Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10426
         (779 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   7.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   7.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   7.4  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   9.7  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   9.7  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 416 SHDVVKRRPVNCNTTHYRANWVPGP 342
           S +  K++P +C+T  YR   V  P
Sbjct: 560 SDECNKKQPSDCDTLEYRNGEVTTP 584


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 303  PLPWKSIVNICRGGARYPIRPI 368
            PLP+ ++++  +   RY IR I
Sbjct: 962  PLPYAALIDELKPATRYTIRVI 983


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 303  PLPWKSIVNICRGGARYPIRPI 368
            PLP+ ++++  +   RY IR I
Sbjct: 958  PLPYAALIDELKPATRYTIRVI 979


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 315 KSIVNICRGGARYPIRP 365
           + I  I R  +RYP+RP
Sbjct: 111 QDIETIIRRNSRYPLRP 127


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 721 ESTFFNSGLLFQTGTTLNPI 662
           E  +  SG L+   TT+NPI
Sbjct: 307 EWLYILSGCLYYFSTTINPI 326


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,773
Number of Sequences: 438
Number of extensions: 5390
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)