Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10407
(711 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 144 1e-34
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 144 1e-34
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 144 1e-34
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 134 1e-31
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 120 2e-27
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 120 2e-27
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 144 bits (348), Expect = 1e-34
Identities = 70/84 (83%), Positives = 74/84 (88%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLC
Sbjct: 42 RQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLC 101
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIK 257
NFHGMDLTTDK R MVKKWQTLI+
Sbjct: 102 NFHGMDLTTDKYRSMVKKWQTLIE 125
Score = 87.8 bits (208), Expect = 1e-17
Identities = 42/89 (47%), Positives = 59/89 (66%)
Frame = +2
Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
+A ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L
Sbjct: 125 EAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADL 184
Query: 434 REVVNKLIPDSIAKDIEKACHGIYPCAMF 520
++++ + K +KA MF
Sbjct: 185 KQLLTSWPWTRLRKISKKAVSAYIHYMMF 213
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 144 bits (348), Expect = 1e-34
Identities = 70/84 (83%), Positives = 74/84 (88%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLC
Sbjct: 42 RQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLC 101
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIK 257
NFHGMDLTTDK R MVKKWQTLI+
Sbjct: 102 NFHGMDLTTDKYRSMVKKWQTLIE 125
Score = 120 bits (289), Expect = 2e-27
Identities = 54/85 (63%), Positives = 69/85 (81%)
Frame = +2
Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
+A ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L
Sbjct: 125 EAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADL 184
Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
+++VNKL DSIAKDIEK+C IYP
Sbjct: 185 KQLVNKLALDSIAKDIEKSCQRIYP 209
Score = 66.9 bits (156), Expect = 3e-11
Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 5/60 (8%)
Frame = +1
Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXDKSE-----RPEGYEPPVQESV 669
PL DV IRKVKVLK+PRF++SKL+ELH SE RPEGYEPPVQE+V
Sbjct: 209 PLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEAV 268
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 144 bits (348), Expect = 1e-34
Identities = 70/84 (83%), Positives = 74/84 (88%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLC
Sbjct: 42 RQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLC 101
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIK 257
NFHGMDLTTDK R MVKKWQTLI+
Sbjct: 102 NFHGMDLTTDKYRSMVKKWQTLIE 125
Score = 120 bits (289), Expect = 2e-27
Identities = 54/85 (63%), Positives = 69/85 (81%)
Frame = +2
Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
+A ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L
Sbjct: 125 EAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADL 184
Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
+++VNKL DSIAKDIEK+C IYP
Sbjct: 185 KQLVNKLALDSIAKDIEKSCQRIYP 209
Score = 66.9 bits (156), Expect = 3e-11
Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 5/60 (8%)
Frame = +1
Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXDKSE-----RPEGYEPPVQESV 669
PL DV IRKVKVLK+PRF++SKL+ELH SE RPEGYEPPVQE+V
Sbjct: 209 PLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEAV 268
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 134 bits (324), Expect = 1e-31
Identities = 67/85 (78%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLA-DLQADTDAERSFRKFRLIAEYVQGRNVL 182
RQ+G TLVNRTQG +IAS+ KGRVFEVSL DLQ D D E SFRKFRLIAE VQ RNVL
Sbjct: 42 RQIGKTLVNRTQGQRIASDYFKGRVFEVSLVPDLQKDIDPEHSFRKFRLIAEDVQDRNVL 101
Query: 183 CNFHGMDLTTDKLRWMVKKWQTLIK 257
CNFHGMDLTTDK R MVKKWQTLI+
Sbjct: 102 CNFHGMDLTTDKYRSMVKKWQTLIE 126
Score = 114 bits (274), Expect = 1e-25
Identities = 53/86 (61%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRK-KMCEIITRDVTNSE 430
+A ++ KT DGY+LRVFCIGFT KD SQRKTCYA +QVR IR +M +IIT +V+ ++
Sbjct: 126 EAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAHESQVRKIRSGRMTDIITNEVSGAD 185
Query: 431 LREVVNKLIPDSIAKDIEKACHGIYP 508
L+++VNKL DSIAKDIEK+C IYP
Sbjct: 186 LKQLVNKLALDSIAKDIEKSCQRIYP 211
Score = 53.2 bits (122), Expect = 3e-07
Identities = 31/60 (51%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Frame = +1
Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXDKSE-RPEG----YEPPVQESV 669
PL DV IRKVKVLK+PRF++SKL+ELH SE P+ +PPVQESV
Sbjct: 211 PLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAPKSTALKVKPPVQESV 270
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 120 bits (289), Expect = 2e-27
Identities = 54/85 (63%), Positives = 69/85 (81%)
Frame = +2
Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
+A ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L
Sbjct: 20 EAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADL 79
Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
+++VNKL DSIAKDIEK+C IYP
Sbjct: 80 KQLVNKLALDSIAKDIEKSCQRIYP 104
Score = 66.9 bits (156), Expect = 3e-11
Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 5/60 (8%)
Frame = +1
Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXDKSE-----RPEGYEPPVQESV 669
PL DV IRKVKVLK+PRF++SKL+ELH SE RPEGYEPPVQE+V
Sbjct: 104 PLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEAV 163
Score = 38.7 bits (86), Expect = 0.008
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 198 MDLTTDKLRWMVKKWQTLIK 257
MDLTTDK R MVKKWQTLI+
Sbjct: 1 MDLTTDKYRSMVKKWQTLIE 20
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 120 bits (289), Expect = 2e-27
Identities = 54/85 (63%), Positives = 69/85 (81%)
Frame = +2
Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
+A ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L
Sbjct: 75 EAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADL 134
Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
+++VNKL DSIAKDIEK+C IYP
Sbjct: 135 KQLVNKLALDSIAKDIEKSCQRIYP 159
Score = 112 bits (269), Expect = 5e-25
Identities = 54/62 (87%), Positives = 55/62 (88%)
Frame = +3
Query: 72 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 251
GRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTL
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTL 73
Query: 252 IK 257
I+
Sbjct: 74 IE 75
Score = 66.9 bits (156), Expect = 3e-11
Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 5/60 (8%)
Frame = +1
Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXDKSE-----RPEGYEPPVQESV 669
PL DV IRKVKVLK+PRF++SKL+ELH SE RPEGYEPPVQE+V
Sbjct: 159 PLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEAV 218
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,129,445
Number of Sequences: 53049
Number of extensions: 670058
Number of successful extensions: 2039
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2033
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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