Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10411
(769 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g26190.1 68418.m03116 DC1 domain-containing protein contains ... 36 0.022
At5g22355.1 68418.m02608 DC1 domain-containing protein contains ... 34 0.091
At5g59940.1 68418.m07516 DC1 domain-containing protein / UV-B li... 33 0.21
At4g16015.1 68417.m02430 DC1 domain-containing protein contains ... 33 0.21
At5g05350.1 68418.m00576 expressed protein contains Pfam profile... 31 0.64
At4g01910.1 68417.m00251 DC1 domain-containing protein contains ... 31 0.64
At5g59930.1 68418.m07515 DC1 domain-containing protein / UV-B li... 31 0.85
At2g23100.1 68415.m02756 DC1 domain-containing protein contains ... 31 1.1
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 31 1.1
At1g55390.1 68414.m06335 DC1 domain-containing protein similar t... 31 1.1
At1g77300.1 68414.m09002 SET domain-containing protein similar t... 30 2.0
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 30 2.0
At5g59820.1 68418.m07500 zinc finger (C2H2 type) family protein ... 29 2.6
At4g16920.1 68417.m02552 disease resistance protein (TIR-NBS-LRR... 29 2.6
At4g15230.1 68417.m02333 ABC transporter family protein similar ... 29 2.6
At2g47530.1 68415.m05932 hypothetical protein 29 2.6
At5g42280.1 68418.m05146 DC1 domain-containing protein contains ... 29 3.4
At4g15215.1 68417.m02332 ABC transporter family protein similar ... 29 3.4
At4g01920.1 68417.m00255 DC1 domain-containing protein similar t... 29 3.4
At4g01350.1 68417.m00175 DC1 domain-containing protein contains ... 29 3.4
At3g28650.1 68416.m03576 DC1 domain-containing protein similar ... 29 3.4
At2g02690.1 68415.m00208 hypothetical protein 29 3.4
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 29 3.4
At5g37500.1 68418.m04516 guard cell outward rectifying K+ channe... 29 4.5
At5g25630.1 68418.m03050 pentatricopeptide (PPR) repeat-containi... 29 4.5
At4g10370.1 68417.m01702 DC1 domain-containing protein contains ... 29 4.5
At4g02540.1 68417.m00347 DC1 domain-containing protein contains ... 29 4.5
At4g01930.1 68417.m00257 DC1 domain-containing protein contains ... 29 4.5
At1g74250.1 68414.m08599 DNAJ heat shock N-terminal domain-conta... 29 4.5
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 29 4.5
At4g15233.1 68417.m02334 ABC transporter family protein similar ... 28 6.0
At4g19570.1 68417.m02877 DNAJ heat shock N-terminal domain-conta... 28 7.9
At4g15236.1 68417.m02335 ABC transporter family protein similar ... 28 7.9
At4g13130.1 68417.m02045 DC1 domain-containing protein contains ... 28 7.9
At4g01340.1 68417.m00174 CHP-rich zinc finger protein-related si... 28 7.9
At3g45840.1 68416.m04961 DC1 domain-containing protein contains ... 28 7.9
At2g31760.1 68415.m03878 zinc finger protein-related contains lo... 28 7.9
At1g55440.1 68414.m06341 DC1 domain-containing protein contains ... 28 7.9
At1g29180.1 68414.m03570 DC1 domain-containing protein contains ... 28 7.9
>At5g26190.1 68418.m03116 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 556
Score = 36.3 bits (80), Expect = 0.022
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 4/111 (3%)
Frame = +3
Query: 42 KKLKSSNTDQPIDIKQEVNSGRVYVCTMCKKSCDEDKWESHVEICRISSNIKVPTIL--- 212
K++ + N P+ ++ Y C +C+K D KW + C S + + +L
Sbjct: 428 KEVFNKNDKHPLYLRYSGYRYGNYWCEICEKPTDPRKWFYSCDKC--CSTLHIDCVLGKS 485
Query: 213 -LQRMWQEV*VQKELLQHVELNHSTLPNSVACTKCKVRCPNETVLKEHIET 362
R + Q V NH++ P CT C +RC + VLK ET
Sbjct: 486 PYMRPGHSFLLCSREFQVVSNNHTSRP---FCTICSLRCKDAFVLKSKDET 533
>At5g22355.1 68418.m02608 DC1 domain-containing protein contains
Pfam PF03107: DC1 domain; similar to ULI3 [Arabidopsis
thaliana] GI:17225050
Length = 664
Score = 34.3 bits (75), Expect = 0.091
Identities = 23/102 (22%), Positives = 44/102 (43%)
Frame = +3
Query: 42 KKLKSSNTDQPIDIKQEVNSGRVYVCTMCKKSCDEDKWESHVEICRISSNIKVPTILLQR 221
K +K S + P+ + N+ Y C +C+ D KW C ++++I+ R
Sbjct: 542 KTVKHSCDNHPLSLCYGENATGKYWCDICEAETDPSKWFYTCSKCVVTAHIECVLGDFSR 601
Query: 222 MWQEV*VQKELLQHVELNHSTLPNSVACTKCKVRCPNETVLK 347
+ + ++ VE+ ++ + C KC RC +LK
Sbjct: 602 LMPGRIINYNNVR-VEVVLNSYSSRPFCAKCHSRCRAPIILK 642
>At5g59940.1 68418.m07516 DC1 domain-containing protein / UV-B
light-insensitive protein, putative similar to ULI3
(UV-B light insensitive) [Arabidopsis thaliana]
GI:17225050; contains Pfam profile PF03107: DC1 domain
Length = 651
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Frame = +3
Query: 45 KLKSSNTDQPIDIKQEVNSGRVYVCTMCKKSCDEDKWESHVEICRISSNIK-----VPTI 209
K++ N + P+ + + Y C +C+ D KW C ++ +++ +
Sbjct: 527 KIRHRNDEHPLTLSCGETANGKYWCDICETELDPSKWFYTSFDCGVTLHVECVLGDFSRL 586
Query: 210 LLQRMWQEV*VQKELLQHVELNHSTLPNSVACTKCKVRCPNETVLK 347
+ RM V +K + V NH+T P C+ C+ RC +LK
Sbjct: 587 MPGRMVDTVGGKKFYV--VLNNHNTRP---LCSMCRSRCKVSVILK 627
>At4g16015.1 68417.m02430 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 535
Score = 33.1 bits (72), Expect = 0.21
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Frame = +3
Query: 42 KKLKSSNT-DQPIDIKQEVNSGRVYVCTMCKKSCDEDKWESHVEICRISSNIKVPTILLQ 218
K +K N D + + + Y C +C+++ + KW + C I+ +IK
Sbjct: 412 KMVKHKNDKDHLLSLCYGEKTSEQYWCEICEEALNAKKWFYSCDDCDITFHIKCTLGDFV 471
Query: 219 RMWQEV*VQKELLQHVELNHSTLPNSVACTKCKVRCPNETVLK 347
M+QE + + NH P C C+ RC ++L+
Sbjct: 472 GMYQEAKDESFQTYMILNNHINRP---VCCCCESRCQFSSILR 511
>At5g05350.1 68418.m00576 expressed protein contains Pfam profile
PF04749: Protein of unknown function, DUF614; expression
supported by MPSS
Length = 526
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 513 INLIKRSQGL-DPMCWPKQIATLLIPKSTMPYTLPIKKKDGETLSREG 653
++ + R G+ DP C PK++ T +I ST+ P ++KD L +G
Sbjct: 465 VSALPREDGVFDPSCLPKKMTTTMIASSTLS---PSRQKDETCLGEKG 509
>At4g01910.1 68417.m00251 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 651
Score = 31.5 bits (68), Expect = 0.64
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Frame = +3
Query: 66 DQPIDIKQEVNSGRVYVCTMCKKSCDEDKWESHVEICRISSNIKVPTILLQRMWQEV*VQ 245
D P+ + + + Y C +C+K + + W + R S +IK +L W +
Sbjct: 543 DHPLSLCFDKEASGKYWCDICEKETNPETWFYTCKDYRASLHIK--CVLGDFSWL---MP 597
Query: 246 KELLQHVELNHSTLPNSVA---CTKCKVRCPNETVLK 347
+ EL+ L NS++ C+ CK+ C +LK
Sbjct: 598 GSTIDLSELSKVVLNNSISRPFCSGCKMHCIFPIILK 634
>At5g59930.1 68418.m07515 DC1 domain-containing protein / UV-B
light-insensitive protein, putative similar to ULI3
(UV-B light insensitive) [Arabidopsis thaliana]
GI:17225050; contains Pfam profile PF03107: DC1 domain
Length = 656
Score = 31.1 bits (67), Expect = 0.85
Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Frame = +3
Query: 42 KKLKSSNTDQPIDIKQEVNSGRVYVCTMCKKSCDEDKWESHVEICRISSNIKVPTILLQR 221
KK++ SN + + + + Y C +C+ D KW C + +++ R
Sbjct: 532 KKIRHSNDEHILTLCCGEEANGKYWCDICEAELDPSKWFYTCFGCGGTLHVECVLGDFSR 591
Query: 222 MWQEV*VQKEL--LQHVELNHSTLPNSVACTKCKVRCPNETVLK 347
+ + + ++ V NH+T P C++C RC +LK
Sbjct: 592 LMPGCTIDYRVYTVEVVFNNHNTRP---MCSRCHSRCKVSVILK 632
>At2g23100.1 68415.m02756 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 711
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +3
Query: 111 YVCTMCKKSCDEDKWESHVEICRISSNIKVPTILLQRMWQEV*VQKELLQHVELNH-STL 287
Y C +C+ D +W + CR++ ++K + + V KE + LN +T
Sbjct: 598 YWCEICESKLDASEWFYTCDSCRVTLHLKCLLGNDMYIKPQHFVGKEGEIEIALNDGNTR 657
Query: 288 PNSVACTKCKVRCPNETVLK 347
P C+ C VRC + +V K
Sbjct: 658 P---FCSVCHVRCTDISVFK 674
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 348 EHIETIHKRASYVCPECNKEFVRRSHV 428
+H+E KR Y CP CN EF R HV
Sbjct: 98 KHLEG--KRYYYFCPLCNLEFHRGCHV 122
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 303 CTKCKVRCPNETVLKEHIETIHKRASYVC--PECNKEFVRRSHVTRHM 440
C +C LK+H+++ S+ C +C + R+ H+ RH+
Sbjct: 68 CQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHL 115
>At1g55390.1 68414.m06335 DC1 domain-containing protein similar to
hypothetical protein GI:4204272 from [Arabidopsis
thaliana] contains weak PHD zinc finger motifs contains
weak PHD zinc finger motifs DC1 domain, a divergent
protein kinase C domain of unknown function.
Length = 684
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +3
Query: 84 KQEVNSGRVYVCTMCKKSCDEDKWESHVEICRISSNIKVPTILLQRMWQE-V*VQKELLQ 260
+ E S +Y C +C+ D W + C I+ + V +L + M+ + + K +
Sbjct: 573 RDEDTSSGLYWCEICESELDPKTWFYTCDFCTIT--LHVNCLLGKDMYMKPQYIFKIGYR 630
Query: 261 H--VELNHSTLPNSVACTKCKVRCPNETVLK 347
H VE+ + + + CT+CK C + K
Sbjct: 631 HRKVEIARNDGNSRLFCTRCKRHCMQNLIYK 661
>At1g77300.1 68414.m09002 SET domain-containing protein similar to
huntingtin interacting protein 1 [Homo sapiens]
GI:12697196; contains Pfam profile PF00856: SET domain
Length = 1759
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 30 GSKNKKLKSSNTDQPIDIKQEVNSGRVYVCTMCKKSCDEDKWESHVEIC 176
G K+ + N ++ ID + N GR ++ C+ +C +KW + EIC
Sbjct: 1076 GQKHFYFMTLNGNEVIDAGAKGNLGR-FINHSCEPNCRTEKWMVNGEIC 1123
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 29.9 bits (64), Expect = 2.0
Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 1/119 (0%)
Frame = +3
Query: 111 YVCTMCKKSCDEDKWESHVEICRISSNIKVPTILLQRMWQEV*VQKELLQHVELNHSTLP 290
YVC +C + D+ ++++ R KVP LL+R ++ V+K + E P
Sbjct: 39 YVCEICNQGFQRDQ---NLQMHR--RRHKVPWKLLKRDKKDEEVRKRVYVCPE------P 87
Query: 291 NSVACTKCKVRCPNETVLKEHIETIHK-RASYVCPECNKEFVRRSHVTRHMTQSGCNGH 464
+ C + +K+H H +VC C+K + +S H+ G GH
Sbjct: 88 TCLHHDPCHA-LGDLVGIKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAHLKTCGSRGH 145
>At5g59820.1 68418.m07500 zinc finger (C2H2 type) family protein
(ZAT12) identical to zinc finger protein ZAT12
[Arabidopsis thaliana] gi|1418325|emb|CAA67232
Length = 162
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +3
Query: 327 PNETVLKEHIETIHKRASYVCPECNKEF----VRRSHVTRHMTQSGCNGHQL 470
PN L + K +S+ CP C EF H+ RH +SG G L
Sbjct: 64 PNNDALSSGLMKKVKTSSHPCPICGVEFPMGQALGGHMRRHRNESGAAGGAL 115
>At4g16920.1 68417.m02552 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1304
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -3
Query: 320 YFTFCASNTIR*CGVIQFYV 261
YF FC SN I+ CGV YV
Sbjct: 1196 YFKFCCSNRIKECGVRLLYV 1215
>At4g15230.1 68417.m02333 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, PDR5-like ABC transporter
[Spirodela polyrhiza] GI:1514643; contains Pfam profile
PF00005: ABC transporter
Length = 1326
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -3
Query: 515 YILDYLHTYFTRIQI*-LMTITATLCHMTSYMRTSYKFFVAFWAYIRSSFVYCLYVFLQN 339
Y++ L T R+ L +T T+ + + + +F WAY S + + + + +
Sbjct: 504 YLMGSLFTALFRLLADGLPELTLTISRLGVFCKQKDLYFYPAWAYAIPSIILKIPLSVLD 563
Query: 338 SFIWT 324
SFIWT
Sbjct: 564 SFIWT 568
>At2g47530.1 68415.m05932 hypothetical protein
Length = 184
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = +3
Query: 582 IPKSTMPYTLPIK----KKDGETLSREG*FEECNSGRRIYPI 695
+PK T YT P+K K ++ EG F C SG + YPI
Sbjct: 32 VPKPTTTYTSPVKTPYLPKSNPDIAIEG-FILCKSGYKTYPI 72
>At5g42280.1 68418.m05146 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 694
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +3
Query: 87 QEVNSGRVYVCTMCKKSCDEDKWESHVEICRISSNIKVPTILLQRMWQEV*VQKELLQ-- 260
++ SG+ Y C +C+ D KW E C I+ + V + + M+ + +L+
Sbjct: 580 EDTTSGQ-YWCEICESKLDASKWFYTCEFCSIT--LHVNCLQGKDMYMKPHYIFKLVSGR 636
Query: 261 -HVELNHSTLPNSVACTKCKVRCPNETVLKE 350
VE+ + C++C + C V K+
Sbjct: 637 YEVEIARNDGNTRPLCSQCNLLCAQTLVFKQ 667
>At4g15215.1 68417.m02332 ABC transporter family protein similar to
PDR5-like ABC transporter [Spirodela polyrhiza]
GI:1514643; contains Pfam profile PF00005: ABC
transporter
Length = 1390
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -3
Query: 467 LMTITATLCHMTSYMRTSYKFFVAFWAYIRSSFVYCLYVFLQNSFIWT 324
L +T T+ + + + +F WAY S + + + + +SFIWT
Sbjct: 551 LPELTLTISRLGVFCKQKDLYFYPAWAYAIPSIILRIPLSVLDSFIWT 598
>At4g01920.1 68417.m00255 DC1 domain-containing protein similar to
A. thaliana CHP-rich proteins
Length = 658
Score = 29.1 bits (62), Expect = 3.4
Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 1/112 (0%)
Frame = +3
Query: 66 DQPIDIKQEVNSGRVYVCTMCKKSCDEDKWESHVEICRISSNIKVPTILLQRMWQEV*VQ 245
D P+ + + Y C +C+K + W + + S + K L + + ++
Sbjct: 544 DHPLSLCYGEKASGKYWCDICEKETNPHTWFYTCKDHQASLHTKCVLGDLSSLMRRSTIK 603
Query: 246 KELLQH-VELNHSTLPNSVACTKCKVRCPNETVLKEHIETIHKRASYVCPEC 398
E + V LN+S + C+ CK+ C +LK T S C EC
Sbjct: 604 IEGTSYEVVLNNSI--SRPFCSWCKMHCIFPIILKTLGATNEYSCSLECAEC 653
>At4g01350.1 68417.m00175 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 652
Score = 29.1 bits (62), Expect = 3.4
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 8/114 (7%)
Frame = +3
Query: 42 KKLKSSNTDQPIDI--KQEVNSGRVYVCTMCKKSCDEDKWESHVEICRISSNIKVPT--- 206
KK+ N P+ + +++ + Y C +C+K D W C ++ + +
Sbjct: 526 KKIWHRNDGHPLTLCCEEKEEASDKYWCDICEKELDPSIWFYTCFDCGVTLHAQCVLGDF 585
Query: 207 ---ILLQRMWQEV*VQKELLQHVELNHSTLPNSVACTKCKVRCPNETVLKEHIE 359
+L Q W +K V N +T P C +C+ RC +LKE E
Sbjct: 586 SRLVLGQNYWFG---EKVKFGAVPNNRNTRP---LCIQCQSRCKVSVILKERNE 633
>At3g28650.1 68416.m03576 DC1 domain-containing protein similar to
hypothetical protein GI:4204272 from [Arabidopsis
thaliana] contains weak PHD zinc finger motifs contains
weak PHD zinc finger motifs DC1 domain, a divergent
protein kinase C domain of unknown function.
Length = 665
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/108 (20%), Positives = 43/108 (39%)
Frame = +3
Query: 66 DQPIDIKQEVNSGRVYVCTMCKKSCDEDKWESHVEICRISSNIKVPTILLQRMWQEV*VQ 245
D P+ + + Y C +C++ + W + C ++ + V +L + +
Sbjct: 541 DHPLTLCYGEKASGKYWCDICERETNSKTWFYTCKGCGVT--LHVFCVLGDIRYAKP--G 596
Query: 246 KELLQHVELNHSTLPNSVACTKCKVRCPNETVLKEHIETIHKRASYVC 389
+ +VEL + + C C CP +LK+ +E SY C
Sbjct: 597 GSINNNVELVPNNRSSRPLCHNCHCHCPGPFILKDFVEECF--CSYYC 642
>At2g02690.1 68415.m00208 hypothetical protein
Length = 623
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 264 VELNHSTLPNSVACTKCKVRCPNETVLK 347
V L + P+ C KCK+RCP T ++
Sbjct: 579 VFLQRNKSPSRPMCAKCKIRCPYPTYVE 606
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 342 LKEHIETIHKR-ASYVCPECNKEFVRRSHVTRHMTQSGCNGH 464
+K+H H +VC C+K + +S H+ G GH
Sbjct: 131 IKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGH 172
>At5g37500.1 68418.m04516 guard cell outward rectifying K+ channel
(GORK) identical to guard cell outward rectifying K+
channel [Arabidopsis thaliana] gi|11414742|emb|CAC17380;
member of the 1 pore, 6 transmembrane (1P/6TM) Shaker K+
channel family, PMID:11500563
Length = 820
Score = 28.7 bits (61), Expect = 4.5
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Frame = -3
Query: 689 IYPPPRIAF------FKLSFSG*CFPIFLFYRQCVWHCRLWY*ECCDLFRPAHWIEALRS 528
+Y P RIAF F + F G CFP L Y+ H + Y LFR +E +
Sbjct: 129 VYKPTRIAFRYLKSHFLMDFIG-CFPWDLIYKASGKHELVRYLLWIRLFRVRKVVEFFQR 187
Query: 527 FD*IYILDYLHTYFTRIQI*LMTITATLCHMTSYMRTS 414
+ ++YL T ++ + T T + Y+ T+
Sbjct: 188 LEKDTRINYLFTRILKLLFVEVYCTHTAACIFYYLATT 225
>At5g25630.1 68418.m03050 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 574
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/107 (20%), Positives = 44/107 (41%), Gaps = 6/107 (5%)
Frame = +3
Query: 3 KGKRVGRPPGSKNKKLKSSNTDQPIDIKQEVNSGRVYVCTMCKKSCDEDKWE--SHVEIC 176
KG + P ++ L + +D+ + + V V CKK E+ WE +E C
Sbjct: 158 KGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEEC 217
Query: 177 RISSNI----KVPTILLQRMWQEV*VQKELLQHVELNHSTLPNSVAC 305
+ + + T +Q+ + V + E+++ + + PN C
Sbjct: 218 GVRPDTVTYNTIATCYVQK-GETVRAESEVVEKMVMKEKAKPNGRTC 263
>At4g10370.1 68417.m01702 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 687
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 246 KELLQHVELNHSTLPNSVACTKCKVRCPNETVLKEH 353
KE + V++ ++ P CT+C RCP K H
Sbjct: 624 KESITDVQILLNSSPTRPICTRCLCRCPFPIFFKGH 659
>At4g02540.1 68417.m00347 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 822
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 303 CTKCKVRCPNETVLKEH 353
C +C+ RCP +TVLKE+
Sbjct: 792 CPRCERRCPYKTVLKEN 808
>At4g01930.1 68417.m00257 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 652
Score = 28.7 bits (61), Expect = 4.5
Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = +3
Query: 66 DQPIDIKQEVNSGRVYVCTMCKKSCDEDKWESHVEICRISSNIKVPTILLQRMWQEV*VQ 245
D P+ + + Y C +C+K + + W + + S +I+ L + +
Sbjct: 541 DHPLSLCYGEKASGKYWCDICEKETNPEIWFYTCKDYQASLHIECVVGALSLLMPRSTIN 600
Query: 246 K-ELLQHVELNHSTLPNSVACTKCKVRCPNETVLKEHIETIHKRASYVC 389
E V LN+S + C+ C++RC +LK + + SY C
Sbjct: 601 PWEKSYEVVLNNSA--SRPFCSYCELRCIFPIILKRLGSSDNYVCSYFC 647
>At1g74250.1 68414.m08599 DNAJ heat shock N-terminal
domain-containing protein contains Pfam domains PF00226:
DnaJ domain and PF00096: Zinc finger, C2H2 type
Length = 630
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 360 TIHKRASYVCPECNKEFVRRSHVTRHMTQSG 452
T K +S C C +EF R+ + +H+ SG
Sbjct: 593 TTKKNSSNECDRCGEEFESRTKLHKHLADSG 623
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 342 LKEHIETIHKR-ASYVCPECNKEFVRRSHVTRHMTQSGCNGH 464
+K+H H ++C C+K + +S H+ G GH
Sbjct: 134 IKKHFRRKHSNHKQWICERCSKGYAVQSDYKAHLKTCGTRGH 175
>At4g15233.1 68417.m02334 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, PDR5-like ABC transporter
[Spirodela polyrhiza] GI:1514643; contains Pfam profile
PF00005: ABC transporter
Length = 1168
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = -3
Query: 467 LMTITATLCHMTSYMRTSYKFFVAFWAYIRSSFVYCLYVFLQNSFIWT 324
L +T T+ + + + +F WAY S + + + SF+WT
Sbjct: 540 LPELTLTISRIAVFCKQKELYFYPAWAYAIPSAILKIPISFLESFLWT 587
>At4g19570.1 68417.m02877 DNAJ heat shock N-terminal
domain-containing protein low similarity to SP|Q9QYI4
DnaJ homolog subfamily B member 12 {Mus musculus};
contains Pfam profile PF00226: DnaJ domain
Length = 558
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 303 CTKCKVRCPNETVLKEHIETIHKRASYVCPECNKEFV 413
C++CK C + + H ++ CP C++EFV
Sbjct: 315 CSRCKTHC-------KLVRANHLNKTFPCPNCSQEFV 344
>At4g15236.1 68417.m02335 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1388
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = -3
Query: 467 LMTITATLCHMTSYMRTSYKFFVAFWAYIRSSFVYCLYVFLQNSFIWT 324
L +T T+ + + + +F WAY S + + + SF+WT
Sbjct: 556 LPELTLTVSRIAVFCKQKELYFYPAWAYAIPSAILKIPISFLESFLWT 603
>At4g13130.1 68417.m02045 DC1 domain-containing protein contains
Pfam protein PF03107 DC1 domain
Length = 767
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/89 (23%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Frame = +3
Query: 90 EVNSGRVYVCTMCKKSCD-EDKWESHVEICRISSNIKVPTILLQRMWQEV*VQKEL-LQH 263
E S +Y C C+K + E+++ E C ++ +I+ ++ + ++ + E +H
Sbjct: 645 EETSTMMYWCEACEKEINSEERFYKCDEYCCVTLHIQC--LIGKELYLKPGSSFEYDHRH 702
Query: 264 VELNHST-LPNSVACTKCKVRCPNETVLK 347
++ T + + C +CK RCP+ TV++
Sbjct: 703 ADVLLKTQVMSRPICFQCKSRCPHNTVIQ 731
>At4g01340.1 68417.m00174 CHP-rich zinc finger protein-related
similar to A. thaliana CHP-rich zinc finger proteins
Length = 226
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 273 NHSTLPNSVACTKCKVRCPNETVLKEHIE 359
NH+T P C +C+ RC +LK+H E
Sbjct: 88 NHNTRP---LCIQCQSRCKVSVILKKHNE 113
>At3g45840.1 68416.m04961 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 633
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/107 (19%), Positives = 40/107 (37%)
Frame = +3
Query: 42 KKLKSSNTDQPIDIKQEVNSGRVYVCTMCKKSCDEDKWESHVEICRISSNIKVPTILLQR 221
K LK P+ + + Y C +C+ D KW + C ++ +I R
Sbjct: 468 KTLKHKYDRHPLSLCYGEKASGKYCCDICETEMDPSKWFYTCDDCVVTFHIDCVFGDFSR 527
Query: 222 MWQEV*VQKELLQHVELNHSTLPNSVACTKCKVRCPNETVLKEHIET 362
+ + ++ E+ + C++C RC +LK +T
Sbjct: 528 FIAGS-IFETIIYTFEVVPTKDTTRQLCSQCHSRCKTPFILKALSQT 573
>At2g31760.1 68415.m03878 zinc finger protein-related contains low
similarity to zinc finger proteins and Pfam PF01485: IBR
domain
Length = 514
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 387 CPECNKEFVRRSHVTRHMTQSGCNGHQ 467
CP+C + + +SH HMT S GH+
Sbjct: 278 CPKCKRP-IEKSHGCNHMTCSASCGHR 303
>At1g55440.1 68414.m06341 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 653
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/91 (20%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Frame = +3
Query: 84 KQEVNSGRVYVCTMCKKSCDEDKWESHVEICRISSNIKVPTILLQRMWQEV*VQKEL--- 254
+++ SG+ Y C +C+ + D W + C I+ + + +L + M+ + E+
Sbjct: 542 EKDTTSGQ-YWCEICESELNADDWFYTCDSCMIT--LHIDCLLGKDMYMKPGHIFEIGDD 598
Query: 255 LQHVELNHSTLPNSVACTKCKVRCPNETVLK 347
VE+ H+ + + C++C + C K
Sbjct: 599 GDEVEIVHNDGNSRLICSECNLHCAQAWAFK 629
>At1g29180.1 68414.m03570 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 444
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 273 NHSTLPNSVACTKCKVRCPNETVL 344
NH + P+ CT C+ RCP +TVL
Sbjct: 408 NHMSRPS---CTGCRKRCPYKTVL 428
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,865,508
Number of Sequences: 28952
Number of extensions: 357252
Number of successful extensions: 1218
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1721869952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -