Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10407
         (711 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...   139   7e-35
EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.           28   0.33 
AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.        27   0.77 
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    25   3.1  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score =  139 bits (337), Expect = 7e-35
 Identities = 68/84 (80%), Positives = 74/84 (88%)
 Frame = +3

Query: 6   RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
           RQ G TLVNRTQGTKIAS+GLKGRVFEVSLADLQ + DAERSFRKF+L+AE V GR+VL 
Sbjct: 42  RQSGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLT 101

Query: 186 NFHGMDLTTDKLRWMVKKWQTLIK 257
           NFHGM LTTDKLR MV KWQTLI+
Sbjct: 102 NFHGMALTTDKLRSMVNKWQTLIE 125



 Score =  132 bits (318), Expect = 1e-32
 Identities = 57/85 (67%), Positives = 74/85 (87%)
 Frame = +2

Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
           + ++DVKTTDG++LRVFCIGFT KDS+SQRKTCYAQH+Q++ IR KM  II R++T+++L
Sbjct: 125 ECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDL 184

Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
           + VV KL+PDSIAKDIEKAC  +YP
Sbjct: 185 KGVVEKLLPDSIAKDIEKACQVVYP 209



 Score = 60.1 bits (139), Expect = 7e-11
 Identities = 33/61 (54%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
 Frame = +1

Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXDKSE------RPEGYEPPVQES 666
           PL DV IRKVKVLK+PRF++S LMELH             +       RPEGYEPPVQ S
Sbjct: 209 PLHDVYIRKVKVLKKPRFDLSSLMELHGDGGGKAAEVSTGAASGVVVVRPEGYEPPVQAS 268

Query: 667 V 669
           V
Sbjct: 269 V 269


>EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +3

Query: 87  VSLADLQADTDA-ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 248
           V+LA+L A +D  E    ++  I + +QG+ V      +DL+++KL +M  ++Q+
Sbjct: 181 VNLAELAASSDTLEHLNLQYNFIYD-IQGQVVFAKLKTLDLSSNKLAFMGPEFQS 234


>AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.
          Length = 286

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 16/55 (29%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +3

Query: 87  VSLADLQADTDA-ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 248
           V+LA+L A +D  E    ++  + + +QG+ V      +DL+++KL +M  ++Q+
Sbjct: 106 VNLAELAASSDTLEHLNLQYNFMYD-IQGQVVFAKLKTLDLSSNKLAFMGPEFQS 159


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 516 CLHPKGESVEEAPFRDLEVDGT 581
           C H  G ++E+A    LE DGT
Sbjct: 562 CSHDDGPALEKAQLYQLESDGT 583


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,028
Number of Sequences: 2352
Number of extensions: 15162
Number of successful extensions: 46
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)