Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10423
         (837 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0699 - 6163662-6163680,6163865-6163943,6163979-6164048,616...    29   4.6  
05_06_0126 - 25834129-25834214,25834595-25834658,25836201-258365...    29   6.1  
04_03_0091 - 11043023-11043090,11043458-11043566,11044431-110445...    29   6.1  

>08_01_0699 -
           6163662-6163680,6163865-6163943,6163979-6164048,
           6164151-6164266,6164656-6164734,6164831-6164921,
           6165006-6165084,6165161-6165248,6165371-6165454,
           6165544-6165591,6166118-6166192,6166286-6166362,
           6166460-6166548,6166711-6166749,6167133-6167206,
           6167496-6167588,6167820-6167917,6168100-6168172,
           6168322-6168406,6168513-6168634,6169307-6169414,
           6169537-6169608
          Length = 585

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +1

Query: 712 YIFDINFNRFLYLDAVGGLWNSA 780
           Y++DIN  +  Y+DA+ GLW++A
Sbjct: 132 YVYDINGKK--YIDALAGLWSTA 152


>05_06_0126 -
           25834129-25834214,25834595-25834658,25836201-25836521,
           25836912-25837040,25837118-25837177,25837251-25837548,
           25837622-25837776,25837959-25838097,25838185-25838266,
           25838337-25838455,25838537-25838664,25838810-25838983,
           25839052-25839203,25839393-25839425,25840362-25841331,
           25841412-25841537
          Length = 1011

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 481 DCACRAVDRGLHVYRP 434
           DC CR  +RGLHV  P
Sbjct: 295 DCVCRTCNRGLHVKHP 310


>04_03_0091 -
           11043023-11043090,11043458-11043566,11044431-11044577,
           11044678-11044776,11044857-11044982,11045448-11045582,
           11046391-11046468,11046553-11046678,11046828-11046968
          Length = 342

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 164 LVTSQACERDGEMHRMHALL 105
           ++ SQAC  D E+HRMH  L
Sbjct: 76  VLESQACADDNELHRMHTWL 95


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,412,181
Number of Sequences: 37544
Number of extensions: 476164
Number of successful extensions: 1522
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1521
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)