Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10418
         (753 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.    173   4e-45
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   4.4  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score =  173 bits (422), Expect = 4e-45
 Identities = 85/89 (95%), Positives = 85/89 (95%)
 Frame = +3

Query: 3   NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 182
           NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 25  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 84

Query: 183 TGKTITLEVEASDTIENVKAKIQDKREFP 269
           TGKTITLEVE SDTIENVKAKIQDK   P
Sbjct: 85  TGKTITLEVEPSDTIENVKAKIQDKEGIP 113



 Score =  173 bits (422), Expect = 4e-45
 Identities = 85/89 (95%), Positives = 85/89 (95%)
 Frame = +3

Query: 3   NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 182
           NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 101 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 160

Query: 183 TGKTITLEVEASDTIENVKAKIQDKREFP 269
           TGKTITLEVE SDTIENVKAKIQDK   P
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIP 189



 Score =  173 bits (421), Expect = 5e-45
 Identities = 86/93 (92%), Positives = 88/93 (94%)
 Frame = +2

Query: 230 KCESQDSGQEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 409
           K + QD  +EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 27  KAKIQD--KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 84

Query: 410 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ 508
           TGKTITLEVE SDTIENVKAKIQDKEGIPPDQQ
Sbjct: 85  TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 117



 Score =  173 bits (421), Expect = 5e-45
 Identities = 86/93 (92%), Positives = 88/93 (94%)
 Frame = +2

Query: 230 KCESQDSGQEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 409
           K + QD  +EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 103 KAKIQD--KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 160

Query: 410 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ 508
           TGKTITLEVE SDTIENVKAKIQDKEGIPPDQQ
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 193



 Score =  165 bits (400), Expect = 2e-42
 Identities = 84/99 (84%), Positives = 86/99 (86%)
 Frame = +1

Query: 457 KCESQDSGQRGNSPRSAGLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 636
           K + QD  + G  P    LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 27  KAKIQD--KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 84

Query: 637 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFCG 753
           TGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIF G
Sbjct: 85  TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 123



 Score =  165 bits (400), Expect = 2e-42
 Identities = 84/99 (84%), Positives = 86/99 (86%)
 Frame = +1

Query: 457 KCESQDSGQRGNSPRSAGLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 636
           K + QD  + G  P    LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 103 KAKIQD--KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 160

Query: 637 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFCG 753
           TGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIF G
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 199



 Score =  110 bits (264), Expect = 5e-26
 Identities = 52/52 (100%), Positives = 52/52 (100%)
 Frame = +3

Query: 3   NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 158
           NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 177 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228



 Score = 93.9 bits (223), Expect = 5e-21
 Identities = 45/47 (95%), Positives = 45/47 (95%)
 Frame = +1

Query: 613 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFCG 753
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIF G
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 47



 Score = 93.9 bits (223), Expect = 5e-21
 Identities = 46/52 (88%), Positives = 48/52 (92%)
 Frame = +2

Query: 230 KCESQDSGQEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 385
           K + QD  +EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 179 KAKIQD--KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228



 Score = 83.8 bits (198), Expect = 5e-18
 Identities = 40/41 (97%), Positives = 40/41 (97%)
 Frame = +2

Query: 386 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ 508
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQ
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 41



 Score = 75.4 bits (177), Expect = 2e-15
 Identities = 39/52 (75%), Positives = 41/52 (78%)
 Frame = +1

Query: 457 KCESQDSGQRGNSPRSAGLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 612
           K + QD  + G  P    LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 179 KAKIQD--KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228



 Score = 67.7 bits (158), Expect = 4e-13
 Identities = 33/37 (89%), Positives = 33/37 (89%)
 Frame = +3

Query: 159 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKREFP 269
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDK   P
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 37


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 454  DGVRCFNFQCDGFTGKCFHK 395
            D +  +N  CD ++G CF K
Sbjct: 942  DPIGSYNASCDTYSGDCFCK 961


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 832,384
Number of Sequences: 2352
Number of extensions: 18191
Number of successful extensions: 34
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)