Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10413
(805 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0075 - 558829-560859 159 3e-39
06_01_0668 - 4882174-4884204 159 3e-39
08_01_0387 - 3426058-3426168,3426279-3426473,3426612-3426724,342... 66 3e-11
07_03_1353 - 25966332-25966421,25966477-25966528,25966612-259668... 52 7e-07
11_08_0079 + 28189782-28189907,28190445-28190553,28190876-281909... 45 6e-05
05_03_0671 + 16831185-16831254,16832017-16832084,16832318-168323... 45 6e-05
11_06_0499 + 24354810-24355212,24355677-24355735,24355846-243559... 36 0.050
07_03_1626 + 28223967-28225294,28225506-28225779,28225939-282262... 34 0.15
05_07_0147 - 28022018-28022104,28022207-28022287,28022513-280226... 34 0.15
03_06_0323 + 33121062-33121653,33121748-33121839,33122482-331225... 34 0.15
12_01_0610 + 5030130-5030247,5030957-5033193 33 0.27
03_02_1011 + 13198641-13198899,13199471-13199604,13199805-131999... 33 0.27
02_04_0230 + 21103524-21103746,21105393-21105661,21105845-211060... 33 0.27
11_04_0165 + 14305885-14306007,14306538-14306642,14306792-143068... 33 0.35
10_08_1002 + 22160109-22160264,22160374-22160484,22160612-221606... 33 0.35
08_01_0664 + 5741111-5741113,5741491-5741658,5741741-5741864,574... 33 0.35
05_04_0401 - 20982923-20983106,20983129-20983186,20983322-209835... 32 0.46
01_04_0053 - 15444421-15444747,15444905-15445116,15445198-154453... 32 0.46
11_06_0250 + 21701741-21701826,21702094-21702246,21703060-217031... 31 1.1
08_02_0627 + 19449196-19449651,19449723-19449861,19450260-194503... 31 1.1
08_02_1310 - 26037025-26038074 29 5.7
06_01_0409 + 2926072-2926275,2926423-2926484,2926598-2926638,292... 29 5.7
01_01_0723 + 5651593-5651751,5651896-5651957,5652130-5652170,565... 29 5.7
11_02_0047 + 7716315-7716420,7716518-7716647,7716785-7716856,771... 28 7.6
06_01_0411 + 2939148-2939354,2939517-2939578,2939712-2939752,294... 28 7.6
01_01_0879 + 6896587-6896701,6896819-6897005,6897475-6897774,689... 28 7.6
>07_01_0075 - 558829-560859
Length = 676
Score = 159 bits (385), Expect = 3e-39
Identities = 70/92 (76%), Positives = 82/92 (89%)
Frame = +1
Query: 508 EQVRQHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTG 687
EQ+RQH+ARLPSIDP TRT++ICG+PNVGKSSF+NKITRADV+VQPYAFTTKSL+VGH
Sbjct: 152 EQIRQHMARLPSIDPNTRTLLICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHAD 211
Query: 688 YKYLRWQVIDTPGILDHPLEETQCYEMPAVTA 783
YKYLR+QVIDTPGILD P E+ EM ++TA
Sbjct: 212 YKYLRYQVIDTPGILDRPFEDRNIIEMCSITA 243
Score = 134 bits (323), Expect = 1e-31
Identities = 58/86 (67%), Positives = 73/86 (84%)
Frame = +2
Query: 257 EFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGDSLYRCK 436
+FP+LD +HPFY DL++VLY+KDHYKL LGQ+NTAR++I +AKDY+RLLKYGDSLYRCK
Sbjct: 68 DFPRLDGIHPFYGDLLHVLYNKDHYKLALGQINTARNIIAKIAKDYLRLLKYGDSLYRCK 127
Query: 437 QLKRAALGRMATIMKRQGANLTYLNR 514
LK AALGRM T++KR +L YL +
Sbjct: 128 CLKVAALGRMCTVIKRISPSLAYLEQ 153
Score = 104 bits (250), Expect = 7e-23
Identities = 48/66 (72%), Positives = 56/66 (84%)
Frame = +3
Query: 57 MSLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHD 236
M YNFK+I VVP KDFIDIILS+TQR+TPTVVHK Y ISRIR FY+RKVKYTQ NF++
Sbjct: 1 MVQYNFKRITVVPPGKDFIDIILSRTQRQTPTVVHKGYAISRIRQFYMRKVKYTQSNFYE 60
Query: 237 RLSRII 254
+LS +I
Sbjct: 61 KLSTVI 66
>06_01_0668 - 4882174-4884204
Length = 676
Score = 159 bits (385), Expect = 3e-39
Identities = 70/92 (76%), Positives = 82/92 (89%)
Frame = +1
Query: 508 EQVRQHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTG 687
EQ+RQH+ARLPSIDP TRT++ICG+PNVGKSSF+NKITRADV+VQPYAFTTKSL+VGH
Sbjct: 152 EQIRQHMARLPSIDPNTRTLLICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHAD 211
Query: 688 YKYLRWQVIDTPGILDHPLEETQCYEMPAVTA 783
YKYLR+QVIDTPGILD P E+ EM ++TA
Sbjct: 212 YKYLRYQVIDTPGILDRPFEDRNIIEMCSITA 243
Score = 136 bits (330), Expect = 1e-32
Identities = 59/86 (68%), Positives = 74/86 (86%)
Frame = +2
Query: 257 EFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGDSLYRCK 436
+FP+LDD+HPFY DL++VLY+KDHYKL LGQ+NTAR++I +AKDY+RLLKYGDSLYRCK
Sbjct: 68 DFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNIIAKIAKDYLRLLKYGDSLYRCK 127
Query: 437 QLKRAALGRMATIMKRQGANLTYLNR 514
LK AALGRM T++KR +L YL +
Sbjct: 128 CLKVAALGRMCTVIKRISPSLAYLEQ 153
Score = 105 bits (251), Expect = 5e-23
Identities = 48/66 (72%), Positives = 56/66 (84%)
Frame = +3
Query: 57 MSLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHD 236
M YNFK+I VVP KDFIDIILS+TQR+TPTVVHK Y ISRIR FY+RKVKYTQ NF++
Sbjct: 1 MVQYNFKRITVVPPGKDFIDIILSRTQRQTPTVVHKGYSISRIRQFYMRKVKYTQSNFYE 60
Query: 237 RLSRII 254
+LS +I
Sbjct: 61 KLSTVI 66
>08_01_0387 -
3426058-3426168,3426279-3426473,3426612-3426724,
3427121-3427157,3427270-3427341,3427849-3427962,
3428129-3428200,3428343-3428381,3429340-3429414,
3429561-3429674,3429749-3429813,3429927-3430047,
3430942-3431063,3431547-3431634
Length = 445
Score = 66.1 bits (154), Expect = 3e-11
Identities = 30/79 (37%), Positives = 47/79 (59%)
Frame = +1
Query: 514 VRQHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTGYK 693
+ + L +P +DP+ T+ + G PNVGKSS + ++ EV Y FTT+ + +GH
Sbjct: 230 IAKTLRSMPVVDPHIPTLCLVGSPNVGKSSLVRILSSGKPEVCSYPFTTRGILMGHIVSN 289
Query: 694 YLRWQVIDTPGILDHPLEE 750
+ R+QV DTPG+L +E
Sbjct: 290 HERFQVTDTPGLLTRDDDE 308
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/68 (25%), Positives = 37/68 (54%)
Frame = +2
Query: 260 FPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGDSLYRCKQ 439
FPK D+HP+ L+ + + + +Y+ + +++ R I++V K + + SL + +
Sbjct: 145 FPKRRDLHPYERSLIELTFGEGYYEKVIARVDALRKKINSVGKQHASVC--AKSLTKREA 202
Query: 440 LKRAALGR 463
+R + GR
Sbjct: 203 EERLSEGR 210
>07_03_1353 -
25966332-25966421,25966477-25966528,25966612-25966803,
25966900-25967199,25967816-25967925,25968696-25968755,
25968835-25968906,25969172-25969348,25969845-25969898,
25970188-25970217,25970985-25971026
Length = 392
Score = 51.6 bits (118), Expect = 7e-07
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +1
Query: 571 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTGYKYLRWQVIDTPGILD 735
+ GFP+VGKS+ +NK+T EV Y FTT + G YK + Q++D PGI++
Sbjct: 80 LVGFPSVGKSTLLNKLTGTFSEVAAYEFTTLTCIPGVIMYKGAKIQLLDLPGIIE 134
>11_08_0079 +
28189782-28189907,28190445-28190553,28190876-28190958,
28191500-28191562,28191658-28192854,28193247-28193310,
28193338-28193426,28194404-28194463,28195442-28195547,
28196057-28196069,28196940-28197111
Length = 693
Score = 45.2 bits (102), Expect = 6e-05
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +1
Query: 571 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTGYK-YLRWQVIDTPGIL 732
+ G PN GKS+ ++ ++RA E+ YAFTT +G Y+ Y +V D PG++
Sbjct: 344 LVGMPNAGKSTLLSALSRARPEIADYAFTTLRPNIGSLTYEDYFSVKVADIPGLI 398
>05_03_0671 +
16831185-16831254,16832017-16832084,16832318-16832394,
16832910-16833090,16833192-16833248,16834182-16834256,
16834820-16834939,16835018-16835224
Length = 284
Score = 45.2 bits (102), Expect = 6e-05
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +1
Query: 565 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTGYKYLRWQVIDTPGILD 735
+ + GFP+VGKS+ + +T E Y FTT + G Y + Q++D PGI++
Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIQYNDTKIQLLDLPGIIE 121
>11_06_0499 +
24354810-24355212,24355677-24355735,24355846-24355929,
24356040-24356337,24357026-24357203,24357686-24357746,
24358209-24358391,24358581-24358742,24358844-24359037,
24359354-24359504,24359551-24359578,24359845-24360117,
24360660-24360724
Length = 712
Score = 35.5 bits (78), Expect = 0.050
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +1
Query: 553 YTRTIIICGFPNVGKSSFINKITRAD-VEVQPYAFTTK-SLYVGHTGYKYLRWQVIDTPG 726
Y I I G PNVGKSS +N + D V P + TT+ ++ T ++++IDT G
Sbjct: 372 YIPAIAIVGRPNVGKSSILNALVGEDRTIVSPVSGTTRDAIDTEFTTEDGQKYKLIDTAG 431
Query: 727 I 729
I
Sbjct: 432 I 432
Score = 32.7 bits (71), Expect = 0.35
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +1
Query: 565 IIICGFPNVGKSSFINKI---TRADVEVQPYAFTTKSLYVGHTGYKYLRWQVIDTPGILD 735
+ I G PNVGKS+ N++ RA V +P T LY G + + + VIDT G++
Sbjct: 163 VAIIGRPNVGKSALFNRLVGGNRAIVVDEP-GVTRDRLY-GRSYWGDREFMVIDTGGVIT 220
Query: 736 HPLEETQCYEMPAVT 780
+ E A+T
Sbjct: 221 LSKSQAGVMEELAIT 235
>07_03_1626 +
28223967-28225294,28225506-28225779,28225939-28226230,
28226492-28226651,28226809-28226917,28227004-28227099
Length = 752
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 571 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTGYKYLRWQVI-DTPGILD 735
I G PN GKS+ + I+ A + Y FTT +G + V+ D PG+L+
Sbjct: 457 IVGAPNAGKSTLLTAISAAKPTIANYPFTTLLPNLGVVSLDFDATMVVADLPGLLE 512
>05_07_0147 -
28022018-28022104,28022207-28022287,28022513-28022614,
28022701-28022799,28023060-28023185,28023272-28023385,
28023478-28023618,28023717-28023862,28024011-28024386
Length = 423
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 565 IIICGFPNVGKSSFINKITRADVE-VQPYAFTTKSLYVGHTGYKYLRWQVIDTPGILDHP 741
+ + G PNVGKS+ IN+I + V TT+ +G + + DTPG++
Sbjct: 128 VAVLGKPNVGKSTLINQIVGQKLSIVTDKPQTTRHRILGICSEPEYQIILYDTPGVIKKE 187
Query: 742 LEETQCYEMPAVTAFGSSQSC 804
+ + M V + S C
Sbjct: 188 MHKLDTMMMKNVRSAVGSADC 208
>03_06_0323 +
33121062-33121653,33121748-33121839,33122482-33122565,
33123126-33123203,33123500-33123700,33123821-33123928,
33124145-33124219,33124338-33124537,33124654-33124722,
33125159-33125279,33126840-33127120,33127522-33127594
Length = 657
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 571 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTG 687
+ G PN GKS+ ++ IT A ++ Y FTT +G G
Sbjct: 281 LVGLPNAGKSTLLSAITLARPDIADYPFTTLMPNLGRLG 319
>12_01_0610 + 5030130-5030247,5030957-5033193
Length = 784
Score = 33.1 bits (72), Expect = 0.27
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 538 PSIDPYTRTIIICGFPNVGKSSFINKI-TRADVEVQPYAFTTKSLYVGHTGYKYLRWQVI 714
P +D R I++ G VGKS+ IN I V A T+ + K +R VI
Sbjct: 154 PDLDLPLR-ILLLGKTGVGKSATINSIFDEPKVATNALAPATERIRRIDGTIKGIRVTVI 212
Query: 715 DTPGILDH 738
DTPG+L H
Sbjct: 213 DTPGLLPH 220
>03_02_1011 +
13198641-13198899,13199471-13199604,13199805-13199934,
13200290-13200450,13200587-13200688,13200786-13200890,
13200965-13201093,13201180-13201320,13201855-13201955,
13202300-13202357,13202656-13202943
Length = 535
Score = 33.1 bits (72), Expect = 0.27
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +1
Query: 514 VRQHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRADV-EVQPYAFTTKS-LYVGHTG 687
V + ARL S D ++ G+PNVGKSS IN + V +V P TK Y+ T
Sbjct: 303 VLRQFARLKS-DKQAISVGFVGYPNVGKSSVINTLRSKSVCKVAPIPGETKVWQYITLTK 361
Query: 688 YKYLRWQVIDTPGIL 732
+L ID PG++
Sbjct: 362 RIFL----IDCPGVV 372
>02_04_0230 +
21103524-21103746,21105393-21105661,21105845-21106009,
21106081-21106203,21107261-21107473
Length = 330
Score = 33.1 bits (72), Expect = 0.27
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 535 LPSIDPYTRTIIICGFPNVGKSSFINKITRADVEVQPY--AFTTKSLYVGHTGYKYLR-W 705
LPS D T+++CG GKS+ N I + V Y A T + + T K R
Sbjct: 12 LPSADI---TVVLCGKLGCGKSATGNSIVGREAFVSEYSHASVTSTCQLASTALKDGRTL 68
Query: 706 QVIDTPGILD 735
VIDTPG+ +
Sbjct: 69 NVIDTPGLFE 78
>11_04_0165 +
14305885-14306007,14306538-14306642,14306792-14306869,
14307710-14307757,14308173-14308314,14308394-14308464,
14309210-14309306,14309517-14309728,14311995-14312267
Length = 382
Score = 32.7 bits (71), Expect = 0.35
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Frame = +1
Query: 556 TRTIIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGH--------TGYKYLRW-- 705
T +++ G PNVGKS+ IN I R P K VG GYK
Sbjct: 136 TLLVMVVGVPNVGKSALINSIHRIVTSRFPVQDKNKRATVGPLPGVTQDIAGYKISSQPS 195
Query: 706 -QVIDTPGIL 732
V+DTPG+L
Sbjct: 196 IYVLDTPGVL 205
>10_08_1002 +
22160109-22160264,22160374-22160484,22160612-22160689,
22160774-22160921,22161007-22161077,22161430-22161526,
22161603-22161790,22161960-22162223
Length = 370
Score = 32.7 bits (71), Expect = 0.35
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
Frame = +1
Query: 556 TRTIIICGFPNVGKSSFINKITR----ADVEVQPYAFTTKSLYVGHT----GYK---YLR 702
T T+++ G PNVGKS+ +N + R E S + G T GYK +
Sbjct: 135 TGTVLLVGIPNVGKSAIVNAMHRIGRIGAAEKGKLKHAIVSSHPGETKDISGYKVASHPN 194
Query: 703 WQVIDTPGIL 732
V+DTPG+L
Sbjct: 195 IYVLDTPGVL 204
>08_01_0664 +
5741111-5741113,5741491-5741658,5741741-5741864,
5742078-5742169,5742254-5742352,5742476-5742589,
5743190-5743254,5743342-5743467,5743870-5743945,
5744502-5744594,5744944-5744994,5745084-5745182
Length = 369
Score = 32.7 bits (71), Expect = 0.35
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 577 GFPNVGKSSFINKITRADVEVQPYAFTT 660
G PNVGKS+F N +T+ + + + F T
Sbjct: 3 GLPNVGKSTFFNIVTKLSIPAENFPFCT 30
>05_04_0401 -
20982923-20983106,20983129-20983186,20983322-20983503,
20983637-20983752,20984148-20984234,20984334-20984477,
20984556-20984672,20984790-20984936,20985717-20985938,
20986919-20987072,20987583-20987632,20987870-20987921,
20987985-20988211
Length = 579
Score = 32.3 bits (70), Expect = 0.46
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 571 ICGFPNVGKSSFINK-ITRADVEVQPYAFTTKSLYVGHTGYKYLRWQVIDTPGIL 732
I G+PNVGKSS IN+ + R P T+ L G +++D+PGIL
Sbjct: 405 IVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGSDL---ELLDSPGIL 456
>01_04_0053 -
15444421-15444747,15444905-15445116,15445198-15445377,
15445572-15445836,15446308-15446522,15446611-15446784,
15446872-15447010,15447523-15447786
Length = 591
Score = 32.3 bits (70), Expect = 0.46
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 562 TIIICGFPNVGKSSFINKITRAD-VEVQPYAFTTKSLYVGHTGYKYLRWQVIDTPGIL 732
T+ I G PNVGKSS IN + R+ V V T+S+ K +++D PG++
Sbjct: 270 TVGIVGLPNVGKSSLINSLKRSRVVNVGSTPGVTRSMQEVQLDKKV---KLLDCPGVV 324
>11_06_0250 +
21701741-21701826,21702094-21702246,21703060-21703176,
21703288-21703402,21703604-21703624,21703710-21703757,
21704156-21704293,21704789-21704884,21704971-21705084,
21705364-21705432,21705613-21705683,21705785-21705878,
21706202-21706327,21706425-21706514,21706651-21706749
Length = 478
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 565 IIICGFPNVGKSSFINKITRADVEVQPYAFTT 660
+ + G+ N GKS+ +N++T ADV + F T
Sbjct: 256 VSLVGYTNAGKSTLLNRLTGADVLAEDKLFAT 287
>08_02_0627 +
19449196-19449651,19449723-19449861,19450260-19450381,
19450685-19450888,19450981-19451040,19451628-19451820,
19451880-19451998,19452189-19452413,19452534-19452728
Length = 570
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 565 IIICGFPNVGKSSFINKITRAD-VEVQPYAFTTKSLYVGHTGYKYLRWQVIDTPGI 729
+ I G PNVGKSS +N ++++ V A TT+ + + + ++DT GI
Sbjct: 308 VAIIGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVVEANVSIHGIPITLLDTAGI 363
>08_02_1310 - 26037025-26038074
Length = 349
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +2
Query: 305 NVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGDSLYRCKQLKRAALGRMA 469
++L + Y+LG +L + + L+DNV + V + Y C +LK+ L +A
Sbjct: 260 HLLAAAERYELGGLKLLSTKKLLDNVTPENVAGIIVCAETYGCPELKKKCLDYLA 314
>06_01_0409 +
2926072-2926275,2926423-2926484,2926598-2926638,
2927165-2927394
Length = 178
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +1
Query: 691 KYLRWQVIDTPGILDHPL-EETQCYEMPAVT 780
+YL W V D PG +E CYE P T
Sbjct: 85 EYLHWLVTDIPGTTGATFGQEVMCYESPRPT 115
>01_01_0723 +
5651593-5651751,5651896-5651957,5652130-5652170,
5654105-5654352
Length = 169
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +1
Query: 691 KYLRWQVIDTPGILDHPL-EETQCYEMPAVTA 783
+YL W V D PG D E CYE P A
Sbjct: 70 EYLHWLVTDIPGTTDANYGREVVCYESPRPAA 101
>11_02_0047 +
7716315-7716420,7716518-7716647,7716785-7716856,
7717007-7717078,7717274-7717345,7717684-7717845,
7718105-7718176,7718435-7718503,7718788-7718859,
7718992-7719129,7719386-7719888,7720007-7720171,
7720267-7720403,7720488-7720707,7720793-7721028,
7721165-7721632
Length = 897
Score = 28.3 bits (60), Expect = 7.6
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 757 IAFLPMDDPRFQGCLSPAISNICNQY 680
+ FL +++ RF G + P+I N+ N Y
Sbjct: 148 LRFLSLNNNRFTGSIPPSIGNLSNMY 173
>06_01_0411 +
2939148-2939354,2939517-2939578,2939712-2939752,
2941060-2941289
Length = 179
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +1
Query: 691 KYLRWQVIDTPGILDHPL-EETQCYEMPAVT 780
+YL W V D PG +E CYE P T
Sbjct: 86 EYLHWLVTDIPGTTAASFGQEVMCYESPRPT 116
>01_01_0879 +
6896587-6896701,6896819-6897005,6897475-6897774,
6897877-6898133,6898596-6898825,6899122-6899247,
6900195-6900374,6901079-6901216,6901515-6901670,
6902409-6902699,6902923-6903162
Length = 739
Score = 28.3 bits (60), Expect = 7.6
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 562 TIIICGFPNVGKSSFINKI 618
T+I+ G PNVGKS+ N++
Sbjct: 84 TVILVGRPNVGKSALFNRV 102
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,980,977
Number of Sequences: 37544
Number of extensions: 473077
Number of successful extensions: 1205
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -