Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10411
(769 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 36 0.006
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 36 0.008
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 34 0.026
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 31 0.14
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 31 0.18
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 30 0.32
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 30 0.32
SPCC1682.07 |ssl1||transcription factor TFIIH complex subunit Ss... 30 0.32
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 29 0.97
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 28 1.3
SPAC57A7.13 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 28 1.3
SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family |Schizos... 28 1.7
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 27 3.0
SPAC5H10.01 |||DUF1445 family protein|Schizosaccharomyces pombe|... 27 3.9
SPAC57A10.14 |sgf11||SAGA complex subunit Sgf11 |Schizosaccharom... 27 3.9
SPBC1683.07 |mal1||alpha-glucosidase Mal1 |Schizosaccharomyces p... 27 3.9
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 27 3.9
SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr 3||... 27 3.9
SPBC1289.02c |uap2||U2 snRNP-associated protein Uap2|Schizosacch... 26 6.8
SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr... 26 6.8
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 26 6.8
SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces pombe... 26 6.8
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 25 9.0
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 25 9.0
SPCC965.11c |||amino acid transporter |Schizosaccharomyces pombe... 25 9.0
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 35.9 bits (79), Expect = 0.006
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = +3
Query: 252 LLQHVELNHSTLPN--SVACTK--CKVRCPNETVLKEHIETIHK-RASYVCPECNKEFVR 416
L HV L+ +TL + C CK + LK+HI IH+ ++ C C +F
Sbjct: 219 LRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGY 278
Query: 417 RSHVTRHMTQSGC-NGHQLNLYPCEV 491
+ + RH+ + C H+ + C +
Sbjct: 279 KHMLQRHLERGTCKKAHKPYINECGI 304
Score = 29.1 bits (62), Expect = 0.73
Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 6/121 (4%)
Frame = +3
Query: 105 RVYVC--TMCKKSCDEDKWESHVEIC-RISSNIKVPTILLQRMWQEV*VQKELLQHVELN 275
R +VC T C K+ +SH++I R +N+K + + Q+ L +H+E++
Sbjct: 51 RPFVCDYTGCSKAFYR---KSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVH 107
Query: 276 HSTLPNSVACTKCKVRCPNETVLKEHIETIHKR-ASYVC--PECNKEFVRRSHVTRHMTQ 446
P + C L+ HI H Y C +C F + + H+ +
Sbjct: 108 RKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNR 167
Query: 447 S 449
+
Sbjct: 168 A 168
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 35.5 bits (78), Expect = 0.008
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 378 SYVCPECNKEFVRRSHVTRHM 440
S+VCPEC+K+F R H+ RH+
Sbjct: 422 SFVCPECSKKFKRSEHLRRHI 442
Score = 32.3 bits (70), Expect = 0.078
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 294 SVACTKCKVRCPNETVLKEHIETIH-KRASYVCPECNKEFVRRSHVTRH 437
S C +C + L+ HI ++H +VC C K F RR ++ +H
Sbjct: 422 SFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQH 469
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 33.9 bits (74), Expect = 0.026
Identities = 21/67 (31%), Positives = 28/67 (41%)
Frame = +3
Query: 261 HVELNHSTLPNSVACTKCKVRCPNETVLKEHIETIHKRASYVCPECNKEFVRRSHVTRHM 440
H++ + S P C CK LK H+ YVC EC K F R + RH
Sbjct: 463 HIQTHLSDRP--YRCDLCKAGFVRHHDLKRHLRIHENGRPYVC-ECLKRFNRLDALNRHK 519
Query: 441 TQSGCNG 461
++ C G
Sbjct: 520 QRNICVG 526
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +3
Query: 312 CKVRCPNETVLKEHIETIHKRASYVCPECNKEFVRRSHVTRHM 440
C R + ++ HI+T Y C C FVR + RH+
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHL 492
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 31.5 bits (68), Expect = 0.14
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +3
Query: 381 YVCPECNKEFVRRSHVTRHM-TQSGCNGHQLNLYPC 485
Y CP C K F R H TRH+ T +G H C
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGC 61
Score = 30.3 bits (65), Expect = 0.32
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 303 CTKCKVRCPNETVLKEHIETIHKRASYVC--PECNKEFVRRSHVTRH 437
CTK R ++T HI T +VC P C K F R +TRH
Sbjct: 31 CTKAFYRLEHQT---RHIRTHTGEKPHVCTFPGCAKRFSRSDELTRH 74
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 31.1 bits (67), Expect = 0.18
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = +3
Query: 324 CPNETVLKEHI---ETIHKRA-SYVCPECNKEFVRRSHVTRHMTQ 446
CP KEH+ E H+ ++ C CN+ F R + RH+ Q
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQ 77
Score = 26.2 bits (55), Expect = 5.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 390 PECNKEFVRRSHVTRH 437
P+C K F R+ H+ RH
Sbjct: 31 PDCPKSFTRKEHLRRH 46
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 30.3 bits (65), Expect = 0.32
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +3
Query: 303 CTKCKVRCPNETVLKEHIETIHKRASYVCPECNKEFVRRSHVTRHMTQ 446
CTK R + + H + +++CP C+ F R + RH+ Q
Sbjct: 24 CTKSFTRKEHA---RRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQ 68
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 30.3 bits (65), Expect = 0.32
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +3
Query: 297 VACTKCKVRCPNETVLKEHIETIHKRASYV 386
+ C C+++C + +LK HI+ H S +
Sbjct: 59 IPCPYCEIKCKRKDLLKRHIQRFHNDKSVI 88
Score = 26.6 bits (56), Expect = 3.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 363 IHKRASYVCPECNKEFVRRSHVTRH 437
I + + C +C K F R ++TRH
Sbjct: 25 IDSKRVFPCDQCAKRFTRHENLTRH 49
>SPCC1682.07 |ssl1||transcription factor TFIIH complex subunit
Ssl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 30.3 bits (65), Expect = 0.32
Identities = 20/67 (29%), Positives = 23/67 (34%)
Frame = +3
Query: 267 ELNHSTLPNSVACTKCKVRCPNETVLKEHIETIHKRASYVCPECNKEFVRRSHVTRHMTQ 446
E+ S P S C C++ P V T R Y CP C F V H
Sbjct: 353 EIPWSANPKSTHCFACQLPFPKPPVSPFDESTSSMR--YACPSCKNHFCLDCDVFAHEQL 410
Query: 447 SGCNGHQ 467
C G Q
Sbjct: 411 HECYGCQ 417
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 28.7 bits (61), Expect = 0.97
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +3
Query: 273 NHSTLPNSVACTKCKVRCPNETVLKEHIETIHKRASYVCPECNKEFVRRSHVTRHM 440
+++ P+SV + K + K+ K YVC C + F R H+ RH+
Sbjct: 35 SNANTPSSVT-SNSKPVASSTAAKKDPNAPPQKVKQYVCETCTRAFARLEHLKRHI 89
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 28.3 bits (60), Expect = 1.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 378 SYVCPECNKEFVRRSHVTRHM 440
SY CP C + F R+ H RH+
Sbjct: 3 SYECPFCKRVFHRQEHQVRHI 23
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +3
Query: 294 SVACTKCKVRCPNETVLKEHIETIHKRASYVC--PECNKEFVRRSHVTRHM 440
S C CK + HI + + C P C K F RR + RH+
Sbjct: 3 SYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHV 53
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +3
Query: 243 QKELLQHVELNHSTLPNSVACTKCKVRCPNETVLKEHIETIHKRASYVCPE 395
Q+ ++H+ + P + CK R L H+ T H R + V PE
Sbjct: 16 QEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRT-HLRKALVTPE 65
>SPAC57A7.13 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 565
Score = 28.3 bits (60), Expect = 1.3
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 372 RASYVCPECNKEFVRRSHVTRHMTQSGCNGHQL 470
+++ +C C ++F HV +H+TQS + + L
Sbjct: 401 KSALICVLCERKFQSWGHVVKHITQSIMHNNNL 433
>SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 482
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +3
Query: 282 TLPNSVACTKCKVRCPNETVLKEHIETIHKRASYVCPECNKEFV 413
TL +A C+ C ++ +E I+T + + CP C+++ V
Sbjct: 283 TLCKKLARNACRTPCCDKLFCEECIQTALLDSDFECPNCHRKDV 326
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = +3
Query: 312 CKVRCPNETVLKEHIETIHKRASYVCPECNKEFVRRSHVTRH 437
C R LK H+ T + C C K F R+ RH
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRH 618
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +3
Query: 270 LNHSTLPNSVACTKCKVRCPNETVLKEHIETIHKRA-SYVCPECNKEFVRRSHVTRH 437
+N T C+ CK + + H E +H ++ C CN+ F R + RH
Sbjct: 591 MNTHTNYRPFQCSICKKSFARQHDKRRH-EQLHTGIKAFACVTCNQRFARMDALNRH 646
>SPAC5H10.01 |||DUF1445 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 301
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 682 GYIQSNYIVLIYVTRMEFVNWC 747
GYIQ+N +VL R +FVN C
Sbjct: 67 GYIQANLLVLPAKYRDDFVNLC 88
>SPAC57A10.14 |sgf11||SAGA complex subunit Sgf11
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 117
Score = 26.6 bits (56), Expect = 3.9
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +3
Query: 111 YVCTMCKKSCDEDKWESHVEICR 179
Y C MCK+ ++ +H+E C+
Sbjct: 72 YSCLMCKREIAASRYAAHLEKCK 94
>SPBC1683.07 |mal1||alpha-glucosidase Mal1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 579
Score = 26.6 bits (56), Expect = 3.9
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 549 LDRGLEIF*LDLYIRLFTYLLHKDTNLTDDHYSHSVSY 436
LDRG++ F LD + D +TDD Y + ++Y
Sbjct: 202 LDRGVDGFRLDAINMISKDQRFLDAPITDDRYEYQLAY 239
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 572 NTLNTKVYNAIHTADKKERWGNXXXXXXXXXMQFWEEDISNLT 700
N +N +++ IH+ D ER+G + E D++NL+
Sbjct: 43 NDINRRIFELIHSHDSHERFGGILAIGKLIEFES-EGDVTNLS 84
>SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 26.6 bits (56), Expect = 3.9
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = -3
Query: 212 QYCWNLNIRTDTTDFYVTLPL---VLITGLFTHCT 117
QYCWN I + T Y L + + LFT+C+
Sbjct: 599 QYCWNGTIASTTVTTYAPTVLSAKIYKSRLFTYCS 633
>SPBC1289.02c |uap2||U2 snRNP-associated protein
Uap2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 18 GRPPGSKNKKLKSSNTD 68
G P GS+NKK KS N++
Sbjct: 85 GYPSGSRNKKSKSENSE 101
>SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 703
Score = 25.8 bits (54), Expect = 6.8
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -3
Query: 149 VLITGLFTHCTNINSSRINF--LFYIYWLICVA*LEFFVLGSW 27
V +G+F S +NF LF++ WL+ A VL SW
Sbjct: 548 VSFSGIFDRVEKSVISELNFSFLFFLLWLLICAFGLIGVLSSW 590
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 381 YVCPECNKEFVRRSHVTRHMTQSG 452
+ C CN+EF V HM Q G
Sbjct: 259 FTCLTCNREFKSLEAVRAHMQQKG 282
>SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 319
Score = 25.8 bits (54), Expect = 6.8
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +3
Query: 294 SVACTKCKVRCPNETVLKEHIETIHKRASYVCPECNK--EF--VRRSHVTRHMTQS 449
S C C V C N+ +L+EH+ +KR + P+ ++ EF + + VT+ +T S
Sbjct: 145 SFRCLCCHVPCKNKKLLREHMN--NKRHFRLDPKSSEYDEFYIINYASVTKSITIS 198
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 25.4 bits (53), Expect = 9.0
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +3
Query: 342 LKEHIETIHKRASYVC--PECNKEFVRRSHVTRHM 440
L H+ + ++C PEC++ F R + +HM
Sbjct: 93 LVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHM 127
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 25.4 bits (53), Expect = 9.0
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 99 SGRVY-VCTMCKKSCDEDKWESHVEICRISSNIKVP 203
SG V V C + + KW S +EI ++++++VP
Sbjct: 242 SGEVLPVSDYCNEIRNNSKWGSDIEIQALANSLEVP 277
>SPCC965.11c |||amino acid transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 537
Score = 25.4 bits (53), Expect = 9.0
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = -3
Query: 506 DYLHTYFTRIQI*LMTITATLCHMTSYMRTSYKFFVAFWAYIRSSFVYCLYVFLQNSFI 330
+Y+ + T I ++T+ L + ++ SY FF+ FW + + + VF ++ +I
Sbjct: 126 NYVIVWLTNIAAEYTSLTSILQYWGPHV-PSYGFFLIFWGFFTCYQMLGVSVFGESEYI 183
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,302,909
Number of Sequences: 5004
Number of extensions: 71221
Number of successful extensions: 279
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 276
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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