Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10405
(814 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 158 2e-37
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 130 5e-29
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 125 2e-27
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 112 1e-23
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 100 4e-20
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 100 9e-20
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 99 1e-19
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 94 3e-18
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 93 1e-17
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 90 5e-17
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 88 3e-16
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 86 9e-16
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 86 1e-15
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 81 4e-14
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 79 1e-13
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 76 9e-13
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 76 1e-12
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 74 4e-12
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 74 5e-12
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 68 3e-10
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 66 1e-09
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 65 2e-09
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 63 9e-09
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 62 1e-08
UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal ... 62 2e-08
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 59 1e-07
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 59 2e-07
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 58 3e-07
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 56 8e-07
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 54 3e-06
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 54 4e-06
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 44 0.005
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 39 0.17
UniRef50_Q23TC4 Cluster: Putative uncharacterized protein; n=1; ... 35 2.8
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 34 4.9
UniRef50_UPI00005E1AE6 Cluster: putative non-structural protein ... 33 6.5
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 33 6.5
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 158 bits (383), Expect = 2e-37
Identities = 74/94 (78%), Positives = 85/94 (90%)
Frame = +3
Query: 255 RLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNP 434
RLD +FGSWKTPSK+KKNFNLPQPKMANTDL+RLLKS+EIR+VLRAP KRV+RATRKLNP
Sbjct: 124 RLDAIFGSWKTPSKEKKNFNLPQPKMANTDLSRLLKSEEIRRVLRAPIKRVVRATRKLNP 183
Query: 435 LTNNKAMLKLNPYAAVLKRKAILELAEGRT*RLL 536
LTN KAMLKLNPYAAVLK+KA+L+ + + R L
Sbjct: 184 LTNTKAMLKLNPYAAVLKKKAVLDQVKRKNKRAL 217
Score = 144 bits (349), Expect = 2e-33
Identities = 70/125 (56%), Positives = 86/125 (68%)
Frame = +1
Query: 1 LKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXX 180
+KAWSD+LKVYKSQRLRAGKGKMRNRRR+ RKGPLII+NKDQGLTR+FRNIPGV+
Sbjct: 39 IKAWSDVLKVYKSQRLRAGKGKMRNRRRLHRKGPLIIYNKDQGLTRSFRNIPGVDMVNVN 98
Query: 181 XXXXXXXAPGGHLGRFVIWTQSAFGGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSHVFS 360
APGGH+GRF+IWTQSAF L G + +++ P P + + S
Sbjct: 99 KLNLLHLAPGGHVGRFMIWTQSAFERLDAIFGSWKTPSKEKKNFNLPQ---PKMANTDLS 155
Query: 361 SLMRS 375
L++S
Sbjct: 156 RLLKS 160
Score = 33.5 bits (73), Expect = 6.5
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +2
Query: 545 EKSGLKLSKRNPAMKAEKLRERRRKNI 625
EK G+KL +PA+KA KL+E+R K+I
Sbjct: 221 EKRGIKLPDDDPAVKALKLKEKRAKSI 247
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 130 bits (313), Expect = 5e-29
Identities = 63/90 (70%), Positives = 74/90 (82%)
Frame = +3
Query: 255 RLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNP 434
RL+ LFG+WK PS KK +NLPQPKMANTDL+RLLKS+EIRKVLR P KRV R+ R+LNP
Sbjct: 262 RLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNP 321
Query: 435 LTNNKAMLKLNPYAAVLKRKAILELAEGRT 524
LTN + ++KLNPYA VLKR+A L AE RT
Sbjct: 322 LTNVRQLIKLNPYAEVLKRRAAL-AAEKRT 350
Score = 125 bits (302), Expect = 1e-27
Identities = 60/125 (48%), Positives = 80/125 (64%)
Frame = +1
Query: 1 LKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXX 180
LK W+DI KVYKSQR RAG+G MR+RRRI R+GPL++++KD+GL +AFRNIPG+E
Sbjct: 177 LKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVD 236
Query: 181 XXXXXXXAPGGHLGRFVIWTQSAFGGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSHVFS 360
APGGH+GRFVIWT+SAF L G + ++ P P + + S
Sbjct: 237 KLNLLKLAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQ---PKMANTDLS 293
Query: 361 SLMRS 375
L++S
Sbjct: 294 RLLKS 298
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 125 bits (301), Expect = 2e-27
Identities = 58/95 (61%), Positives = 68/95 (71%)
Frame = +1
Query: 1 LKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXX 180
LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 174 LKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVS 233
Query: 181 XXXXXXXAPGGHLGRFVIWTQSAFGGLTPYSGHGR 285
APGGH+GRF IWT+SAF L G R
Sbjct: 234 KLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 268
Score = 102 bits (244), Expect = 1e-20
Identities = 47/94 (50%), Positives = 63/94 (67%)
Frame = +3
Query: 252 RRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 431
R+LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 432 PLTNNKAMLKLNPYAAVLKRKAILELAEGRT*RL 533
PL N + MLKLNPYA ++R IL A R+
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRV 351
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 112 bits (269), Expect = 1e-23
Identities = 51/92 (55%), Positives = 67/92 (72%)
Frame = +1
Query: 1 LKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXX 180
L A++DI KV S+ +R+GKGKMRNRR +QR+GPL+++++D G+TRAFRNIPGVE
Sbjct: 177 LGAYADIEKVKASRNVRSGKGKMRNRRYVQRRGPLVVYSEDNGVTRAFRNIPGVELCSVD 236
Query: 181 XXXXXXXAPGGHLGRFVIWTQSAFGGLTPYSG 276
APGGH+GRF+IWT+SAF L G
Sbjct: 237 RLGLLTLAPGGHVGRFIIWTKSAFEKLDSIFG 268
Score = 72.1 bits (169), Expect = 2e-11
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Frame = +3
Query: 255 RLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIR--ATRKL 428
+LD +FG+ + S KK + P MA TDLTRL+ SDEI+ L AP IR A K
Sbjct: 262 KLDSIFGTSTSKSASKKGWKPPTNIMAQTDLTRLINSDEIQSALNAPKLGAIRAHAPLKR 321
Query: 429 NPLTNNKAMLKLNPYAAVLK 488
NPL N AM KLNPYA V +
Sbjct: 322 NPLKNKSAMDKLNPYAKVAR 341
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 100 bits (240), Expect = 4e-20
Identities = 49/93 (52%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Frame = +1
Query: 7 AWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG---LTRAFRNIPGVEXXXX 177
A +D K S++LRAGKGK+R RR QR+GPL+I+N D+ L +AFRNIPGVE
Sbjct: 155 AGADCEKAKNSRKLRAGKGKLRGRRHKQRRGPLVIYNPDEDGKELVKAFRNIPGVETSSV 214
Query: 178 XXXXXXXXAPGGHLGRFVIWTQSAFGGLTPYSG 276
APGGHLGRF++WT SAFG L G
Sbjct: 215 YSMNLLQLAPGGHLGRFIVWTSSAFGALDTIYG 247
Score = 63.3 bits (147), Expect = 7e-09
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Frame = +3
Query: 258 LDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLR-----APNKRVIRATR 422
LD ++GS PS KK+F LP M DL++++ S +I+KVLR A +KR + +
Sbjct: 242 LDTIYGSTTEPSALKKDFLLPSTMMKQPDLSKIINSSDIQKVLRPVRGGAVSKRGV--VQ 299
Query: 423 KLNPLTNNKAMLKLNPYAAVLKRKAI 500
K NPL N + L+LNPYAA ++ +
Sbjct: 300 KKNPLKNFQVQLRLNPYAATFSKEKL 325
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 99.5 bits (237), Expect = 9e-20
Identities = 51/111 (45%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
Frame = +1
Query: 7 AWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG-LTRAFRNIPGVEXXXXXX 183
A+ D K S + GKGKMRNRR I RKGPLI++ + L +AFRNIPGVE
Sbjct: 39 AYLDTEKAKDSHAIHPGKGKMRNRRYISRKGPLIVYGMEGAKLVKAFRNIPGVEVANVDR 98
Query: 184 XXXXXXAPGGHLGRFVIWTQSAFGGL-TPYSGHGRHHQNKRRTSTCPNRRW 333
APGGHLGRFVIWT+S+F L + Y + + +R + CP ++W
Sbjct: 99 LNLLKLAPGGHLGRFVIWTKSSFEKLDSIYRSFEKKLRRRRMGTCCPVKKW 149
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 99.1 bits (236), Expect = 1e-19
Identities = 51/111 (45%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Frame = +3
Query: 204 SGRPSWT-FRHLDSVRIRRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRK 380
S RPS T L + +LD L+G+W + K N+NLP KM NTDL+R+LKS EI++
Sbjct: 80 SSRPSETSLELLYLIAFCKLDDLYGTWHKAASLKSNYNLPMHKMLNTDLSRILKSPEIQR 139
Query: 381 VLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELAEGRT*RL 533
L+AP K++ R K NPL N MLKLNPYA ++R IL A+ R+
Sbjct: 140 ALQAPRKKIHRRVLKKNPLKNLGIMLKLNPYAKTMRRNTILRQAKNHKLRM 190
Score = 48.8 bits (111), Expect = 2e-04
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +1
Query: 1 LKAWSDILKVYKSQRLRAGKGKMRN 75
LKAW+DI KVY SQR+RAGKGKMRN
Sbjct: 37 LKAWNDIKKVYASQRMRAGKGKMRN 61
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 94.3 bits (224), Expect = 3e-18
Identities = 45/93 (48%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Frame = +1
Query: 1 LKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIF-NKDQGLTRAFRNIPGVEXXXX 177
+ A+SD+LKV S+ +RAG+GKMR R+ +RKGPL+++ N D +AFRNIPGV+
Sbjct: 175 INAYSDVLKVIASKTVRAGQGKMRGRKIKERKGPLVVYGNDDLQAVKAFRNIPGVDTCRV 234
Query: 178 XXXXXXXXAPGGHLGRFVIWTQSAFGGLTPYSG 276
APG H+GRF+IWT+SAF L G
Sbjct: 235 ENLSVLNLAPGCHIGRFIIWTESAFKKLNTIFG 267
Score = 54.4 bits (125), Expect = 3e-06
Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +3
Query: 252 RRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVI-RATRKL 428
++L+ +FG+ K ++ K F + +MA D+ R++ + E K+LRA K V+ + ++
Sbjct: 260 KKLNTIFGTQKKMAQGKSGFRIAHAQMAVPDMKRVVVAAEKAKLLRA--KIVLPKVPKRA 317
Query: 429 NPLTNNKAMLKLNPYAAVLKRK 494
NPL N AM+KLNPYA + K
Sbjct: 318 NPLKNWAAMVKLNPYAKIASHK 339
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 92.7 bits (220), Expect = 1e-17
Identities = 45/88 (51%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Frame = +1
Query: 7 AWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFN---KDQGLTRAFRNIPGVEXXXX 177
A D+ KV S++LRAGKGK+R RR QR+GPL++++ + L RAFRN+PGVE
Sbjct: 178 ALKDVEKVKDSRKLRAGKGKLRGRRHRQRRGPLVVYDGATDGKELVRAFRNLPGVETCDV 237
Query: 178 XXXXXXXXAPGGHLGRFVIWTQSAFGGL 261
APGGHLGRF+IW+ SAF L
Sbjct: 238 YSLNLLQLAPGGHLGRFIIWSSSAFKAL 265
Score = 62.9 bits (146), Expect = 9e-09
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Frame = +3
Query: 240 SVRIRRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVI--R 413
S + LD ++G+ PS KK+F LP ++ D+ RL+ S E++ V+RA + R
Sbjct: 259 SSAFKALDNIYGTTTAPSALKKDFLLPSNVVSQADIGRLINSSELQSVIRAAKGSALTKR 318
Query: 414 A-TRKLNPLTNNKAMLKLNPYAAVLKRKAI 500
A +K NPL N + +L+LNPYAA ++ I
Sbjct: 319 AGVQKKNPLLNKQVLLRLNPYAAGYSKEKI 348
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 90.2 bits (214), Expect = 5e-17
Identities = 44/92 (47%), Positives = 58/92 (63%)
Frame = +1
Query: 1 LKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXX 180
LKA D+ +S+R+R G GK RNRR QR+G LI+ ++++GL AFRNI GV+
Sbjct: 174 LKASDDVKHSAESKRIRVGSGKARNRRYTQRRGVLIVHDQNEGLANAFRNISGVDISNVX 233
Query: 181 XXXXXXXAPGGHLGRFVIWTQSAFGGLTPYSG 276
APGGHLGRF+IWT+ A+ L G
Sbjct: 234 RLNIRDLAPGGHLGRFIIWTEGAYKKLDKLYG 265
Score = 43.6 bits (98), Expect = 0.006
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Frame = +3
Query: 252 RRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRA---PNKRVIRATR 422
++LD L+G+ + K + P P + NTDL+R++ S ++ VL+A +K++I R
Sbjct: 258 KKLDKLYGTRFRTALLKNEYKHPTPSVTNTDLSRIIHSPTVQSVLKARGKQSKKIINVRR 317
Query: 423 KL---NPLTNNKAMLK 461
L + L+ N A +K
Sbjct: 318 NLLIASKLSQNNARIK 333
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 87.8 bits (208), Expect = 3e-16
Identities = 44/95 (46%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Frame = +1
Query: 7 AWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FNKDQGLTRAFRNIPGVEXXXXXX 183
A+ D+ KV ++ +RAG K R ++ RKGPL++ FN++ L +AFRN+PGVE
Sbjct: 23 AFEDVQKVVSTKTIRAGVSKSRGKKYRVRKGPLVVYFNENAKLLKAFRNVPGVEVVNVTR 82
Query: 184 XXXXXXAPGGHLGRFVIWTQSAFGGLTPYSGHGRH 288
APGG LGRFVIWTQSAF L G R+
Sbjct: 83 LNLLQLAPGGQLGRFVIWTQSAFANLDKLFGTYRY 117
Score = 61.3 bits (142), Expect = 3e-08
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = +3
Query: 258 LDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR-KVLRAPNKRVIRATRKLNP 434
LD LFG+++ S K + L +P + N DL R++ S++++ KV A V+ +K NP
Sbjct: 108 LDKLFGTYRYSSILKDGYQLLRPLLTNPDLARIINSNQVQEKVQAAKQTTVLHEVQKKNP 167
Query: 435 LTNNKAMLKLNPYA 476
L N+KA+ +LNPYA
Sbjct: 168 LKNSKALDRLNPYA 181
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 86.2 bits (204), Expect = 9e-16
Identities = 39/82 (47%), Positives = 53/82 (64%)
Frame = +1
Query: 16 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXX 195
D+ + S+ +RAG+GKMRNRR I RKGPL+I+N + + R FRN+PGV+
Sbjct: 167 DVERCKDSRHIRAGRGKMRNRRYITRKGPLVIYNTED-VARGFRNLPGVDLCHVSSIRLL 225
Query: 196 XXAPGGHLGRFVIWTQSAFGGL 261
APG H GR ++WT+SAF L
Sbjct: 226 ELAPGSHPGRLILWTKSAFASL 247
Score = 45.6 bits (103), Expect = 0.002
Identities = 19/64 (29%), Positives = 40/64 (62%)
Frame = +3
Query: 300 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAA 479
K+N+ LP+ + TD+ R+L+SD ++K P + + RK++P ++ +A+ +L+P
Sbjct: 254 KQNYTLPRSCITQTDIERILQSDAVQKTF-VPKRDPLVIERKVDPFSSKEALARLDPSGT 312
Query: 480 VLKR 491
V+ +
Sbjct: 313 VMPK 316
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 85.8 bits (203), Expect = 1e-15
Identities = 44/95 (46%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Frame = +1
Query: 7 AWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FNKDQGLTRAFRNIPGVEXXXXXX 183
A+ D+ KV ++ +RAG K R ++ RKGPL++ FN++ L +AFRN+PGVE
Sbjct: 177 AFEDVQKVVSTKVVRAGISKQRGKKYRVRKGPLVVYFNENAKLLKAFRNVPGVEVVNVTR 236
Query: 184 XXXXXXAPGGHLGRFVIWTQSAFGGLTPYSGHGRH 288
APGG LGRFVIWTQSAF L G R+
Sbjct: 237 LNLLQLAPGGQLGRFVIWTQSAFAHLDKLFGTYRY 271
Score = 63.7 bits (148), Expect = 5e-09
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +3
Query: 258 LDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR-KVLRAPNKRVIRATRKLNP 434
LD LFG+++ S K + L +P + N DL R++ S++++ KV A +V+ +K NP
Sbjct: 262 LDKLFGTYRYASVLKDGYQLLRPLLTNPDLARIINSNQVQEKVQPAKTTKVLHDVQKKNP 321
Query: 435 LTNNKAMLKLNPYAAVLKRKAI 500
L N KAM +LNPYA + A+
Sbjct: 322 LKNTKAMDRLNPYAKKQRAAAV 343
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 80.6 bits (190), Expect = 4e-14
Identities = 38/73 (52%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +3
Query: 255 RLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV-IRATRKLN 431
+LD L+G+W + K N+NLP KM NTDL+R+LK I++ LRAP KR+ R +K N
Sbjct: 176 KLDDLYGTWPKAASLKSNYNLPMHKMLNTDLSRILKRPGIQRALRAPRKRIHRRVLKKKN 235
Query: 432 PLTNNKAMLKLNP 470
PL N + MLKLNP
Sbjct: 236 PLKNLRLMLKLNP 248
Score = 74.9 bits (176), Expect = 2e-12
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +1
Query: 1 LKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRA 141
LKAW+DI KVY SQR+RAGKGKMRNRR IQR+G II+N+D G+ +A
Sbjct: 115 LKAWNDIKKVYASQRMRAGKGKMRNRRPIQRRGSCIIYNEDNGIIKA 161
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 79.0 bits (186), Expect = 1e-13
Identities = 36/79 (45%), Positives = 50/79 (63%)
Frame = +1
Query: 16 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXX 195
++ ++ KS +LRA GKMRNR+ GPLII++ D G+ +AFRNIPGV+
Sbjct: 179 EVNRLIKSXKLRARXGKMRNRKYKISNGPLIIYSXDSGIKKAFRNIPGVDLCNVTKLNLL 238
Query: 196 XXAPGGHLGRFVIWTQSAF 252
APGG +GR IW++ AF
Sbjct: 239 KLAPGGSIGRLCIWSEDAF 257
Score = 50.0 bits (114), Expect = 7e-05
Identities = 25/86 (29%), Positives = 46/86 (53%)
Frame = +3
Query: 252 RRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 431
++LD ++G KKN+ LP+P + N D+ R++ SD+++ L + T+ N
Sbjct: 258 KKLDVIYGKTFQKYVTKKNYILPKPIVNNADIYRIINSDQVQASLLDKKSPCKKRTQNKN 317
Query: 432 PLTNNKAMLKLNPYAAVLKRKAILEL 509
LTN +LNP +L+ A+ ++
Sbjct: 318 SLTNFAVRCRLNPAYKLLRALAVRKM 343
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 76.2 bits (179), Expect = 9e-13
Identities = 34/84 (40%), Positives = 48/84 (57%)
Frame = +1
Query: 10 WSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXX 189
+ D+ +V R+ KGK R +KGPL+I+N+D+G+ +AFRNIPGVE
Sbjct: 174 YGDVQRVLDGSVHRSSKGKFRRAAYKTKKGPLVIYNEDKGIVKAFRNIPGVETISVKALA 233
Query: 190 XXXXAPGGHLGRFVIWTQSAFGGL 261
AP +GR +WT+SAF L
Sbjct: 234 LAKLAPAAQVGRLTVWTESAFKAL 257
Score = 34.3 bits (75), Expect = 3.7
Identities = 25/76 (32%), Positives = 39/76 (51%)
Frame = +3
Query: 294 KQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPY 473
+ KK F+LP+ M N D+ ++ SD ++ VL K V+ PL + KL+
Sbjct: 262 ESKKRFSLPRSIMTNADIEAVITSDAVQSVLN-EKKEVV-------PLPKCRCCKKLSVG 313
Query: 474 AAVLKRKAILELAEGR 521
A +KA+ E+AE R
Sbjct: 314 ACEDWQKALKEVAELR 329
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 75.8 bits (178), Expect = 1e-12
Identities = 40/120 (33%), Positives = 62/120 (51%)
Frame = +1
Query: 16 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXX 195
++ ++ S +R GKGKMRNRRR+ GPL+++ +D G+ +A RNI GV+
Sbjct: 182 EMKRIESSIAIRCGKGKMRNRRRVCAVGPLVVYAEDNGIVKAMRNIKGVDTCSVERLNLL 241
Query: 196 XXAPGGHLGRFVIWTQSAFGGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSHVFSSLMRS 375
APGG GR I+T+ A L G H + + T P P +T+ + ++ S
Sbjct: 242 RLAPGGTFGRLTIFTKGAIKRLQEIYGSYTHGSSSKVGYTLPR---PAMTNADITRIINS 298
Score = 54.0 bits (124), Expect = 4e-06
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Frame = +3
Query: 249 IRRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPN-----KRVIR 413
I+RL ++GS+ S K + LP+P M N D+TR++ S E++ VLR + R
Sbjct: 260 IKRLQEIYGSYTHGSSSKVGYTLPRPAMTNADITRIINSTEVQSVLRPLRGFRCMGSMGR 319
Query: 414 ATRKLNPLTNNKAMLKLNPYAAVLKRKAILELAEG 518
+ K N LTN LNP L++ A L G
Sbjct: 320 SKTKKNNLTNLTKRACLNPAYTSLRKSARLAQIPG 354
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 74.1 bits (174), Expect = 4e-12
Identities = 31/80 (38%), Positives = 50/80 (62%)
Frame = +1
Query: 10 WSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXX 189
++D+ + + +R RAG+GKMR RR +++K L++ KD G+ +A +N+PGV+
Sbjct: 164 YADVERAKERKRYRAGRGKMRGRRYVKKKSVLLVVGKDDGVVKAAKNLPGVDAVVVKDLN 223
Query: 190 XXXXAPGGHLGRFVIWTQSA 249
APG H GR +WT+SA
Sbjct: 224 VELLAPGCHPGRLTVWTKSA 243
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 73.7 bits (173), Expect = 5e-12
Identities = 43/109 (39%), Positives = 54/109 (49%)
Frame = +1
Query: 1 LKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXX 180
L ++ +V KS+ +R GKGKMRNRR QRKG LI+ + + FRNI GV+
Sbjct: 171 LNMTEELKRVEKSRGVRCGKGKMRNRRYTQRKGILIVHGESSEML-GFRNIRGVDQMSID 229
Query: 181 XXXXXXXAPGGHLGRFVIWTQSAFGGLTPYSGHGRHHQNKRRTSTCPNR 327
APGG GR +IWT+SAF L G PNR
Sbjct: 230 SLDLLELAPGGVAGRLIIWTESAFEKLDKIFGGVEREAELTPGFKLPNR 278
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 67.7 bits (158), Expect = 3e-10
Identities = 30/80 (37%), Positives = 46/80 (57%)
Frame = +1
Query: 10 WSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXX 189
W+D+ + ++R+RAGKGK R RR ++ K LI+ ++D+G+ RN PGV+
Sbjct: 171 WADVERAKSNRRIRAGKGKRRGRRYVKPKSVLIVVDEDEGIKLGARNHPGVDVVEAMHLG 230
Query: 190 XXXXAPGGHLGRFVIWTQSA 249
APG H GR ++T A
Sbjct: 231 VEHLAPGAHPGRLTVFTPGA 250
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 66.1 bits (154), Expect = 1e-09
Identities = 31/83 (37%), Positives = 46/83 (55%)
Frame = +1
Query: 13 SDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXX 192
+D+ + + +RAGKG MR R+ K L++ ++ GL +A RNIPGV+
Sbjct: 221 ADLDRARTGRTIRAGKGTMRGRKYRTPKSILLVVSQTNGLAKAARNIPGVDIVVAKDLSA 280
Query: 193 XXXAPGGHLGRFVIWTQSAFGGL 261
APGG GR +WT++A G L
Sbjct: 281 EDLAPGGDAGRLTVWTKAAIGAL 303
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/78 (37%), Positives = 46/78 (58%)
Frame = +1
Query: 16 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXX 195
DI++ K +++++GKGK+R R+ KGPL++ D+G++ RN GV+
Sbjct: 169 DIVRAKKGRKIKSGKGKLRGRKYRTPKGPLVVVGNDRGISLGARNHAGVDVVEVNNINAE 228
Query: 196 XXAPGGHLGRFVIWTQSA 249
APG H GR I+T+SA
Sbjct: 229 LLAPGTHAGRLTIYTKSA 246
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 62.9 bits (146), Expect = 9e-09
Identities = 32/87 (36%), Positives = 48/87 (55%)
Frame = +1
Query: 13 SDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXX 192
+ I++ ++L++GKGKMRNRR + GPL++F + ++ RNI ++
Sbjct: 172 NSIVRNKLKRKLKSGKGKMRNRRFKKPTGPLLVFKNN---LKSLRNIANIDCMKISALNL 228
Query: 193 XXXAPGGHLGRFVIWTQSAFGGLTPYS 273
APGGHLGR IW+ AF L S
Sbjct: 229 TKLAPGGHLGRLCIWSSKAFQMLNTIS 255
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/71 (42%), Positives = 45/71 (63%)
Frame = +1
Query: 1 LKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXX 180
+ A D+ +V S+ +RAG+GKMRNRR + R+GP+++ ++G TRAFRNI G++
Sbjct: 173 IAAIDDVNRVNDSREIRAGRGKMRNRRYVARRGPMLVMPNNKG-TRAFRNIFGLDLANVS 231
Query: 181 XXXXXXXAPGG 213
APGG
Sbjct: 232 ALTLLHLAPGG 242
>UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal
protein L4; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L4 - Rattus norvegicus
Length = 140
Score = 62.1 bits (144), Expect = 2e-08
Identities = 34/75 (45%), Positives = 46/75 (61%)
Frame = +3
Query: 327 KMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILE 506
KM N+DL+R+LK EI++ L+AP K + K NPLTN + MLKLNP A + R I
Sbjct: 3 KMMNSDLSRILKIPEIQRALQAPCKEIQHRVSKKNPLTNLRIMLKLNPDAKTMHRNTI-- 60
Query: 507 LAEGRT*RLLLMPRR 551
L E R +L + R+
Sbjct: 61 LPEARNHKLQVKSRK 75
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 59.3 bits (137), Expect = 1e-07
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +1
Query: 10 WSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FNKDQGLTRAFRNIPGVEXXXXXXX 186
+ D+ +V + R+RAGKGKMR R+ + GPLII + + + +A RN+ GV+
Sbjct: 173 YDDVERVKERIRIRAGKGKMRGRKYKEPIGPLIIVHDSNSPIIKAARNLAGVDVVNAKDV 232
Query: 187 XXXXXAPGGHLGRFVIWTQSA 249
APG H GR I+T+S+
Sbjct: 233 SVIHLAPGAHPGRLTIYTESS 253
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 58.8 bits (136), Expect = 2e-07
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 LKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK-DQGLTRAFRNIPGVEXXXX 177
L W D+ + + ++RAGKGKMR RR + K L++ + + L A RN PGV+
Sbjct: 191 LGLWPDVERAAEGVKIRAGKGKMRGRRYKEPKSVLVVVSDLNAPLIAAVRNFPGVDVVAV 250
Query: 178 XXXXXXXXAPGGHLGRFVIWTQSA 249
APGG GR +WT A
Sbjct: 251 NNLNILVLAPGGVPGRLTLWTAPA 274
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/87 (36%), Positives = 46/87 (52%)
Frame = +1
Query: 1 LKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXX 180
L + DI + + + +RAG+GKMR RR Q K LI+ + +AFR++PGV+
Sbjct: 165 LGVYEDIERSREGKHIRAGRGKMRGRRYKQPKSVLIVARNSSAM-KAFRSLPGVDIASPN 223
Query: 181 XXXXXXXAPGGHLGRFVIWTQSAFGGL 261
APGG GR I+T+ A L
Sbjct: 224 SLSIRKLAPGGVGGRLTIFTEGAIESL 250
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 56.4 bits (130), Expect = 8e-07
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1
Query: 16 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK-DQGLTRAFRNIPGVEXXXXXXXXX 192
++ +VY+ +R RAGKGK R R I+RKGPLI+ N ++ L +A NIPG++
Sbjct: 180 ELERVYEIKR-RAGKGKRRGRAYIERKGPLIVVNDYNEQLFKAVDNIPGLDIEEVPNLNV 238
Query: 193 XXXAPGGHLGRFVIWTQSA 249
APG GR +I ++ A
Sbjct: 239 ELLAPGAKPGRLLIISKDA 257
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 54.4 bits (125), Expect = 3e-06
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +1
Query: 40 QRLRAGKGKMRNRRRIQRKGPLIIFNKD--QGLTRAFRNIPGVEXXXXXXXXXXXXAPGG 213
+R+ G+ R+ R+ + GPLII +G RAFRNIPGVE AP G
Sbjct: 180 KRIDKVTGRARDGRKKRPVGPLIILRATAVEG-KRAFRNIPGVEVACVERLNLLKLAPAG 238
Query: 214 HLGRFVIWTQSAFGGLTPY 270
LGR +W++SAF L Y
Sbjct: 239 ALGRLCVWSKSAFEALDDY 257
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 54.0 bits (124), Expect = 4e-06
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 10 WSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG-LTRAFRNIPGVEXXXXXXX 186
+ D+L+ + +R AGKGKMR RR K L + + L A + +PGV+
Sbjct: 179 YEDVLRAKEGKRYNAGKGKMRGRRYKVPKSVLFVLEDPRSPLALAVKGMPGVDVVTPTLL 238
Query: 187 XXXXXAPGGHLGRFVIWTQSA 249
APGGH GR I+T A
Sbjct: 239 SVLHLAPGGHPGRLTIYTTEA 259
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 44.0 bits (99), Expect = 0.005
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = +1
Query: 70 RNRRRIQRK--GPLIIFNKD--QGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIW 237
R +R+ +++ GPL++ +G RAFRNIPGV+ AP G LGR VI+
Sbjct: 187 RTKRKGKKRPVGPLVVMRSTAVEG-KRAFRNIPGVDVMSVEHMNLLKLAPAGTLGRLVIF 245
Query: 238 TQSAF 252
++SAF
Sbjct: 246 SKSAF 250
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 38.7 bits (86), Expect = 0.17
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +1
Query: 43 RLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLG 222
+++AG+G R R+ +R ++ D+ T A RN+ G + APGG G
Sbjct: 173 KIKAGQGSARGRK-YRRPASILFVTSDEPSTAA-RNLAGADVATASEVNTEDLAPGGAPG 230
Query: 223 RFVIWTQSA 249
R ++T+SA
Sbjct: 231 RLTVFTESA 239
>UniRef50_Q23TC4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 966
Score = 34.7 bits (76), Expect = 2.8
Identities = 19/65 (29%), Positives = 37/65 (56%)
Frame = +3
Query: 321 QPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAI 500
Q K AN + RLL S+ + ++P+ ++ KLNP++ N + L LN + L +K++
Sbjct: 330 QHKRANIQV-RLLSSEISKNQSQSPSNNILNQQNKLNPISTNTSQL-LNKQISQLNQKSL 387
Query: 501 LELAE 515
+ ++
Sbjct: 388 TQRSQ 392
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 33.9 bits (74), Expect = 4.9
Identities = 22/91 (24%), Positives = 39/91 (42%)
Frame = +1
Query: 1 LKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXX 180
L ++D+ ++ + ++ R GK +R R + K L + D + RA PGV
Sbjct: 169 LGLFADVNRL-EGRKPRTGKSALRGRPKKIGKSILFVVGADGPVIRAVGGFPGVTARPAR 227
Query: 181 XXXXXXXAPGGHLGRFVIWTQSAFGGLTPYS 273
APG R +++++A L S
Sbjct: 228 DLSVLDLAPGAEPARLTVYSKAAIESLAGIS 258
>UniRef50_UPI00005E1AE6 Cluster: putative non-structural protein
NS4/5; n=1; Aquareovirus A|Rep: putative non-structural
protein NS4/5 - Aquareovirus A
Length = 452
Score = 33.5 bits (73), Expect = 6.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 252 RRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLT 350
RRLD L SW TP ++ +P+P++ T L+
Sbjct: 71 RRLDVLGDSWSTPKHSLRSHRVPEPRVRRTSLS 103
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 33.5 bits (73), Expect = 6.5
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 33 QVSASSCW*G*NAQPSSYPA*GTPHNLQQGSGSD---SRLPQHPRCGXXXXXXXXXXXXG 203
+++ CW +AQP P G P + G +R+PQH R G G
Sbjct: 236 RLARDPCWPRQDAQP---PLRGAPRS-DAGDAEQQGHARVPQHLRAGPGECERAEPAAPG 291
Query: 204 SGRPSWTFRHLDSVRIR 254
+ P W R LD+V +R
Sbjct: 292 ARWPRWPLRDLDAVCVR 308
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,189,080
Number of Sequences: 1657284
Number of extensions: 12431910
Number of successful extensions: 32141
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 31179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32104
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70377768045
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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