Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10416
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    29   0.041
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    29   0.041
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    29   0.041
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    29   0.041
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   2.0  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   2.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   6.2  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 29.1 bits (62), Expect = 0.041
 Identities = 13/35 (37%), Positives = 24/35 (68%)
 Frame = +3

Query: 282 NRRFDNQGCSRIRTEELDRLQR*QPNWSYEIVHNH 386
           NRR D++  + ++TE+LD +Q+ + +  YE + NH
Sbjct: 513 NRRRDDE--ADVKTEDLDEIQKEKGDEYYETISNH 545


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 29.1 bits (62), Expect = 0.041
 Identities = 13/35 (37%), Positives = 24/35 (68%)
 Frame = +3

Query: 282 NRRFDNQGCSRIRTEELDRLQR*QPNWSYEIVHNH 386
           NRR D++  + ++TE+LD +Q+ + +  YE + NH
Sbjct: 513 NRRRDDE--ADVKTEDLDEIQKEKGDEYYETISNH 545


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 29.1 bits (62), Expect = 0.041
 Identities = 13/35 (37%), Positives = 24/35 (68%)
 Frame = +3

Query: 282 NRRFDNQGCSRIRTEELDRLQR*QPNWSYEIVHNH 386
           NRR D++  + ++TE+LD +Q+ + +  YE + NH
Sbjct: 513 NRRRDDE--ADVKTEDLDEIQKEKGDEYYETISNH 545


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 29.1 bits (62), Expect = 0.041
 Identities = 13/35 (37%), Positives = 24/35 (68%)
 Frame = +3

Query: 282 NRRFDNQGCSRIRTEELDRLQR*QPNWSYEIVHNH 386
           NRR D++  + ++TE+LD +Q+ + +  YE + NH
Sbjct: 513 NRRRDDE--ADVKTEDLDEIQKEKGDEYYETISNH 545


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 16/57 (28%), Positives = 24/57 (42%)
 Frame = +2

Query: 77  SINLMFYVRGNKADYDEWAADGNEGWSFEDVLPYFKKSESFMGKFDAEATKYHSKGG 247
           SIN +     +KAD   +A     G++    LP    S S +G     +  YH+  G
Sbjct: 371 SINRLLPTAESKADIKMYADMHQYGYNTLSPLPSSVHSHSTIGNDYYNSPLYHTSAG 427


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 361 GVMKSFTTTKGGTRFSTARAFLSPIKDRKNLH 456
           G+      ++  TRF T   F + IK   NLH
Sbjct: 206 GIQALINDSRKVTRFPTELTFCNKIKHLVNLH 237


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/40 (22%), Positives = 16/40 (40%)
 Frame = +2

Query: 38   CAWPRGKVLGGSSSINLMFYVRGNKADYDEWAADGNEGWS 157
            C WP      G+S++N++  V   K      +      W+
Sbjct: 1320 CDWPEKATCDGTSNVNVVDIVTTAKPAQSTTSVSTTTSWN 1359


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +3

Query: 519 VLLNKGGRDIAVNVRKEVVVSAGAI 593
           ++LNK   +I++  RK+VV+  G +
Sbjct: 271 LVLNKHIDNISLRARKQVVLMLGTV 295


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,967
Number of Sequences: 336
Number of extensions: 4127
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)