Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10404
         (565 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   1.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   4.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   4.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   5.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   5.5  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 138 PFRWCISRKGHRPRES 185
           PF+W   +K  R RES
Sbjct: 323 PFKWLFKKKKRRNRES 338


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +3

Query: 345 GHAVGDIPGVR 377
           G AVGD+PG+R
Sbjct: 62  GTAVGDVPGLR 72


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = -1

Query: 532 YYVLGFYIYELINNALPDSRSLITMYTYDL 443
           Y +   Y++  I +   D+ +L+ +YT++L
Sbjct: 292 YVIDTMYLFIHIRSRQEDTDTLVVIYTFNL 321


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = -1

Query: 532 YYVLGFYIYELINNALPDSRSLITMYTYDL 443
           Y +   Y++  I +   D+ +L+ +YT++L
Sbjct: 248 YVIDTMYLFIHIRSRQEDTDTLVVIYTFNL 277


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -2

Query: 459 CTPMILVAPFSLCRERGET 403
           C P + V P   C E G T
Sbjct: 163 CDPAVCVLPDCFCSEDGTT 181


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 11/66 (16%)
 Frame = -3

Query: 563 FFFFFCC-----------TQYLLCTRILHL*TYKQRASRQQVTYHNVHL*SWSLLFLFVE 417
           FFF FCC           T  L  +++L+  TY+Q   RQ+ +    H   W+   +   
Sbjct: 11  FFFSFCCILFFIYLYWQQTSNLTTSKLLY--TYRQPYPRQKKS----HPPQWTWQCINQR 64

Query: 416 SEERHV 399
            E RH+
Sbjct: 65  CERRHI 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,087
Number of Sequences: 336
Number of extensions: 3221
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)