BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10426
(779 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 30 3.1
M81795-1|AAA28483.1| 1301|Drosophila melanogaster phosphotyrosin... 30 3.1
M80539-1|AAA28485.1| 1231|Drosophila melanogaster receptor-linke... 30 3.1
M80464-1|AAA28486.1| 1231|Drosophila melanogaster protein-tyrosi... 30 3.1
AE014298-3060|AAF50875.1| 223|Drosophila melanogaster CG11229-P... 29 7.2
AE014296-2224|AAF49861.2| 702|Drosophila melanogaster CG11262-P... 29 7.2
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 30.3 bits (65), Expect = 3.1
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -1
Query: 746 DGFSPFDVGVHVL**WTLVPNWNNTQPYLGLFF*FIRDFADFGLLVKK*ADLTK 585
DG P D G+ + + + N + Q +LGL F R DF L K D+ K
Sbjct: 923 DGIMPNDKGIEAIKNFPIPNNVHTVQSFLGLCSYFRRFIKDFSRLAKPLHDILK 976
>M81795-1|AAA28483.1| 1301|Drosophila melanogaster phosphotyrosine
phosphatase protein.
Length = 1301
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 101 HSP*DISSKVSSIITTAAPPFKPKRITAS 187
HSP D+S ++SS + AA P P +AS
Sbjct: 1150 HSPSDLSHQISSTVANAASPVTPATASAS 1178
>M80539-1|AAA28485.1| 1231|Drosophila melanogaster receptor-linked
protein tyrosinephosphatase protein.
Length = 1231
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 101 HSP*DISSKVSSIITTAAPPFKPKRITAS 187
HSP D+S ++SS + AA P P +AS
Sbjct: 1080 HSPSDLSHQISSTVANAASPVTPATASAS 1108
>M80464-1|AAA28486.1| 1231|Drosophila melanogaster protein-tyrosine
phosphatase protein.
Length = 1231
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 101 HSP*DISSKVSSIITTAAPPFKPKRITAS 187
HSP D+S ++SS + AA P P +AS
Sbjct: 1080 HSPSDLSHQISSTVANAASPVTPATASAS 1108
>AE014298-3060|AAF50875.1| 223|Drosophila melanogaster CG11229-PA
protein.
Length = 223
Score = 29.1 bits (62), Expect = 7.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 389 VNCNTTHYRANWVPGPPSTNVH 324
VN + T R+ W PGPP++ +H
Sbjct: 192 VNASATASRSFWFPGPPASIIH 213
>AE014296-2224|AAF49861.2| 702|Drosophila melanogaster CG11262-PA
protein.
Length = 702
Score = 29.1 bits (62), Expect = 7.2
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 471 PAGVIAKRPAPIAFPTVAHLNGEWQIVSVNILLKFALNFC*ISSFF 608
P G +PA F T+AHL +I +L+K C + FF
Sbjct: 454 PTGRQLLKPAENYFQTLAHLEAHHRIRDKTLLIKCLFTLCFVIIFF 499
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,159,966
Number of Sequences: 53049
Number of extensions: 845785
Number of successful extensions: 1741
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1741
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -