Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10399
(600 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U83493-1|AAC47652.1| 732|Drosophila melanogaster MCM5 homolog p... 152 4e-37
AY071628-1|AAL49250.1| 733|Drosophila melanogaster RE67590p pro... 152 4e-37
AE014297-1202|AAF54557.1| 733|Drosophila melanogaster CG4082-PA... 152 4e-37
L42762-1|AAB36617.1| 887|Drosophila melanogaster DNA replicatio... 30 2.1
AY069702-1|AAL39847.1| 887|Drosophila melanogaster LD47441p pro... 30 2.1
AE014297-720|AAF54207.1| 887|Drosophila melanogaster CG7538-PA ... 30 2.1
AY052102-1|AAK93526.1| 548|Drosophila melanogaster SD04977p pro... 30 2.8
AF124744-1|AAD32858.1| 817|Drosophila melanogaster DNA replicat... 30 2.8
AE014298-920|AAF46184.1| 817|Drosophila melanogaster CG4039-PA ... 30 2.8
AB010108-1|BAA34732.1| 817|Drosophila melanogaster MCM6 protein. 30 2.8
>U83493-1|AAC47652.1| 732|Drosophila melanogaster MCM5 homolog
protein.
Length = 732
Score = 152 bits (368), Expect = 4e-37
Identities = 72/86 (83%), Positives = 78/86 (90%)
Frame = +3
Query: 255 EAHVNEALRLFQVSTLDAAMTGSLAGAEGFTTEEDHEMLTRVEKQLKRRFAVGSQVSEQT 434
+ HVNEALRLFQVSTLDAAMTGSLAGAEGFTTEED E L R+EKQLKRRFA+GSQVSEQ
Sbjct: 632 DEHVNEALRLFQVSTLDAAMTGSLAGAEGFTTEEDQETLNRIEKQLKRRFAIGSQVSEQN 691
Query: 435 IIQDFLRQKYPERAILKVIHMMIRRG 512
I+QDFLRQKY ER ++KVIH MIRRG
Sbjct: 692 ILQDFLRQKYEERTVMKVIHTMIRRG 717
Score = 83.4 bits (197), Expect = 2e-16
Identities = 43/84 (51%), Positives = 54/84 (64%)
Frame = +1
Query: 4 AAGELPLTTLRRYSAYXXXXXXXXXXXXXXXXXXXXYVLMRTGALQHERQADKRLYIPIT 183
A GE+ L+T ++Y Y YVLMR+GA Q E+ +DKRL IPIT
Sbjct: 548 AEGEISLSTFKKYIHYCRTHCGPRLSEAAGEKLKSRYVLMRSGAGQQEKASDKRLSIPIT 607
Query: 184 VRQLEAIVHISESLAKMQLQPFAT 255
VRQLEA++ ISESLAK++LQPFAT
Sbjct: 608 VRQLEAVIRISESLAKIRLQPFAT 631
Score = 33.5 bits (73), Expect = 0.22
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +2
Query: 509 GELQHRLQRKMLYRL 553
GELQHR+QRKMLYR+
Sbjct: 717 GELQHRMQRKMLYRI 731
>AY071628-1|AAL49250.1| 733|Drosophila melanogaster RE67590p
protein.
Length = 733
Score = 152 bits (368), Expect = 4e-37
Identities = 72/86 (83%), Positives = 78/86 (90%)
Frame = +3
Query: 255 EAHVNEALRLFQVSTLDAAMTGSLAGAEGFTTEEDHEMLTRVEKQLKRRFAVGSQVSEQT 434
+ HVNEALRLFQVSTLDAAMTGSLAGAEGFTTEED E L R+EKQLKRRFA+GSQVSEQ
Sbjct: 633 DEHVNEALRLFQVSTLDAAMTGSLAGAEGFTTEEDQETLNRIEKQLKRRFAIGSQVSEQN 692
Query: 435 IIQDFLRQKYPERAILKVIHMMIRRG 512
I+QDFLRQKY ER ++KVIH MIRRG
Sbjct: 693 ILQDFLRQKYEERTVMKVIHTMIRRG 718
Score = 83.4 bits (197), Expect = 2e-16
Identities = 43/84 (51%), Positives = 54/84 (64%)
Frame = +1
Query: 4 AAGELPLTTLRRYSAYXXXXXXXXXXXXXXXXXXXXYVLMRTGALQHERQADKRLYIPIT 183
A GE+ L+T ++Y Y YVLMR+GA Q E+ +DKRL IPIT
Sbjct: 549 AEGEISLSTFKKYIHYCRTHCGPRLSEAAGEKLKSRYVLMRSGAGQQEKASDKRLSIPIT 608
Query: 184 VRQLEAIVHISESLAKMQLQPFAT 255
VRQLEA++ ISESLAK++LQPFAT
Sbjct: 609 VRQLEAVIRISESLAKIRLQPFAT 632
Score = 33.5 bits (73), Expect = 0.22
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +2
Query: 509 GELQHRLQRKMLYRL 553
GELQHR+QRKMLYR+
Sbjct: 718 GELQHRMQRKMLYRI 732
>AE014297-1202|AAF54557.1| 733|Drosophila melanogaster CG4082-PA
protein.
Length = 733
Score = 152 bits (368), Expect = 4e-37
Identities = 72/86 (83%), Positives = 78/86 (90%)
Frame = +3
Query: 255 EAHVNEALRLFQVSTLDAAMTGSLAGAEGFTTEEDHEMLTRVEKQLKRRFAVGSQVSEQT 434
+ HVNEALRLFQVSTLDAAMTGSLAGAEGFTTEED E L R+EKQLKRRFA+GSQVSEQ
Sbjct: 633 DEHVNEALRLFQVSTLDAAMTGSLAGAEGFTTEEDQETLNRIEKQLKRRFAIGSQVSEQN 692
Query: 435 IIQDFLRQKYPERAILKVIHMMIRRG 512
I+QDFLRQKY ER ++KVIH MIRRG
Sbjct: 693 ILQDFLRQKYEERTVMKVIHTMIRRG 718
Score = 83.4 bits (197), Expect = 2e-16
Identities = 43/84 (51%), Positives = 54/84 (64%)
Frame = +1
Query: 4 AAGELPLTTLRRYSAYXXXXXXXXXXXXXXXXXXXXYVLMRTGALQHERQADKRLYIPIT 183
A GE+ L+T ++Y Y YVLMR+GA Q E+ +DKRL IPIT
Sbjct: 549 AEGEISLSTFKKYIHYCRTHCGPRLSEAAGEKLKSRYVLMRSGAGQQEKASDKRLSIPIT 608
Query: 184 VRQLEAIVHISESLAKMQLQPFAT 255
VRQLEA++ ISESLAK++LQPFAT
Sbjct: 609 VRQLEAVIRISESLAKIRLQPFAT 632
Score = 33.5 bits (73), Expect = 0.22
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +2
Query: 509 GELQHRLQRKMLYRL 553
GELQHR+QRKMLYR+
Sbjct: 718 GELQHRMQRKMLYRI 732
>L42762-1|AAB36617.1| 887|Drosophila melanogaster DNA replication
licensing factor protein.
Length = 887
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/24 (45%), Positives = 20/24 (83%)
Frame = +1
Query: 172 IPITVRQLEAIVHISESLAKMQLQ 243
+PITVR +E+++ +SE+ A+M L+
Sbjct: 737 LPITVRHIESVIRMSEAHARMHLR 760
>AY069702-1|AAL39847.1| 887|Drosophila melanogaster LD47441p
protein.
Length = 887
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/24 (45%), Positives = 20/24 (83%)
Frame = +1
Query: 172 IPITVRQLEAIVHISESLAKMQLQ 243
+PITVR +E+++ +SE+ A+M L+
Sbjct: 737 LPITVRHIESVIRMSEAHARMHLR 760
>AE014297-720|AAF54207.1| 887|Drosophila melanogaster CG7538-PA
protein.
Length = 887
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/24 (45%), Positives = 20/24 (83%)
Frame = +1
Query: 172 IPITVRQLEAIVHISESLAKMQLQ 243
+PITVR +E+++ +SE+ A+M L+
Sbjct: 737 LPITVRHIESVIRMSEAHARMHLR 760
>AY052102-1|AAK93526.1| 548|Drosophila melanogaster SD04977p
protein.
Length = 548
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/20 (55%), Positives = 19/20 (95%)
Frame = +1
Query: 178 ITVRQLEAIVHISESLAKMQ 237
ITVRQLE+++ +SE++AK++
Sbjct: 339 ITVRQLESMIRLSEAMAKLE 358
>AF124744-1|AAD32858.1| 817|Drosophila melanogaster DNA replication
factor MCM6 protein.
Length = 817
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/20 (55%), Positives = 19/20 (95%)
Frame = +1
Query: 178 ITVRQLEAIVHISESLAKMQ 237
ITVRQLE+++ +SE++AK++
Sbjct: 608 ITVRQLESMIRLSEAMAKLE 627
>AE014298-920|AAF46184.1| 817|Drosophila melanogaster CG4039-PA
protein.
Length = 817
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/20 (55%), Positives = 19/20 (95%)
Frame = +1
Query: 178 ITVRQLEAIVHISESLAKMQ 237
ITVRQLE+++ +SE++AK++
Sbjct: 608 ITVRQLESMIRLSEAMAKLE 627
>AB010108-1|BAA34732.1| 817|Drosophila melanogaster MCM6 protein.
Length = 817
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/20 (55%), Positives = 19/20 (95%)
Frame = +1
Query: 178 ITVRQLEAIVHISESLAKMQ 237
ITVRQLE+++ +SE++AK++
Sbjct: 608 ITVRQLESMIRLSEAMAKLE 627
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,376,968
Number of Sequences: 53049
Number of extensions: 312397
Number of successful extensions: 908
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -