Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10407
(711 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a pro... 130 5e-30
M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation effe... 130 5e-30
M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a pro... 130 5e-30
L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small su... 130 5e-30
BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A p... 130 5e-30
BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A p... 130 5e-30
BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A p... 130 5e-30
BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A p... 130 5e-30
BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A p... 130 5e-30
BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A p... 130 5e-30
BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A p... 130 5e-30
BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A p... 130 5e-30
BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A p... 130 5e-30
BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A p... 130 5e-30
BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A p... 130 5e-30
BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A p... 130 5e-30
AB007148-1|BAA25814.1| 57|Homo sapiens ribosomal protein S3a p... 62 2e-09
AF436845-1|AAL85274.1| 1101|Homo sapiens DNA helicase HEL308 pro... 30 7.1
>X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 130 bits (314), Expect = 5e-30
Identities = 59/85 (69%), Positives = 71/85 (83%)
Frame = +2
Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
+A++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L
Sbjct: 122 EAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDL 181
Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
+EVVNKLIPDSI KDIEKAC IYP
Sbjct: 182 KEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 122 bits (293), Expect = 2e-27
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L
Sbjct: 42 RNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLT 98
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIK 257
NFHGMDLT DK+ MVKKWQT+I+
Sbjct: 99 NFHGMDLTRDKMCSMVKKWQTMIE 122
Score = 65.3 bits (152), Expect = 2e-10
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Frame = +1
Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 669
PL DV +RKVK+LK+P+FE+ KLMELH D K ER +GYEPPVQESV
Sbjct: 206 PLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation
effector protein protein.
Length = 264
Score = 130 bits (314), Expect = 5e-30
Identities = 59/85 (69%), Positives = 71/85 (83%)
Frame = +2
Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
+A++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L
Sbjct: 122 EAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDL 181
Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
+EVVNKLIPDSI KDIEKAC IYP
Sbjct: 182 KEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 122 bits (293), Expect = 2e-27
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L
Sbjct: 42 RNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLT 98
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIK 257
NFHGMDLT DK+ MVKKWQT+I+
Sbjct: 99 NFHGMDLTRDKMCSMVKKWQTMIE 122
Score = 65.3 bits (152), Expect = 2e-10
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Frame = +1
Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 669
PL DV +RKVK+LK+P+FE+ KLMELH D K ER +GYEPPVQESV
Sbjct: 206 PLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 130 bits (314), Expect = 5e-30
Identities = 59/85 (69%), Positives = 71/85 (83%)
Frame = +2
Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
+A++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L
Sbjct: 122 EAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDL 181
Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
+EVVNKLIPDSI KDIEKAC IYP
Sbjct: 182 KEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 122 bits (293), Expect = 2e-27
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L
Sbjct: 42 RNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLT 98
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIK 257
NFHGMDLT DK+ MVKKWQT+I+
Sbjct: 99 NFHGMDLTRDKMCSMVKKWQTMIE 122
Score = 65.3 bits (152), Expect = 2e-10
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Frame = +1
Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 669
PL DV +RKVK+LK+P+FE+ KLMELH D K ER +GYEPPVQESV
Sbjct: 206 PLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small
subunit protein.
Length = 264
Score = 130 bits (314), Expect = 5e-30
Identities = 59/85 (69%), Positives = 71/85 (83%)
Frame = +2
Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
+A++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L
Sbjct: 122 EAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDL 181
Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
+EVVNKLIPDSI KDIEKAC IYP
Sbjct: 182 KEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 122 bits (293), Expect = 2e-27
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L
Sbjct: 42 RNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLT 98
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIK 257
NFHGMDLT DK+ MVKKWQT+I+
Sbjct: 99 NFHGMDLTRDKMCSMVKKWQTMIE 122
Score = 65.3 bits (152), Expect = 2e-10
Identities = 34/59 (57%), Positives = 40/59 (67%), Gaps = 4/59 (6%)
Frame = +1
Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 669
PL DV +RKVK+LK+P+FE+ KLMELH D K ER +GYEPPVQESV
Sbjct: 206 PLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSXKATGDETGAKVERADGYEPPVQESV 264
>BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 130 bits (314), Expect = 5e-30
Identities = 59/85 (69%), Positives = 71/85 (83%)
Frame = +2
Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
+A++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L
Sbjct: 122 EAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDL 181
Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
+EVVNKLIPDSI KDIEKAC IYP
Sbjct: 182 KEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 122 bits (293), Expect = 2e-27
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L
Sbjct: 42 RNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLT 98
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIK 257
NFHGMDLT DK+ MVKKWQT+I+
Sbjct: 99 NFHGMDLTRDKMCSMVKKWQTMIE 122
Score = 65.3 bits (152), Expect = 2e-10
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Frame = +1
Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 669
PL DV +RKVK+LK+P+FE+ KLMELH D K ER +GYEPPVQESV
Sbjct: 206 PLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 130 bits (314), Expect = 5e-30
Identities = 59/85 (69%), Positives = 71/85 (83%)
Frame = +2
Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
+A++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L
Sbjct: 122 EAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDL 181
Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
+EVVNKLIPDSI KDIEKAC IYP
Sbjct: 182 KEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 122 bits (293), Expect = 2e-27
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L
Sbjct: 42 RNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLT 98
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIK 257
NFHGMDLT DK+ MVKKWQT+I+
Sbjct: 99 NFHGMDLTRDKMCSMVKKWQTMIE 122
Score = 65.3 bits (152), Expect = 2e-10
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Frame = +1
Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 669
PL DV +RKVK+LK+P+FE+ KLMELH D K ER +GYEPPVQESV
Sbjct: 206 PLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 130 bits (314), Expect = 5e-30
Identities = 59/85 (69%), Positives = 71/85 (83%)
Frame = +2
Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
+A++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L
Sbjct: 122 EAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDL 181
Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
+EVVNKLIPDSI KDIEKAC IYP
Sbjct: 182 KEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 122 bits (293), Expect = 2e-27
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L
Sbjct: 42 RNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLT 98
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIK 257
NFHGMDLT DK+ MVKKWQT+I+
Sbjct: 99 NFHGMDLTRDKMCSMVKKWQTMIE 122
Score = 65.3 bits (152), Expect = 2e-10
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Frame = +1
Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 669
PL DV +RKVK+LK+P+FE+ KLMELH D K ER +GYEPPVQESV
Sbjct: 206 PLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 130 bits (314), Expect = 5e-30
Identities = 59/85 (69%), Positives = 71/85 (83%)
Frame = +2
Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
+A++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L
Sbjct: 122 EAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDL 181
Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
+EVVNKLIPDSI KDIEKAC IYP
Sbjct: 182 KEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 122 bits (293), Expect = 2e-27
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L
Sbjct: 42 RNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLT 98
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIK 257
NFHGMDLT DK+ MVKKWQT+I+
Sbjct: 99 NFHGMDLTRDKMCSMVKKWQTMIE 122
Score = 65.3 bits (152), Expect = 2e-10
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Frame = +1
Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 669
PL DV +RKVK+LK+P+FE+ KLMELH D K ER +GYEPPVQESV
Sbjct: 206 PLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 130 bits (314), Expect = 5e-30
Identities = 59/85 (69%), Positives = 71/85 (83%)
Frame = +2
Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
+A++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L
Sbjct: 122 EAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDL 181
Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
+EVVNKLIPDSI KDIEKAC IYP
Sbjct: 182 KEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 122 bits (293), Expect = 2e-27
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L
Sbjct: 42 RNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLT 98
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIK 257
NFHGMDLT DK+ MVKKWQT+I+
Sbjct: 99 NFHGMDLTRDKMCSMVKKWQTMIE 122
Score = 65.3 bits (152), Expect = 2e-10
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Frame = +1
Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 669
PL DV +RKVK+LK+P+FE+ KLMELH D K ER +GYEPPVQESV
Sbjct: 206 PLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 130 bits (314), Expect = 5e-30
Identities = 59/85 (69%), Positives = 71/85 (83%)
Frame = +2
Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
+A++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L
Sbjct: 122 EAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDL 181
Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
+EVVNKLIPDSI KDIEKAC IYP
Sbjct: 182 KEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 122 bits (293), Expect = 2e-27
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L
Sbjct: 42 RNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLT 98
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIK 257
NFHGMDLT DK+ MVKKWQT+I+
Sbjct: 99 NFHGMDLTRDKMCSMVKKWQTMIE 122
Score = 65.3 bits (152), Expect = 2e-10
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Frame = +1
Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 669
PL DV +RKVK+LK+P+FE+ KLMELH D K ER +GYEPPVQESV
Sbjct: 206 PLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 130 bits (314), Expect = 5e-30
Identities = 59/85 (69%), Positives = 71/85 (83%)
Frame = +2
Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
+A++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L
Sbjct: 122 EAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDL 181
Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
+EVVNKLIPDSI KDIEKAC IYP
Sbjct: 182 KEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 122 bits (293), Expect = 2e-27
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L
Sbjct: 42 RNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLT 98
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIK 257
NFHGMDLT DK+ MVKKWQT+I+
Sbjct: 99 NFHGMDLTRDKMCSMVKKWQTMIE 122
Score = 65.3 bits (152), Expect = 2e-10
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Frame = +1
Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 669
PL DV +RKVK+LK+P+FE+ KLMELH D K ER +GYEPPVQESV
Sbjct: 206 PLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 130 bits (314), Expect = 5e-30
Identities = 59/85 (69%), Positives = 71/85 (83%)
Frame = +2
Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
+A++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L
Sbjct: 122 EAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDL 181
Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
+EVVNKLIPDSI KDIEKAC IYP
Sbjct: 182 KEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 122 bits (293), Expect = 2e-27
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L
Sbjct: 42 RNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLT 98
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIK 257
NFHGMDLT DK+ MVKKWQT+I+
Sbjct: 99 NFHGMDLTRDKMCSMVKKWQTMIE 122
Score = 65.3 bits (152), Expect = 2e-10
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Frame = +1
Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 669
PL DV +RKVK+LK+P+FE+ KLMELH D K ER +GYEPPVQESV
Sbjct: 206 PLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 130 bits (314), Expect = 5e-30
Identities = 59/85 (69%), Positives = 71/85 (83%)
Frame = +2
Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
+A++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L
Sbjct: 122 EAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDL 181
Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
+EVVNKLIPDSI KDIEKAC IYP
Sbjct: 182 KEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 122 bits (293), Expect = 2e-27
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L
Sbjct: 42 RNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLT 98
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIK 257
NFHGMDLT DK+ MVKKWQT+I+
Sbjct: 99 NFHGMDLTRDKMCSMVKKWQTMIE 122
Score = 65.3 bits (152), Expect = 2e-10
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Frame = +1
Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 669
PL DV +RKVK+LK+P+FE+ KLMELH D K ER +GYEPPVQESV
Sbjct: 206 PLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 130 bits (314), Expect = 5e-30
Identities = 59/85 (69%), Positives = 71/85 (83%)
Frame = +2
Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
+A++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L
Sbjct: 122 EAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDL 181
Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
+EVVNKLIPDSI KDIEKAC IYP
Sbjct: 182 KEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 122 bits (293), Expect = 2e-27
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L
Sbjct: 42 RNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLT 98
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIK 257
NFHGMDLT DK+ MVKKWQT+I+
Sbjct: 99 NFHGMDLTRDKMCSMVKKWQTMIE 122
Score = 65.3 bits (152), Expect = 2e-10
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Frame = +1
Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 669
PL DV +RKVK+LK+P+FE+ KLMELH D K ER +GYEPPVQESV
Sbjct: 206 PLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 130 bits (314), Expect = 5e-30
Identities = 59/85 (69%), Positives = 71/85 (83%)
Frame = +2
Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
+A++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L
Sbjct: 122 EAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDL 181
Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
+EVVNKLIPDSI KDIEKAC IYP
Sbjct: 182 KEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 122 bits (293), Expect = 2e-27
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L
Sbjct: 42 RNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLT 98
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIK 257
NFHGMDLT DK+ MVKKWQT+I+
Sbjct: 99 NFHGMDLTRDKMCSMVKKWQTMIE 122
Score = 65.3 bits (152), Expect = 2e-10
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Frame = +1
Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 669
PL DV +RKVK+LK+P+FE+ KLMELH D K ER +GYEPPVQESV
Sbjct: 206 PLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 130 bits (314), Expect = 5e-30
Identities = 59/85 (69%), Positives = 71/85 (83%)
Frame = +2
Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
+A++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L
Sbjct: 122 EAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDL 181
Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
+EVVNKLIPDSI KDIEKAC IYP
Sbjct: 182 KEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 122 bits (293), Expect = 2e-27
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L
Sbjct: 42 RNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLT 98
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIK 257
NFHGMDLT DK+ MVKKWQT+I+
Sbjct: 99 NFHGMDLTRDKMCSMVKKWQTMIE 122
Score = 65.3 bits (152), Expect = 2e-10
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Frame = +1
Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 669
PL DV +RKVK+LK+P+FE+ KLMELH D K ER +GYEPPVQESV
Sbjct: 206 PLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>AB007148-1|BAA25814.1| 57|Homo sapiens ribosomal protein S3a
protein.
Length = 57
Score = 62.1 bits (144), Expect = 2e-09
Identities = 31/57 (54%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Frame = +1
Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQE 663
PL DV +RKVK+LK+P+FE+ KLMELH D K ER +GYEPPVQE
Sbjct: 1 PLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQE 57
>AF436845-1|AAL85274.1| 1101|Homo sapiens DNA helicase HEL308
protein.
Length = 1101
Score = 30.3 bits (65), Expect = 7.1
Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = +2
Query: 236 KMADSHQANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII--T 409
KM H + + Y VFC N +++++ + ++ K+ CE+I
Sbjct: 561 KMDPDHLVALVTEVIPNYSCLVFCPSKKNCENVAEMICKFLSKEYLKHKEKEKCEVIKNL 620
Query: 410 RDVTNSELREVVNKLIPDSIA 472
+++ N L V+ + IP +A
Sbjct: 621 KNIGNGNLCPVLKRTIPFGVA 641
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,235,015
Number of Sequences: 237096
Number of extensions: 2173033
Number of successful extensions: 5678
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5644
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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