Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10422
(668 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11 pro... 170 4e-42
BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11 p... 170 4e-42
AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting ... 170 4e-42
AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11 p... 170 4e-42
AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11 p... 170 4e-42
AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen ... 170 4e-42
AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11 p... 170 4e-42
X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11 pro... 163 5e-40
AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11 p... 153 5e-37
AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11 p... 75 2e-13
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ... 30 8.6
AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens ... 30 8.6
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat... 30 8.6
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein. 30 8.6
>L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 170 bits (413), Expect = 4e-42
Identities = 77/84 (91%), Positives = 83/84 (98%)
Frame = +2
Query: 254 AFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 433
+FGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 59 SFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 118
Query: 434 YDPSIGIYGLDFYVVLGRPGFNVA 505
YDPSIGIYGLDFYVVLGRPGF++A
Sbjct: 119 YDPSIGIYGLDFYVVLGRPGFSIA 142
Score = 94.7 bits (225), Expect = 3e-19
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = +3
Query: 105 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 254
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVR
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVR 58
Score = 51.6 bits (118), Expect = 2e-06
Identities = 19/34 (55%), Positives = 28/34 (82%)
Frame = +1
Query: 493 FQRSTRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 594
F + ++R+TG +G HR++KE+AM+WFQQKYDG
Sbjct: 139 FSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDG 172
>BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 170 bits (413), Expect = 4e-42
Identities = 77/84 (91%), Positives = 83/84 (98%)
Frame = +2
Query: 254 AFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 433
+FGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 58 SFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 117
Query: 434 YDPSIGIYGLDFYVVLGRPGFNVA 505
YDPSIGIYGLDFYVVLGRPGF++A
Sbjct: 118 YDPSIGIYGLDFYVVLGRPGFSIA 141
Score = 94.7 bits (225), Expect = 3e-19
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = +3
Query: 105 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 254
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVR
Sbjct: 8 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVR 57
Score = 51.6 bits (118), Expect = 2e-06
Identities = 19/34 (55%), Positives = 28/34 (82%)
Frame = +1
Query: 493 FQRSTRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 594
F + ++R+TG +G HR++KE+AM+WFQQKYDG
Sbjct: 138 FSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDG 171
>AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting
protein 34 protein.
Length = 177
Score = 170 bits (413), Expect = 4e-42
Identities = 77/84 (91%), Positives = 83/84 (98%)
Frame = +2
Query: 254 AFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 433
+FGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 58 SFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 117
Query: 434 YDPSIGIYGLDFYVVLGRPGFNVA 505
YDPSIGIYGLDFYVVLGRPGF++A
Sbjct: 118 YDPSIGIYGLDFYVVLGRPGFSIA 141
Score = 92.7 bits (220), Expect = 1e-18
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = +3
Query: 105 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 254
+N MR L IRKLCLNICVGESGDRL RAAKVLEQLTGQ PVFSKARYTVR
Sbjct: 8 ENPMRELRIRKLCLNICVGESGDRLARAAKVLEQLTGQTPVFSKARYTVR 57
Score = 51.6 bits (118), Expect = 2e-06
Identities = 19/34 (55%), Positives = 28/34 (82%)
Frame = +1
Query: 493 FQRSTRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 594
F + ++R+TG +G HR++KE+AM+WFQQKYDG
Sbjct: 138 FSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDG 171
>AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11
protein.
Length = 174
Score = 170 bits (413), Expect = 4e-42
Identities = 77/84 (91%), Positives = 83/84 (98%)
Frame = +2
Query: 254 AFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 433
+FGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 57 SFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 116
Query: 434 YDPSIGIYGLDFYVVLGRPGFNVA 505
YDPSIGIYGLDFYVVLGRPGF++A
Sbjct: 117 YDPSIGIYGLDFYVVLGRPGFSIA 140
Score = 94.7 bits (225), Expect = 3e-19
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = +3
Query: 105 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 254
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVR
Sbjct: 7 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVR 56
Score = 44.0 bits (99), Expect = 5e-04
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +1
Query: 493 FQRSTRRRKTGKVGFPHRLTKEDAMKWFQQK 585
F + ++R+TG +G HR++KE+AM+WFQQK
Sbjct: 137 FSIADKKRRTGCIGAKHRISKEEAMRWFQQK 167
>AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 170 bits (413), Expect = 4e-42
Identities = 77/84 (91%), Positives = 83/84 (98%)
Frame = +2
Query: 254 AFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 433
+FGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 59 SFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 118
Query: 434 YDPSIGIYGLDFYVVLGRPGFNVA 505
YDPSIGIYGLDFYVVLGRPGF++A
Sbjct: 119 YDPSIGIYGLDFYVVLGRPGFSIA 142
Score = 94.7 bits (225), Expect = 3e-19
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = +3
Query: 105 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 254
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVR
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVR 58
Score = 51.6 bits (118), Expect = 2e-06
Identities = 19/34 (55%), Positives = 28/34 (82%)
Frame = +1
Query: 493 FQRSTRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 594
F + ++R+TG +G HR++KE+AM+WFQQKYDG
Sbjct: 139 FSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDG 172
>AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen
KW-12 protein.
Length = 176
Score = 170 bits (413), Expect = 4e-42
Identities = 77/84 (91%), Positives = 83/84 (98%)
Frame = +2
Query: 254 AFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 433
+FGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 57 SFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 116
Query: 434 YDPSIGIYGLDFYVVLGRPGFNVA 505
YDPSIGIYGLDFYVVLGRPGF++A
Sbjct: 117 YDPSIGIYGLDFYVVLGRPGFSIA 140
Score = 94.7 bits (225), Expect = 3e-19
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = +3
Query: 105 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 254
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVR
Sbjct: 7 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVR 56
Score = 51.6 bits (118), Expect = 2e-06
Identities = 19/34 (55%), Positives = 28/34 (82%)
Frame = +1
Query: 493 FQRSTRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 594
F + ++R+TG +G HR++KE+AM+WFQQKYDG
Sbjct: 137 FSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDG 170
>AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 170 bits (413), Expect = 4e-42
Identities = 77/84 (91%), Positives = 83/84 (98%)
Frame = +2
Query: 254 AFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 433
+FGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 58 SFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 117
Query: 434 YDPSIGIYGLDFYVVLGRPGFNVA 505
YDPSIGIYGLDFYVVLGRPGF++A
Sbjct: 118 YDPSIGIYGLDFYVVLGRPGFSIA 141
Score = 94.7 bits (225), Expect = 3e-19
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = +3
Query: 105 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 254
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVR
Sbjct: 8 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVR 57
Score = 51.6 bits (118), Expect = 2e-06
Identities = 19/34 (55%), Positives = 28/34 (82%)
Frame = +1
Query: 493 FQRSTRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 594
F + ++R+TG +G HR++KE+AM+WFQQKYDG
Sbjct: 138 FSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDG 171
>X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 163 bits (396), Expect = 5e-40
Identities = 74/84 (88%), Positives = 81/84 (96%)
Frame = +2
Query: 254 AFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 433
+FGIRRNEKIAVHC VRGAKAEEILE+GLKVRE ELR++NFS TGNFGFGIQEHIDLGI+
Sbjct: 59 SFGIRRNEKIAVHCAVRGAKAEEILEKGLKVRELELRKNNFSDTGNFGFGIQEHIDLGIE 118
Query: 434 YDPSIGIYGLDFYVVLGRPGFNVA 505
YDPSIGIYGLDFYVVLGRPGF++A
Sbjct: 119 YDPSIGIYGLDFYVVLGRPGFSIA 142
Score = 91.9 bits (218), Expect = 2e-18
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = +3
Query: 105 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 254
+N MR L IRKLCLNICVGESG RLTRAAKVLEQLTGQ PVFSKARYTVR
Sbjct: 9 ENPMRELRIRKLCLNICVGESGGRLTRAAKVLEQLTGQTPVFSKARYTVR 58
Score = 51.6 bits (118), Expect = 2e-06
Identities = 19/34 (55%), Positives = 28/34 (82%)
Frame = +1
Query: 493 FQRSTRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 594
F + ++R+TG +G HR++KE+AM+WFQQKYDG
Sbjct: 139 FSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDG 172
>AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11
protein.
Length = 131
Score = 153 bits (371), Expect = 5e-37
Identities = 70/75 (93%), Positives = 74/75 (98%)
Frame = +2
Query: 254 AFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 433
+FGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 57 SFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 116
Query: 434 YDPSIGIYGLDFYVV 478
YDPSIGIYGLDFYVV
Sbjct: 117 YDPSIGIYGLDFYVV 131
Score = 94.7 bits (225), Expect = 3e-19
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = +3
Query: 105 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 254
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVR
Sbjct: 7 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVR 56
>AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11
protein.
Length = 36
Score = 74.9 bits (176), Expect = 2e-13
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +3
Query: 129 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSK 236
IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSK
Sbjct: 1 IRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSK 36
>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens cDNA
FLJ46149 fis, clone TESTI4000621, moderately similar to
Homo sapiens Snf2-related CBP activator protein (SRCAP).
).
Length = 2427
Score = 29.9 bits (64), Expect = 8.6
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -3
Query: 441 GSYLIPKSMCS*IPKPKLPVAEKLSRRNSYSLTFKPLSRISSALAPRTVQ 292
G L P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 1737 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 1786
>AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens
cDNA FLJ44499 fis, clone UTERU3000665, highly similar
to Homo sapiens Snf2-related CBP activator protein
(SRCAP). ).
Length = 559
Score = 29.9 bits (64), Expect = 8.6
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -3
Query: 441 GSYLIPKSMCS*IPKPKLPVAEKLSRRNSYSLTFKPLSRISSALAPRTVQ 292
G L P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 386 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 435
>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
SRCAP protein.
Length = 2971
Score = 29.9 bits (64), Expect = 8.6
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -3
Query: 441 GSYLIPKSMCS*IPKPKLPVAEKLSRRNSYSLTFKPLSRISSALAPRTVQ 292
G L P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 1478 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 1527
>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
Length = 3053
Score = 29.9 bits (64), Expect = 8.6
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -3
Query: 441 GSYLIPKSMCS*IPKPKLPVAEKLSRRNSYSLTFKPLSRISSALAPRTVQ 292
G L P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 1560 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 1609
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,450,052
Number of Sequences: 237096
Number of extensions: 1896334
Number of successful extensions: 11751
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 11623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11751
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -