Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10430
         (707 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D42085-1|BAA07680.2|  832|Homo sapiens KIAA0095 protein.               84   4e-16
BC034346-1|AAH34346.1|  819|Homo sapiens nucleoporin 93kDa protein.    84   4e-16
BC030652-1|AAH30652.1|  929|Homo sapiens testis expressed 10 pro...    30   7.1  
AY598337-1|AAT06748.1|  929|Homo sapiens L18 protein.                  30   7.1  
AL445214-2|CAI39743.1|  929|Homo sapiens testis expressed 10 pro...    30   7.1  
AL353805-2|CAI12538.1|  929|Homo sapiens testis expressed 10 pro...    30   7.1  
AK000294-1|BAA91062.1|  929|Homo sapiens protein ( Homo sapiens ...    30   7.1  
AB060968-1|BAB87845.1|  929|Homo sapiens nbla10363 protein.            30   7.1  

>D42085-1|BAA07680.2|  832|Homo sapiens KIAA0095 protein.
          Length = 832

 Score = 84.2 bits (199), Expect = 4e-16
 Identities = 37/83 (44%), Positives = 59/83 (71%)
 Frame = +3

Query: 255 YVRKFELTDPSDALHYYYFLRNLKDPSGKNLFMCCCTDLALESRDYELLFGRIDANSSLR 434
           Y RKFE TDP +AL Y+YFLR+ KD  G+N+F+ C ++L +ESR+++++ G+++ N   R
Sbjct: 548 YTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLE-NDGSR 606

Query: 435 SPGLVDQFNNPHIDSKVIALNVA 503
            PG++D+F +   D+K I   VA
Sbjct: 607 KPGVIDKFTS---DTKPIINKVA 626



 Score = 60.9 bits (141), Expect = 4e-09
 Identities = 30/70 (42%), Positives = 43/70 (61%)
 Frame = +1

Query: 1   ETHYHAYEKPVVYFQVLALTGQFEPAIEFLSRIPRYQVHGVHMALALHDVYMLGTPRNVQ 180
           E+H+   ++P +YFQVL LT QFE A+ FL R+ R + H VH+AL L ++ +L       
Sbjct: 463 ESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQS 522

Query: 181 APLLSVDTED 210
           A LLS +  D
Sbjct: 523 AQLLSHEPGD 532



 Score = 40.7 bits (91), Expect = 0.005
 Identities = 19/33 (57%), Positives = 25/33 (75%)
 Frame = +2

Query: 515 NKGLFEDAITMYDIADNLEKVVELSCILLAQVV 613
           NKGLFE+A  +YD+A N +KV+EL   LL+ VV
Sbjct: 631 NKGLFEEAAKLYDLAKNADKVLELMNKLLSPVV 663


>BC034346-1|AAH34346.1|  819|Homo sapiens nucleoporin 93kDa protein.
          Length = 819

 Score = 84.2 bits (199), Expect = 4e-16
 Identities = 37/83 (44%), Positives = 59/83 (71%)
 Frame = +3

Query: 255 YVRKFELTDPSDALHYYYFLRNLKDPSGKNLFMCCCTDLALESRDYELLFGRIDANSSLR 434
           Y RKFE TDP +AL Y+YFLR+ KD  G+N+F+ C ++L +ESR+++++ G+++ N   R
Sbjct: 535 YTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLE-NDGSR 593

Query: 435 SPGLVDQFNNPHIDSKVIALNVA 503
            PG++D+F +   D+K I   VA
Sbjct: 594 KPGVIDKFTS---DTKPIINKVA 613



 Score = 61.3 bits (142), Expect = 3e-09
 Identities = 30/70 (42%), Positives = 44/70 (62%)
 Frame = +1

Query: 1   ETHYHAYEKPVVYFQVLALTGQFEPAIEFLSRIPRYQVHGVHMALALHDVYMLGTPRNVQ 180
           E+H+   ++P +YFQVL LT QFE A+ FL R+ R + H VH+AL L ++ +L      +
Sbjct: 450 ESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQR 509

Query: 181 APLLSVDTED 210
           A LLS +  D
Sbjct: 510 AQLLSHEPGD 519



 Score = 40.7 bits (91), Expect = 0.005
 Identities = 19/33 (57%), Positives = 25/33 (75%)
 Frame = +2

Query: 515 NKGLFEDAITMYDIADNLEKVVELSCILLAQVV 613
           NKGLFE+A  +YD+A N +KV+EL   LL+ VV
Sbjct: 618 NKGLFEEAAKLYDLAKNADKVLELMNKLLSPVV 650


>BC030652-1|AAH30652.1|  929|Homo sapiens testis expressed 10
           protein.
          Length = 929

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +3

Query: 414 DANSSLR-SPGLVDQFNNPHIDSKVIALNVAEHS*TRAYLKM 536
           D +S LR S GL +Q  NPH  S  I +N  EH+  + ++++
Sbjct: 240 DGSSRLRESEGLQEQKENPHATSNSIFINWKEHANDQQHIQV 281


>AY598337-1|AAT06748.1|  929|Homo sapiens L18 protein.
          Length = 929

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +3

Query: 414 DANSSLR-SPGLVDQFNNPHIDSKVIALNVAEHS*TRAYLKM 536
           D +S LR S GL +Q  NPH  S  I +N  EH+  + ++++
Sbjct: 240 DGSSRLRESEGLQEQKENPHATSNSIFINWKEHANDQQHIQV 281


>AL445214-2|CAI39743.1|  929|Homo sapiens testis expressed 10
           protein.
          Length = 929

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +3

Query: 414 DANSSLR-SPGLVDQFNNPHIDSKVIALNVAEHS*TRAYLKM 536
           D +S LR S GL +Q  NPH  S  I +N  EH+  + ++++
Sbjct: 240 DGSSRLRESEGLQEQKENPHATSNSIFINWKEHANDQQHIQV 281


>AL353805-2|CAI12538.1|  929|Homo sapiens testis expressed 10
           protein.
          Length = 929

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +3

Query: 414 DANSSLR-SPGLVDQFNNPHIDSKVIALNVAEHS*TRAYLKM 536
           D +S LR S GL +Q  NPH  S  I +N  EH+  + ++++
Sbjct: 240 DGSSRLRESEGLQEQKENPHATSNSIFINWKEHANDQQHIQV 281


>AK000294-1|BAA91062.1|  929|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20287 fis, clone HEP04390. ).
          Length = 929

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +3

Query: 414 DANSSLR-SPGLVDQFNNPHIDSKVIALNVAEHS*TRAYLKM 536
           D +S LR S GL +Q  NPH  S  I +N  EH+  + ++++
Sbjct: 240 DGSSRLRESEGLQEQKENPHATSNSIFINWKEHANDQQHIQV 281


>AB060968-1|BAB87845.1|  929|Homo sapiens nbla10363 protein.
          Length = 929

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +3

Query: 414 DANSSLR-SPGLVDQFNNPHIDSKVIALNVAEHS*TRAYLKM 536
           D +S LR S GL +Q  NPH  S  I +N  EH+  + ++++
Sbjct: 240 DGSSRLRESEGLQEQKENPHATSNSIFINWKEHANDQQHIQV 281


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,740,025
Number of Sequences: 237096
Number of extensions: 1881476
Number of successful extensions: 4924
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4924
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)