Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10400
(382 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 144 6e-35
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 144 6e-35
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 144 6e-35
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 144 6e-35
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 144 6e-35
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 144 6e-35
AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 93 2e-19
BC013983-1|AAH13983.1| 433|Homo sapiens sparc/osteonectin, cwcv... 28 8.7
BC003017-1|AAH03017.1| 433|Homo sapiens sparc/osteonectin, cwcv... 28 8.7
BC000460-1|AAH00460.1| 433|Homo sapiens sparc/osteonectin, cwcv... 28 8.7
AY358973-1|AAQ89332.1| 436|Homo sapiens HSAJ1454 protein. 28 8.7
AJ001454-1|CAA04775.1| 436|Homo sapiens testican-3 protein. 28 8.7
AB056866-1|BAB64908.1| 313|Homo sapiens testican 3 splicing var... 28 8.7
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 144 bits (350), Expect = 6e-35
Identities = 67/86 (77%), Positives = 77/86 (89%)
Frame = +3
Query: 3 GKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKL 182
GKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKL
Sbjct: 89 GKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKL 148
Query: 183 DGSQLIKVHLDKNQQTTIEHKVDTSS 260
DGS+LIKVHLDK QQ +EHKV+T S
Sbjct: 149 DGSRLIKVHLDKAQQNNVEHKVETFS 174
Score = 33.5 bits (73), Expect = 0.23
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +2
Query: 263 VYKKLTGREVTFEFPE 310
VYKKLTG++V FEFPE
Sbjct: 176 VYKKLTGKDVNFEFPE 191
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 144 bits (350), Expect = 6e-35
Identities = 67/86 (77%), Positives = 77/86 (89%)
Frame = +3
Query: 3 GKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKL 182
GKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKL
Sbjct: 87 GKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKL 146
Query: 183 DGSQLIKVHLDKNQQTTIEHKVDTSS 260
DGS+LIKVHLDK QQ +EHKV+T S
Sbjct: 147 DGSRLIKVHLDKAQQNNVEHKVETFS 172
Score = 33.5 bits (73), Expect = 0.23
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +2
Query: 263 VYKKLTGREVTFEFPE 310
VYKKLTG++V FEFPE
Sbjct: 174 VYKKLTGKDVNFEFPE 189
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 144 bits (350), Expect = 6e-35
Identities = 67/86 (77%), Positives = 77/86 (89%)
Frame = +3
Query: 3 GKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKL 182
GKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKL
Sbjct: 89 GKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKL 148
Query: 183 DGSQLIKVHLDKNQQTTIEHKVDTSS 260
DGS+LIKVHLDK QQ +EHKV+T S
Sbjct: 149 DGSRLIKVHLDKAQQNNVEHKVETFS 174
Score = 33.5 bits (73), Expect = 0.23
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +2
Query: 263 VYKKLTGREVTFEFPE 310
VYKKLTG++V FEFPE
Sbjct: 176 VYKKLTGKDVNFEFPE 191
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 144 bits (350), Expect = 6e-35
Identities = 67/86 (77%), Positives = 77/86 (89%)
Frame = +3
Query: 3 GKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKL 182
GKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKL
Sbjct: 89 GKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKL 148
Query: 183 DGSQLIKVHLDKNQQTTIEHKVDTSS 260
DGS+LIKVHLDK QQ +EHKV+T S
Sbjct: 149 DGSRLIKVHLDKAQQNNVEHKVETFS 174
Score = 33.5 bits (73), Expect = 0.23
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +2
Query: 263 VYKKLTGREVTFEFPE 310
VYKKLTG++V FEFPE
Sbjct: 176 VYKKLTGKDVNFEFPE 191
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 144 bits (350), Expect = 6e-35
Identities = 67/86 (77%), Positives = 77/86 (89%)
Frame = +3
Query: 3 GKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKL 182
GKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKL
Sbjct: 89 GKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKL 148
Query: 183 DGSQLIKVHLDKNQQTTIEHKVDTSS 260
DGS+LIKVHLDK QQ +EHKV+T S
Sbjct: 149 DGSRLIKVHLDKAQQNNVEHKVETFS 174
Score = 33.5 bits (73), Expect = 0.23
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +2
Query: 263 VYKKLTGREVTFEFPE 310
VYKKLTG++V FEFPE
Sbjct: 176 VYKKLTGKDVNFEFPE 191
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 144 bits (350), Expect = 6e-35
Identities = 67/86 (77%), Positives = 77/86 (89%)
Frame = +3
Query: 3 GKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKL 182
GKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKL
Sbjct: 89 GKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKL 148
Query: 183 DGSQLIKVHLDKNQQTTIEHKVDTSS 260
DGS+LIKVHLDK QQ +EHKV+T S
Sbjct: 149 DGSRLIKVHLDKAQQNNVEHKVETFS 174
Score = 33.5 bits (73), Expect = 0.23
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +2
Query: 263 VYKKLTGREVTFEFPE 310
VYKKLTG++V FEFPE
Sbjct: 176 VYKKLTGKDVNFEFPE 191
>AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7
variant protein.
Length = 78
Score = 93.5 bits (222), Expect = 2e-19
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = +3
Query: 93 SRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 248
SRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV
Sbjct: 10 SRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 61
>BC013983-1|AAH13983.1| 433|Homo sapiens sparc/osteonectin, cwcv
and kazal-like domains proteoglycan (testican) 3
protein.
Length = 433
Score = 28.3 bits (60), Expect = 8.7
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +3
Query: 45 KPSHKTRVANKQK----RP-RSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVH 209
K H++ NK+ RP RSR TS+ + L + + + LD S+L ++
Sbjct: 215 KALHESGSQNKKTKTLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIY 274
Query: 210 LDKNQQTT 233
LDKN+Q T
Sbjct: 275 LDKNEQCT 282
>BC003017-1|AAH03017.1| 433|Homo sapiens sparc/osteonectin, cwcv
and kazal-like domains proteoglycan (testican) 3
protein.
Length = 433
Score = 28.3 bits (60), Expect = 8.7
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +3
Query: 45 KPSHKTRVANKQK----RP-RSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVH 209
K H++ NK+ RP RSR TS+ + L + + + LD S+L ++
Sbjct: 215 KALHESGSQNKKTKTLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIY 274
Query: 210 LDKNQQTT 233
LDKN+Q T
Sbjct: 275 LDKNEQCT 282
>BC000460-1|AAH00460.1| 433|Homo sapiens sparc/osteonectin, cwcv
and kazal-like domains proteoglycan (testican) 3
protein.
Length = 433
Score = 28.3 bits (60), Expect = 8.7
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +3
Query: 45 KPSHKTRVANKQK----RP-RSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVH 209
K H++ NK+ RP RSR TS+ + L + + + LD S+L ++
Sbjct: 215 KALHESGSQNKKTKTLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIY 274
Query: 210 LDKNQQTT 233
LDKN+Q T
Sbjct: 275 LDKNEQCT 282
>AY358973-1|AAQ89332.1| 436|Homo sapiens HSAJ1454 protein.
Length = 436
Score = 28.3 bits (60), Expect = 8.7
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +3
Query: 45 KPSHKTRVANKQK----RP-RSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVH 209
K H++ NK+ RP RSR TS+ + L + + + LD S+L ++
Sbjct: 218 KALHESGSQNKKTKTLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIY 277
Query: 210 LDKNQQTT 233
LDKN+Q T
Sbjct: 278 LDKNEQCT 285
>AJ001454-1|CAA04775.1| 436|Homo sapiens testican-3 protein.
Length = 436
Score = 28.3 bits (60), Expect = 8.7
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +3
Query: 45 KPSHKTRVANKQK----RP-RSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVH 209
K H++ NK+ RP RSR TS+ + L + + + LD S+L ++
Sbjct: 218 KALHESGSQNKKTKTLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIY 277
Query: 210 LDKNQQTT 233
LDKN+Q T
Sbjct: 278 LDKNEQCT 285
>AB056866-1|BAB64908.1| 313|Homo sapiens testican 3 splicing
variant protein.
Length = 313
Score = 28.3 bits (60), Expect = 8.7
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +3
Query: 45 KPSHKTRVANKQK----RP-RSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVH 209
K H++ NK+ RP RSR TS+ + L + + + LD S+L ++
Sbjct: 215 KALHESGSQNKKTKTLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIY 274
Query: 210 LDKNQQTT 233
LDKN+Q T
Sbjct: 275 LDKNEQCT 282
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,096,368
Number of Sequences: 237096
Number of extensions: 993036
Number of successful extensions: 5903
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5903
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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