 bits (55), Expect = 5.2
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = -3
Query: 267 SWLE*TSRYRRLRTLGPP---SCDV---FSRRKHNLFIGVDVTETAGVEAFELTLQVCG 109
+W + RYRR+R +G C + ++ + +F +D+ ET +E E + +CG
Sbjct: 510 TWSDQMERYRRMRAIGSEVLLKCSMSEEYTLKVMEMFEKLDL-ETNAIEGDEFDVTLCG 567
>11_06_0118 + 20308921-20309204,20310559-20310700
Length = 141
Score = 25.8 bits (54), Expect = 6.9
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 65 AP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVT 163
AP LPP +PRSP RV+ AST A +V+
Sbjct: 46 APPAPLPPRGQAPRSPLL-RVAIPASTAAEAVS 77
>09_04_0408 +
17352110-17352619,17352709-17352834,17353036-17353209,
17353669-17353830,17353998-17354140,17354835-17354910,
17355445-17355589,17355847-17355896,17356001-17356078,
17357153-17357314,17357406-17357669,17357929-17358033,
17358158-17358247,17358344-17358346
Length = 695
Score = 25.8 bits (54), Expect = 6.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 220 TKSP*STVSRSLFEPA*AHRD 282
T+ P S VS+SL EP +H+D
Sbjct: 265 TEGPGSIVSKSLLEPIRSHKD 285
>02_05_0744 -
31428834-31428991,31429079-31429155,31429252-31429302,
31429379-31429452,31429522-31429647,31431317-31431461,
31431552-31432114
Length = 397
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -3
Query: 159 TETAGVEAFELTLQVCGDLGEVFQGGSVTHGAG 61
T++AG++ E +CG + ++GG G G
Sbjct: 205 TDSAGIDGVENMKLICGTVRAEWKGGEEREGKG 237
>07_03_0082 -
13222635-13223350,13223368-13223928,13224095-13224839,
13226548-13226638,13227330-13227342,13227633-13227689,
13229170-13229260,13229444-13229476,13229588-13230085
Length = 934
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +1
Query: 94 DLPKVA-TDLKSQLEGFNTSCLRDVDTNE 177
DLP V T + QL G C+R+VD E
Sbjct: 584 DLPLVLMTKARGQLYGSRFGCVREVDVEE 612
>06_03_0937 - 26113346-26113645,26113721-26114193,26114436-26114724
Length = 353
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 109 ATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVAT 213
A+ + LE +SCL D + NE+ ED AT
Sbjct: 160 ASKPRCNLESAASSCLTDTNENERASARMMEDQAT 194
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 25.4 bits (53), Expect = 9.2
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +2
Query: 26 PLPHQKYIDSEWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTP 172
PLP + P P PP + SP P+ ++++ P + T+TP
Sbjct: 65 PLPSATPPLAASPPPPPPPPPPRNSPSPPKPPSQAAQSPLPPTTTTTTP 113
>04_04_0372 + 24781572-24781612,24781696-24782413
Length = 252
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 83 GVSLTEQAILNQYIFDEEGDRR 18
G SLT+ ++ +++ DEE RR
Sbjct: 167 GKSLTDDILMRRFVVDEEATRR 188
>04_04_0261 + 24007790-24009098,24009191-24011118
Length = 1078
Score = 25.4 bits (53), Expect = 9.2
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -2
Query: 304 RNRVLXLSLGVLKLARINFSIPSIKDSWSSQLRRLQQT 191
RNR SL ++ LA NFS S++ W L+ + T
Sbjct: 838 RNRTQFSSLQIIDLASNNFS-GSLQPQWFDSLKAMMVT 874
>01_04_0146 - 16711102-16711288,16712038-16712760,16712848-16712888
Length = 316
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 83 GVSLTEQAILNQYIFDEEGDRR 18
G SLT+ ++ +++ DEE RR
Sbjct: 179 GKSLTDDILMRRFVVDEEATRR 200
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,202,867
Number of Sequences: 37544
Number of extensions: 190827
Number of successful extensions: 573
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 375959444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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