Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10403
         (796 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   5.7  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   5.7  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    22   7.5  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    22   7.5  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   7.5  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    22   7.5  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    22   7.5  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +3

Query: 384 PHWERGANTTISFFFGFGMSSTPR 455
           P W+ G  + ++FF     S +P+
Sbjct: 68  PRWKNGVPSNLNFFLKNDESESPK 91


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/25 (28%), Positives = 17/25 (68%)
 Frame = +3

Query: 90  VHRSKHITFIIYCSEKTRLRF*SIK 164
           ++ +   TF+++C+E+  LR  S++
Sbjct: 209 IYHNDDKTFLVWCNEEDHLRIISMQ 233


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 560 DEGLDERMNP*TQPSFLAGFFQ 625
           DEG +   N   +P+FL G++Q
Sbjct: 21  DEGSNWNWNTLLRPNFLDGWYQ 42


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 560 DEGLDERMNP*TQPSFLAGFFQ 625
           DEG +   N   +P+FL G++Q
Sbjct: 65  DEGSNWNWNTLLRPNFLDGWYQ 86


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 378 SAPHWERGANTTISFFFGFGMS 443
           S P W  G N   +F  G G+S
Sbjct: 577 SVPDWMMGGNANRNFMPGRGIS 598


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 560 DEGLDERMNP*TQPSFLAGFFQ 625
           DEG +   N   +P+FL G++Q
Sbjct: 65  DEGSNWNWNTLLRPNFLDGWYQ 86


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 560 DEGLDERMNP*TQPSFLAGFFQ 625
           DEG +   N   +P+FL G++Q
Sbjct: 65  DEGSNWNWNTLLRPNFLDGWYQ 86


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,329
Number of Sequences: 438
Number of extensions: 3747
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)