Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10429
         (423 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC008303-1|AAH08303.1|  235|Homo sapiens transmembrane protein 1...    29   6.5  
AF258340-1|AAF68667.1|  235|Homo sapiens hepatocellular carcinom...    29   6.5  
AC006479-1|AAP21884.1|  235|Homo sapiens unknown protein.              29   6.5  

>BC008303-1|AAH08303.1|  235|Homo sapiens transmembrane protein 176A
           protein.
          Length = 235

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -2

Query: 140 GDADSD*RAAERPEHTHYSSH 78
           G ADSD  A E P+HTH   H
Sbjct: 2   GTADSDEMAPEAPQHTHIDVH 22


>AF258340-1|AAF68667.1|  235|Homo sapiens hepatocellular
           carcinoma-associated antigen 112 protein.
          Length = 235

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -2

Query: 140 GDADSD*RAAERPEHTHYSSH 78
           G ADSD  A E P+HTH   H
Sbjct: 2   GTADSDEMAPEAPQHTHIDVH 22


>AC006479-1|AAP21884.1|  235|Homo sapiens unknown protein.
          Length = 235

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -2

Query: 140 GDADSD*RAAERPEHTHYSSH 78
           G ADSD  A E P+HTH   H
Sbjct: 2   GTADSDEMAPEAPQHTHIDVH 22


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,984,624
Number of Sequences: 237096
Number of extensions: 1168069
Number of successful extensions: 1624
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1623
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3259265358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)