Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10401
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 196 1e-50
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 196 1e-50
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 108 4e-24
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 108 4e-24
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 38 0.010
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 28 6.4
U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical pr... 28 8.4
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein
F25H5.4 protein.
Length = 852
Score = 196 bits (479), Expect = 1e-50
Identities = 100/171 (58%), Positives = 120/171 (70%), Gaps = 2/171 (1%)
Frame = +2
Query: 254 IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLL 433
IKDSVVAGFQWA +EGV+++EN+RGVRFN++DVTLH DAIHRGGGQIIPT RR YA +L
Sbjct: 669 IKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVL 728
Query: 434 TAQPRLMEPVYLCEIQCPEVAVGGI-TVC*TDVVVTFSKSPRWQVHLCSL*RPTYLSMSR 610
TA+PRL+EPVYL EIQCPE AVGGI V F +S + + YL ++
Sbjct: 729 TAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVV--KAYLPVNE 786
Query: 611 SVLLPICV-PTPADKAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKG 760
S + +AFPQCVFDHWQVLPGDP E +KP +V +TRKRKG
Sbjct: 787 SFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKG 837
Score = 152 bits (368), Expect = 3e-37
Identities = 65/86 (75%), Positives = 75/86 (87%)
Frame = +3
Query: 3 CLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIW 182
CLSKSPNKHNRL AQPMPDGL +DI+ G VN RD+FK RA+ L EKYEYDVTEARKIW
Sbjct: 585 CLSKSPNKHNRLHCTAQPMPDGLADDIEGGTVNARDEFKARAKILAEKYEYDVTEARKIW 644
Query: 183 CFGPEGTGPNILVDCSKGVQYLNELR 260
CFGP+GTGPN+L+D +KGVQYLNE++
Sbjct: 645 CFGPDGTGPNLLMDVTKGVQYLNEIK 670
Score = 104 bits (250), Expect = 6e-23
Identities = 47/54 (87%), Positives = 49/54 (90%)
Frame = +1
Query: 499 GWYHGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQGLP 660
G +GVLNRRRGHVFEESQV GTPMF+VKAYLPVNESFGFTADLRSNTGGQ P
Sbjct: 751 GGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFP 804
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 196 bits (479), Expect = 1e-50
Identities = 100/171 (58%), Positives = 120/171 (70%), Gaps = 2/171 (1%)
Frame = +2
Query: 254 IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLL 433
IKDSVVAGFQWA +EGV+++EN+RGVRFN++DVTLH DAIHRGGGQIIPT RR YA +L
Sbjct: 669 IKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVL 728
Query: 434 TAQPRLMEPVYLCEIQCPEVAVGGI-TVC*TDVVVTFSKSPRWQVHLCSL*RPTYLSMSR 610
TA+PRL+EPVYL EIQCPE AVGGI V F +S + + YL ++
Sbjct: 729 TAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVV--KAYLPVNE 786
Query: 611 SVLLPICV-PTPADKAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKG 760
S + +AFPQCVFDHWQVLPGDP E +KP +V +TRKRKG
Sbjct: 787 SFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKG 837
Score = 146 bits (354), Expect = 2e-35
Identities = 63/86 (73%), Positives = 74/86 (86%)
Frame = +3
Query: 3 CLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIW 182
CLSKSPNKHNRL AQPMPDGL +DI+ G V+ RD+FK RA+Y EKYEY VTEARKIW
Sbjct: 585 CLSKSPNKHNRLHCTAQPMPDGLADDIEGGTVSARDEFKARAKYPGEKYEYAVTEARKIW 644
Query: 183 CFGPEGTGPNILVDCSKGVQYLNELR 260
CFGP+GTGPN+L+D +KGVQYLNE++
Sbjct: 645 CFGPDGTGPNLLMDVTKGVQYLNEIK 670
Score = 104 bits (250), Expect = 6e-23
Identities = 47/54 (87%), Positives = 49/54 (90%)
Frame = +1
Query: 499 GWYHGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQGLP 660
G +GVLNRRRGHVFEESQV GTPMF+VKAYLPVNESFGFTADLRSNTGGQ P
Sbjct: 751 GGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFP 804
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 108 bits (260), Expect = 4e-24
Identities = 60/155 (38%), Positives = 84/155 (54%), Gaps = 3/155 (1%)
Frame = +2
Query: 254 IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLL 433
+++S+V GFQWA +EG + EE +R V+F + D + T+ ++RGGGQ+IPT RRC Y+ L
Sbjct: 766 VRESLVQGFQWATREGPLCEEPIRQVKFKLLDAAIATEPLYRGGGQMIPTARRCAYSAFL 825
Query: 434 TAQPRLMEPVYLCEIQCPEVAVGGI-TVC--*TDVVVTFSKSPRWQVHLCSL*RPTYLSM 604
A PRLMEP Y E+ P V + TV V T + P ++ S P S
Sbjct: 826 MATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSF 885
Query: 605 SRSVLLPICVPTPADKAFPQCVFDHWQVLPGDPCE 709
L I +AF F HWQ++PGDP +
Sbjct: 886 GFETDLRI---HTQGQAFCMSAFHHWQLVPGDPLD 917
Score = 68.9 bits (161), Expect = 4e-12
Identities = 30/74 (40%), Positives = 45/74 (60%)
Frame = +3
Query: 3 CLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIW 182
C +++PNK N++ M A+P+ L EDI+ V + + + KY +D+ AR IW
Sbjct: 678 CFAETPNKKNKITMMAEPLEKQLDEDIENEVVQIGWNRRRLGEFFQTKYNWDLLAARSIW 737
Query: 183 CFGPEGTGPNILVD 224
FGP+ TGPNIL+D
Sbjct: 738 AFGPDTTGPNILLD 751
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 108 bits (260), Expect = 4e-24
Identities = 60/155 (38%), Positives = 84/155 (54%), Gaps = 3/155 (1%)
Frame = +2
Query: 254 IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLL 433
+++S+V GFQWA +EG + EE +R V+F + D + T+ ++RGGGQ+IPT RRC Y+ L
Sbjct: 641 VRESLVQGFQWATREGPLCEEPIRQVKFKLLDAAIATEPLYRGGGQMIPTARRCAYSAFL 700
Query: 434 TAQPRLMEPVYLCEIQCPEVAVGGI-TVC--*TDVVVTFSKSPRWQVHLCSL*RPTYLSM 604
A PRLMEP Y E+ P V + TV V T + P ++ S P S
Sbjct: 701 MATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSF 760
Query: 605 SRSVLLPICVPTPADKAFPQCVFDHWQVLPGDPCE 709
L I +AF F HWQ++PGDP +
Sbjct: 761 GFETDLRI---HTQGQAFCMSAFHHWQLVPGDPLD 792
Score = 64.9 bits (151), Expect = 6e-11
Identities = 29/74 (39%), Positives = 44/74 (59%)
Frame = +3
Query: 3 CLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIW 182
C +++PNK N++ M A+P+ L EDI+ V + + + KY +D+ AR IW
Sbjct: 553 CFAETPNKKNKITMMAEPLEKQLDEDIENEVVQIGWNRRRLGEFFQTKYNWDLLAARSIW 612
Query: 183 CFGPEGTGPNILVD 224
FG + TGPNIL+D
Sbjct: 613 AFGLDTTGPNILLD 626
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +1
Query: 499 GWYHGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGG 648
G H VL++R+ V E T +F V + +PV ESF F LR T G
Sbjct: 771 GKVHAVLSQRKSKVLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSG 820
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 517 LNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQG 654
L +R + G I +A P+++ FG+T++LRS T G+G
Sbjct: 665 LTQRNALITTTDSTEGYATVICEA--PLSDMFGYTSELRSLTEGKG 708
>U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical
protein F45E4.7a protein.
Length = 868
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +3
Query: 42 MKAQPMPDGLPEDIDEGRVNP---RDDFKTRARYLTEKYEYDVTEARKI 179
++ P P PE R NP RDD + ++ E+ VTE R I
Sbjct: 87 IQIHPAPIAGPESTSSFRTNPEENRDDEEDNVEETDQEIEFPVTEERSI 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,195,723
Number of Sequences: 27780
Number of extensions: 488533
Number of successful extensions: 1418
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1414
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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