Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10401
(768 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0017 + 18937774-18937864,18938505-18940945 170 9e-43
04_01_0103 + 1082077-1082167,1083037-1085477 168 5e-42
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 162 2e-40
01_06_0662 + 30987187-30987277,30987825-30990214 150 1e-36
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 111 4e-25
02_04_0148 - 20198407-20201424 54 1e-07
03_05_0511 + 25056018-25059107 51 9e-07
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 33 0.19
04_01_0330 - 4369326-4370852 30 2.3
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 29 5.4
10_01_0323 + 3530246-3530446,3531091-3531726,3531860-3532018,353... 28 7.1
03_06_0285 + 32848085-32848988,32849057-32849245,32850136-328503... 28 7.1
07_03_0698 - 20765305-20768526 28 9.4
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 170 bits (414), Expect = 9e-43
Identities = 90/171 (52%), Positives = 112/171 (65%), Gaps = 2/171 (1%)
Frame = +2
Query: 254 IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLL 433
IKDSVVAGFQWA+KEG +AEEN+RG+ F + DV LH DAIHRGGGQ+IPT RR +YA L
Sbjct: 660 IKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQL 719
Query: 434 TAQPRLMEPVYLCEIQCPEVAVGGI-TVC*TDVVVTFSKSPRWQVHLCSL*RPTYLSMSR 610
TA+PRL+EPVYL EIQ PE A+GGI V F + R L ++ YL +
Sbjct: 720 TAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNI--KAYLPVIE 777
Query: 611 SVLLPICV-PTPADKAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKG 760
S + + +AFPQCVFDHW ++ DP E S+ +VQ+ RKRKG
Sbjct: 778 SFGFSSQLRAATSGQAFPQCVFDHWDMMTSDPLEAGSQASTLVQDIRKRKG 828
Score = 126 bits (305), Expect = 1e-29
Identities = 58/111 (52%), Positives = 81/111 (72%), Gaps = 5/111 (4%)
Frame = +3
Query: 6 LSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWC 185
+SKSPNKHNRL+M+A+P+ +GL E ID+GR+ PRDD K R++ L+E++ +D A+KIWC
Sbjct: 577 MSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWC 636
Query: 186 FGPEGTGPNILVDCSKGVQYLNELRTLL-----WLDSSGPLRKELWLKRIC 323
FGPE TGPN++VD KGVQYLNE++ + W G L +E ++ IC
Sbjct: 637 FGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEEN-MRGIC 686
Score = 75.8 bits (178), Expect = 4e-14
Identities = 33/54 (61%), Positives = 42/54 (77%)
Frame = +1
Query: 499 GWYHGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQGLP 660
G +GVLN++RGHVFEE Q GTP++ +KAYLPV ESFGF++ LR+ T GQ P
Sbjct: 742 GGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSQLRAATSGQAFP 795
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 168 bits (408), Expect = 5e-42
Identities = 89/171 (52%), Positives = 111/171 (64%), Gaps = 2/171 (1%)
Frame = +2
Query: 254 IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLL 433
IKDSVVAGFQWA+KEG +AEEN+RG+ F + DV LH DAIHRGGGQ+IPT RR +YA L
Sbjct: 660 IKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQL 719
Query: 434 TAQPRLMEPVYLCEIQCPEVAVGGI-TVC*TDVVVTFSKSPRWQVHLCSL*RPTYLSMSR 610
TA+PRL+EPVYL EIQ PE A+GGI V F + R L ++ YL +
Sbjct: 720 TAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNI--KAYLPVIE 777
Query: 611 SVLLPICV-PTPADKAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKG 760
S + + +AFPQCVFDHW ++ DP E S+ +V + RKRKG
Sbjct: 778 SFGFSSQLRAATSGQAFPQCVFDHWDMMTSDPLEVSSQANQLVLDIRKRKG 828
Score = 126 bits (305), Expect = 1e-29
Identities = 58/111 (52%), Positives = 81/111 (72%), Gaps = 5/111 (4%)
Frame = +3
Query: 6 LSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWC 185
+SKSPNKHNRL+M+A+P+ +GL E ID+GR+ PRDD K R++ L+E++ +D A+KIWC
Sbjct: 577 MSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWC 636
Query: 186 FGPEGTGPNILVDCSKGVQYLNELRTLL-----WLDSSGPLRKELWLKRIC 323
FGPE TGPN++VD KGVQYLNE++ + W G L +E ++ IC
Sbjct: 637 FGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEEN-MRGIC 686
Score = 76.6 bits (180), Expect = 2e-14
Identities = 40/90 (44%), Positives = 53/90 (58%)
Frame = +1
Query: 499 GWYHGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQGLPAVRIRP 678
G +GVLN++RGHVFEE Q GTP++ +KAYLPV ESFGF++ LR+ T GQ P
Sbjct: 742 GGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSQLRAATSGQAFPQCVFDH 801
Query: 679 LAGPPWRPVRTSEQALQRCTGNEKEERLRK 768
P+ S QA Q K + L++
Sbjct: 802 WDMMTSDPLEVSSQANQLVLDIRKRKGLKE 831
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 162 bits (394), Expect = 2e-40
Identities = 85/171 (49%), Positives = 111/171 (64%), Gaps = 2/171 (1%)
Frame = +2
Query: 254 IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLL 433
IKDSVVAGFQWA+KEG +AEEN+RGV F + DVTLH+D+IHRGGGQ+IPT RR +YA L
Sbjct: 670 IKDSVVAGFQWASKEGALAEENMRGVCFELCDVTLHSDSIHRGGGQLIPTARRAMYAAQL 729
Query: 434 TAQPRLMEPVYLCEIQCPEVAVGGI-TVC*TDVVVTFSKSPRWQVHLCSL*RPTYLSMSR 610
TA PRLMEP+Y +IQ P+ AVG + V + +S R L +L YL +++
Sbjct: 730 TASPRLMEPMYQVDIQVPKTAVGNVYGVLNSRNGELVEESERTGTPLSNL--RFYLPVAK 787
Query: 611 SV-LLPICVPTPADKAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKG 760
S + +AFPQC+F HWQ + DP + S+ V+ + RKRKG
Sbjct: 788 SFDFTEKLRAETSGQAFPQCIFHHWQTMRSDPFQEGSEAAKVITDIRKRKG 838
Score = 101 bits (243), Expect = 5e-22
Identities = 51/112 (45%), Positives = 73/112 (65%), Gaps = 13/112 (11%)
Frame = +3
Query: 6 LSKSPNKHNRLFMKAQPMP-DGLPED-------IDEGRVNPRDDFKTRARYLTEKYEYDV 161
+SKSPNKHNRL+M+A+P+ + L +D ID+ R+ P+DD K R + L+E++ +D
Sbjct: 579 MSKSPNKHNRLYMEARPLDKEDLQQDEPSLCKAIDDERIGPKDDIKERGKILSEEFGWDK 638
Query: 162 TEARKIWCFGPEGTGPNILVDCSKGVQYLNELRTLL-----WLDSSGPLRKE 302
A+KIW FGPE GPN+LVD KGVQYL+E++ + W G L +E
Sbjct: 639 DLAKKIWAFGPETKGPNLLVDMCKGVQYLSEIKDSVVAGFQWASKEGALAEE 690
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 150 bits (363), Expect = 1e-36
Identities = 83/160 (51%), Positives = 104/160 (65%), Gaps = 4/160 (2%)
Frame = +2
Query: 254 IKDSVVAGFQWAAKEGVMAEENLRG--VRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYAC 427
IKDSVVAGFQWA+KEG +AEEN+RG + F + DV LH+DAIHRGGGQIIPT RR +YA
Sbjct: 656 IKDSVVAGFQWASKEGALAEENMRGRGICFEVCDVILHSDAIHRGGGQIIPTARRVIYAA 715
Query: 428 LLTAQPRLMEPVYLCEIQCPEVAVGGI-TVC*TDVVVTFSKSPRWQVHLCSL*RPTYLSM 604
LTA+PRL+EPVYL EIQ PE A+GGI +V F + R L ++ YL +
Sbjct: 716 QLTAKPRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVFEEMQRPGTPLYNI--KAYLPV 773
Query: 605 SRSV-LLPICVPTPADKAFPQCVFDHWQVLPGDPCEPQSK 721
S + +AFP VFDHW++L DP EP ++
Sbjct: 774 IESFGFTSTLRAATSGQAFPLFVFDHWEMLSVDPLEPGTR 813
Score = 133 bits (322), Expect = 1e-31
Identities = 66/124 (53%), Positives = 87/124 (70%), Gaps = 6/124 (4%)
Frame = +3
Query: 6 LSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWC 185
+SKSPNKHNRL+M+A+PM +GLPE IDEGR+ PRDD K R++ L+E++ +D A+KIWC
Sbjct: 573 MSKSPNKHNRLYMEARPMEEGLPEAIDEGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWC 632
Query: 186 FGPEGTGPNILVDCSKGVQYLNELRTLL-----WLDSSGPLRKELWLKR-ICVVFDSTSM 347
FGPE TGPNI+VD KGVQYLNE++ + W G L +E R IC F+ +
Sbjct: 633 FGPETTGPNIVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGRGIC--FEVCDV 690
Query: 348 M*HS 359
+ HS
Sbjct: 691 ILHS 694
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 111 bits (268), Expect = 4e-25
Identities = 63/155 (40%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Frame = +2
Query: 254 IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLL 433
+KDS+V GFQW A+EG + +E +R V+F I + + + +HRGGGQIIPT RR +Y+ L
Sbjct: 786 VKDSIVQGFQWGAREGPLCDEPIRNVKFKILNANIAPEPLHRGGGQIIPTARRVVYSAFL 845
Query: 434 TAQPRLMEPVYLCEIQCPEVAVGGI-TVC--*TDVVVTFSKSPRWQVHLCSL*RPTYLSM 604
A PRLMEPVY EIQ P V I TV V P +++ P S
Sbjct: 846 MANPRLMEPVYYIEIQTPIDCVSAIYTVLSRRRGHVTADVPKPGTPIYVVKAFLPVIESF 905
Query: 605 SRSVLLPICVPTPADKAFPQCVFDHWQVLPGDPCE 709
L +AF VFDHW ++PGDP +
Sbjct: 906 GFETDLRY---HTQGQAFCLSVFDHWAIVPGDPLD 937
Score = 78.2 bits (184), Expect = 7e-15
Identities = 34/80 (42%), Positives = 51/80 (63%)
Frame = +3
Query: 3 CLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIW 182
C +++PNK N++ M A+P+ GL EDI+ G V+ K + ++Y++DV AR IW
Sbjct: 698 CFAETPNKRNKITMVAEPLEKGLAEDIENGLVSLDSRQKEITDFFRQRYQWDVLAARSIW 757
Query: 183 CFGPEGTGPNILVDCSKGVQ 242
FGPE GPNIL+D + V+
Sbjct: 758 AFGPEKQGPNILLDDTLSVE 777
Score = 61.3 bits (142), Expect = 8e-10
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = +1
Query: 514 VLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQ 651
VL+RRRGHV + GTP+++VKA+LPV ESFGF DLR +T GQ
Sbjct: 873 VLSRRRGHVTADVPKPGTPIYVVKAFLPVIESFGFETDLRYHTQGQ 918
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 54.0 bits (124), Expect = 1e-07
Identities = 44/163 (26%), Positives = 66/163 (40%), Gaps = 10/163 (6%)
Frame = +2
Query: 245 PQ*IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTL---------HTDAIHRGGGQII 397
P+ +K+S+ GFQ A G + E G+ F + L +D GQII
Sbjct: 787 PETVKNSIATGFQLATNAGPLCGEPTWGLIFLVKPYILPDSADASNNQSDHYSTFSGQII 846
Query: 398 PTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGITVC*TDVVVTFSKSPRWQVHLCS 577
R A +L ++PRL+EP+Y CE+ P +G + + K Q
Sbjct: 847 TAVREACQAAILESKPRLVEPMYFCELTTPTEQLGSMYAVLGNCRARVLKE-EMQEGTSL 905
Query: 578 L*RPTYLSMSRSVLLPICV-PTPADKAFPQCVFDHWQVLPGDP 703
YLS++ S + A A F HW+ +P DP
Sbjct: 906 FTVHAYLSVAESSEFSKKLRNATAGAASALLAFSHWETVPQDP 948
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 51.2 bits (117), Expect = 9e-07
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +1
Query: 499 GWYHGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGG 648
G + VL+R+R V +E GT +F V AYLPV ES GF+ +LRS T G
Sbjct: 905 GATYAVLSRKRARVLKEEMQEGTSLFTVHAYLPVAESVGFSNELRSVTAG 954
Score = 46.4 bits (105), Expect = 3e-05
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 9/159 (5%)
Frame = +2
Query: 254 IKDSVVAGFQWAAKEGVMAEENLRGVRFNI--YDVTLHTDAIHRG------GGQIIPTTR 409
+++ +V+GFQ A G + +E + G+ F + Y H+DA + GQ+I +
Sbjct: 815 LRNCIVSGFQLATNAGPLCDEPMWGLVFVVEPYIFCDHSDAANHSEQYNIFSGQVITAVK 874
Query: 410 RCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGITVC*TDVVVTFSKSPRWQVHLCSL*RP 589
++ +PRL+E +Y CE+ P +G + K Q
Sbjct: 875 EACREAVVQNKPRLVEAMYFCELTTPTEQLGATYAVLSRKRARVLKE-EMQEGTSLFTVH 933
Query: 590 TYLSMSRSV-LLPICVPTPADKAFPQCVFDHWQVLPGDP 703
YL ++ SV A A V HW+ +P DP
Sbjct: 934 AYLPVAESVGFSNELRSVTAGAASALLVLSHWEAIPEDP 972
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +1
Query: 499 GWYHGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQG 654
G G +N+R+G + Q +V ++P+N FG++ LRS T G+G
Sbjct: 690 GTVTGDMNKRKGIIVGNDQEGDDT--VVVCHVPLNNMFGYSTALRSMTQGKG 739
>04_01_0330 - 4369326-4370852
Length = 508
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 402 VGMIWPPPLWMASVWSVTS 346
+G IWPPP+W S TS
Sbjct: 487 IGKIWPPPVWFKRCTSATS 505
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/94 (25%), Positives = 41/94 (43%)
Frame = +2
Query: 227 LQRSSVPQ*IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTT 406
++ +VP+ V+ G + + GV+A + +R + D + H QI
Sbjct: 579 IKGGAVPKEYVPGVMKGIEESLPNGVLAGYPVVDLRAVLVDGSYHDVDSSVLAFQI--AA 636
Query: 407 RRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGI 508
R L A PRL+EP+ E+ PE +G +
Sbjct: 637 RGAFREGLRKAGPRLLEPIMKVEVITPEEHLGDV 670
>10_01_0323 +
3530246-3530446,3531091-3531726,3531860-3532018,
3532276-3532569,3557747-3557941,3558875-3559095,
3559190-3559373,3559797-3559973,3561319-3561824,
3561880-3562060
Length = 917
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = -3
Query: 352 YIIDVESNTTQILFSHNSFLSGPLESSHNRVLNSLRY*TPLEQSTRMLGPVPSGPKHQI 176
Y I++ I+ S+N L G LES H+R L+ +++ + L PS P H +
Sbjct: 644 YAINIAHRRVDIMDSNNYNLIGTLESDHHRALSK----RIVKRLSDALHEGPSVPPHMV 698
>03_06_0285 +
32848085-32848988,32849057-32849245,32850136-32850311,
32850569-32851141
Length = 613
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 734 QRCRACSEVRTGLQGGPANGRIR-TAGRPCPP 642
++ +A S +G GPAN RIR + G P PP
Sbjct: 468 EKKKAASSSSSGGSSGPANKRIRASTGGPMPP 499
>07_03_0698 - 20765305-20768526
Length = 1073
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +2
Query: 320 LRGVRFNIYDVTLHTDAIHRG----GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQ 481
L G + ++ D+ L D +HRG ++ P +L P+L+E +++C I+
Sbjct: 870 LSGTKASLIDLFLQVDKLHRGLLSLSIRMDPPGNWDAIDAILLRPPKLLESLHICSIR 927
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,915,370
Number of Sequences: 37544
Number of extensions: 618814
Number of successful extensions: 1735
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1727
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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