Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10398
(673 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 46 2e-05
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 42 6e-04
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.030
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 36 0.039
SB_17803| Best HMM Match : SRCR (HMM E-Value=0) 35 0.052
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.052
SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.069
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.091
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.21
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.21
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.21
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.37
SB_20293| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 31 0.64
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 30 2.0
SB_40923| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.29) 30 2.0
SB_34070| Best HMM Match : Mucin (HMM E-Value=5.8) 30 2.0
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 29 2.6
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 29 2.6
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_38351| Best HMM Match : PSI (HMM E-Value=0.046) 29 3.4
SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 29 4.5
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_47334| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 29 4.5
SB_20075| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_56918| Best HMM Match : zf-CCHC (HMM E-Value=7.4e-07) 28 6.0
SB_38846| Best HMM Match : Cache (HMM E-Value=2.7e-09) 28 6.0
SB_12390| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 28 6.0
SB_46816| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_34008| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_30225| Best HMM Match : Peptidase_S8 (HMM E-Value=0.0034) 28 7.9
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 28 7.9
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 47.6 bits (108), Expect = 9e-06
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = -3
Query: 194 YAVIRAHRHPDYKPPSKY-NDIALLELDRQVPLDQYTVPACL--HTGDAVNDERASATGW 24
+ + R HP+Y P +Y NDIALL LDR LD+YT ACL + + R +GW
Sbjct: 319 FRIQRIFMHPNYHSPVQYANDIALLLLDRPARLDRYTNLACLAPRSSPLPDGTRCWISGW 378
Query: 23 GLTENRG 3
G + G
Sbjct: 379 GRLSSGG 385
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Frame = -3
Query: 194 YAVIRAHRHPDY-KPPSKYNDIALLELDRQVPLDQYTVPACL-HTGDAVNDER-ASATGW 24
++V R HP Y +P + NDIAL++L++ L++Y ACL G+ ++D + ATGW
Sbjct: 425 FSVARIIVHPQYFEPTAINNDIALIKLNKPARLNKYVNLACLPRQGEELSDGKICYATGW 484
Query: 23 GLT 15
GLT
Sbjct: 485 GLT 487
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/71 (39%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = -3
Query: 209 EPVPPYAVIRAHRHPDYKPPSKYNDIALLELDRQVPLDQ--YTVPACLHTGDAVNDERAS 36
E +P VI HP+Y NDIALLEL R V D+ ACL +R
Sbjct: 150 ESIPVSHVIE---HPEYDDRKIKNDIALLELSRPVKFDREGKVGTACLTNQQPTPGKRCY 206
Query: 35 ATGWGLTENRG 3
TGWG T G
Sbjct: 207 ITGWGSTIGTG 217
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -3
Query: 188 VIRAHRHPDYKPPSKYNDIALLELDRQVPLDQYTVPACLHTGDAVNDERASATGWGLTEN 9
V R +RH + + +DIALLEL+R ++ ACL +G+ GWG ++
Sbjct: 397 VRRVYRHRGFSMANYVDDIALLELERSAVINDKVSTACLPSGEPKVGAICYIAGWGRLQS 456
Query: 8 RG 3
G
Sbjct: 457 LG 458
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/62 (37%), Positives = 27/62 (43%)
Frame = -3
Query: 188 VIRAHRHPDYKPPSKYNDIALLELDRQVPLDQYTVPACLHTGDAVNDERASATGWGLTEN 9
V R H +Y + D ALL+L R + QY P CL D TGWG T
Sbjct: 371 VERIISHANYSYNTVDYDYALLKLTRPLNFTQYVQPVCLPDSDFPAGTLCYVTGWGSTNY 430
Query: 8 RG 3
RG
Sbjct: 431 RG 432
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/62 (37%), Positives = 27/62 (43%)
Frame = -3
Query: 188 VIRAHRHPDYKPPSKYNDIALLELDRQVPLDQYTVPACLHTGDAVNDERASATGWGLTEN 9
V R H +Y + D ALL+L R + QY P CL D TGWG T
Sbjct: 620 VERIISHANYSYNTVDYDYALLKLTRPLNFTQYVQPVCLPDSDFPAGTLCYVTGWGSTNY 679
Query: 8 RG 3
RG
Sbjct: 680 RG 681
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/61 (39%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = -3
Query: 176 HRHPDYKPPSKY-NDIALLELDRQVPLDQYTVPACL--HTGDAVNDERASATGWGLTENR 6
H HPDY P + NDIALL L R L AC+ T N TGWG +
Sbjct: 708 HNHPDYGSPKRSSNDIALLRLSRPTILTHRINLACMPNDTVHFPNGTMCYITGWGTLSSG 767
Query: 5 G 3
G
Sbjct: 768 G 768
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 36.3 bits (80), Expect = 0.022
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -3
Query: 170 HPDYKPPSKYNDIALLELDRQVPLDQYTVPACLHTGDAVNDERASA-TGWG 21
HP Y S +D+A+L+L + + P C+ + V RA A GWG
Sbjct: 1319 HPQYNSSSHEHDLAVLQLQQPAEFNSRVSPICIVANEEVQAGRACAVAGWG 1369
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 35.9 bits (79), Expect = 0.030
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = -3
Query: 215 DHEPVPPYAVIRAHRHPDYKPPSKYNDIALLELDRQVPLDQYTVPACLHTG--DAVNDER 42
+H + P A I + HP + + +DIAL+ L + + +Y P CL G + R
Sbjct: 1237 EHVQIIPSAGI--YSHPRFSWRTYDSDIALIRLRWKANITEYVRPVCLPNGYQRRLVKPR 1294
Query: 41 ASAT--GWGLTENR 6
A GWG+TEN+
Sbjct: 1295 AKGVMLGWGVTENK 1308
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 35.5 bits (78), Expect = 0.039
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = -3
Query: 212 HEPVPPYAVIRAHR---HPDYKPPSKYNDIALLELDRQVPLDQYTVPACL---HTGDAVN 51
+E P Y I+ + +P + NDIALLEL+R V + + P CL + G
Sbjct: 6 YEMSPFYQSIKVKKLVYNPGFNERHYRNDIALLELERPVLTNPHVSPVCLPPVNAGKVPV 65
Query: 50 DERASATGWG 21
+ TGWG
Sbjct: 66 GKNCFITGWG 75
>SB_17803| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1428
Score = 35.1 bits (77), Expect = 0.052
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = -3
Query: 191 AVIRAHRHPDYKPPSKY-NDIALLELDRQVPLDQYTVPACL 72
AV H+HP Y+ P+++ NDIA+L+L R L++ C+
Sbjct: 1167 AVAAIHKHPSYQAPTRWANDIAVLKLARPAILNKRVNVVCM 1207
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 35.1 bits (77), Expect = 0.052
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -3
Query: 188 VIRAHRHPDYKPPSKYNDIALLELDRQVPLDQYTVPACL-HTGDAVNDE-RASATGWG 21
V R RH YK +DIALL L R + +D+ ACL GD N + TGWG
Sbjct: 14 VARVIRHEKYK--RLRHDIALLRLARPLAVDKKVSTACLPQQGDRANPGLKCYITGWG 69
>SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 34.7 bits (76), Expect = 0.069
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Frame = -3
Query: 170 HPDYKP-PSKYNDIALLELDRQVPLDQYTVPACL-HTGDAV--NDERASATGWGLTE 12
HP++K + YNDIAL++L +V L CL H G+A+ + GWG TE
Sbjct: 87 HPNFKSLQTFYNDIALVKLRTRVKLGPSVRTICLPHKGEALLSPGKYGFVAGWGSTE 143
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 34.3 bits (75), Expect = 0.091
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -3
Query: 170 HPDYKPPSKYNDIALLELDRQVPLDQYTVPACL 72
HP Y P S +DIAL+ L + V Y P CL
Sbjct: 199 HPHYSPDSYDSDIALIRLAQPVTFTDYVKPICL 231
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = -3
Query: 188 VIRAHRHPDYKPPSKYN-DIALLELDRQVPLDQYTVPACLH--TGDAVNDERASATGWGL 18
V H H + Y DIA+++L P+ PACL + TGWG+
Sbjct: 360 VTAIHMHTRFMTDGSYGYDIAIMKLANPAPIGHTISPACLPGLYDQVTSGTMCYVTGWGM 419
Query: 17 TE 12
TE
Sbjct: 420 TE 421
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = -3
Query: 188 VIRAHRHPDYKPPSKYNDIALLELDRQVPL 99
V R HP Y P NDIAL+EL VPL
Sbjct: 140 VKRIITHPTYNSPQLSNDIALIELSSPVPL 169
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = -3
Query: 170 HPDY-KPPSKYNDIALLELDRQVPLDQYTVPACL-HTGDAVND-ERASATGWG 21
HP Y KP + +DIALL+L++ ++ CL G A +D TGWG
Sbjct: 193 HPSYGKPVTLAHDIALLKLEKSATVNNNVHTVCLPFNGPAPSDCTHCWITGWG 245
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 10/61 (16%)
Frame = -3
Query: 173 RHPDYKP--------PSKYNDIALLELDRQVPLDQYTVPACLHTGDAVNDERAS--ATGW 24
RHP YK P Y D+AL++L++ V TVP CL D D + GW
Sbjct: 113 RHPQYKSNIASLESGPCDY-DVALVKLEKSVATTPKTVPICLVPRDTPRDLKRDCYVAGW 171
Query: 23 G 21
G
Sbjct: 172 G 172
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -3
Query: 170 HPDYKPPSKYNDIALLELDRQVPLDQYTVPACL 72
HP Y P NDIAL+EL L P CL
Sbjct: 555 HPQYNNPRLSNDIALIELASPAKLSSRVNPVCL 587
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -3
Query: 215 DHEPVPPYAVIRAHRHPDYKPPSKY-NDIALLELDRQVPLDQYTVPACL 72
D+ +++ R HP Y P++Y +DIAL+EL + +++ ACL
Sbjct: 203 DYGTEQDFSLSRVITHPSYHKPTRYAHDIALIELAKPAVINKAVGLACL 251
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = -3
Query: 188 VIRAHRHPDYKP-PSKYN-DIALLELDRQVPLDQYTVPACLHTGDAVNDERASA--TGWG 21
+ + + H DY P +YN D+AL+ L + +Y P CL G TGWG
Sbjct: 289 IAKIYLHADYNLYPHQYNNDVALIRLAKPAIRTRYVQPVCLADGTVSFPPGTECWITGWG 348
Query: 20 LTENRG 3
+ G
Sbjct: 349 RLHSGG 354
>SB_20293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1821
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = -3
Query: 272 IVKQKHLNLVPNSAPRPARDHEPVPPYAVIRAHRHPDYKPPSKYNDIALLELDRQVPLDQ 93
++ + NL+ SA + R PVP ++ + + P + + +++ +PL +
Sbjct: 1078 VMSNQRNNLLSKSAIQALRLLVPVPEVNIMEKVPNFSEESPKLFKGLGMMKEPYMIPLKE 1137
Query: 92 YTVPACLHT 66
VP CL+T
Sbjct: 1138 DAVPVCLYT 1146
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 31.9 bits (69), Expect = 0.48
Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = -3
Query: 170 HPDYKPPSKYNDIALLELDRQVPLDQ--YTVPACLHTGDAVNDERASATGWG 21
HP Y NDIALLEL V D CL +R TGWG
Sbjct: 514 HPKYNDRRIVNDIALLELATPVQFDSAGKVGTVCLTDQRPAPGKRCYITGWG 565
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 31.5 bits (68), Expect = 0.64
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = -3
Query: 170 HPDYKPPSKYNDIALLELDRQVPLDQYTVPACL-HTGDAVN----DERASATGWGLTENR 6
HP + D+AL++LD + + +Y P CL T D + + A GWG T R
Sbjct: 191 HPQFDHVLFDADLALIKLDGEAIISEYVRPICLPETDDQASLISPSKFGMAVGWGKTVGR 250
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -3
Query: 194 YAVIRAHRHPDYKPPSKYN-DIALLELDRQV 105
Y V + HP Y P Y+ DIALL+LD+ V
Sbjct: 81 YIVTKVITHPSYHKPKTYSHDIALLKLDKPV 111
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 140 NDIALLELDRQVPLDQYTVPACLHTGDAVNDERASATG 27
ND+AL++L R V L ACL TG+ + TG
Sbjct: 594 NDVALIQLARPVTLGSKVNTACLPTGEIAVGSKCYITG 631
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Frame = -3
Query: 230 PRPARDHE------PVPPYAVIRAHRHPDYKPPSKYNDIALLELDRQVPLDQYTVPACL- 72
PRP+ +H + V + HP+Y+ + +D+ALL L L++ CL
Sbjct: 1385 PRPSGEHNLRRGDGTEQDFTVRQVIVHPNYRRQTTDSDVALLRLSHPATLNKAVSLICLP 1444
Query: 71 HTGDA-VNDERASATGWGLT 15
G++ + TGWG T
Sbjct: 1445 KEGESEAVGKNCYITGWGRT 1464
>SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -3
Query: 311 PLHYR*QRDIIKAIVKQKHLNLVPNSAPRPARDHEPVPPYAVIRAHRHPDYKPP 150
PLH R ++ + ++H+ L P P ++H +PP ++ H H + PP
Sbjct: 866 PLHLREHVELPPPLHLKEHVELPP---PLHLKEHVELPPPLHLKEHGHVELPPP 916
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = -3
Query: 194 YAVIRAHRHPDYKPPSKYN-DIALLELDRQVPLDQYTVPACL--HTGDAVNDERASATGW 24
+ V H H + Y DIALL+L R ++++ CL A+ TGW
Sbjct: 118 FDVSTLHLHQRFLTDKGYGYDIALLKLSRPAVINEFVRTVCLPAQGSRALEGTMCFITGW 177
Query: 23 GLT 15
G T
Sbjct: 178 GKT 180
>SB_40923| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.29)
Length = 690
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 249 PGAEFGTSPGTRPRTRPAVRSHPRSQTP 166
PG +F +P RP+T P+V + PR P
Sbjct: 192 PGKKFQMTPVERPKTAPSVTAVPRQPRP 219
>SB_34070| Best HMM Match : Mucin (HMM E-Value=5.8)
Length = 541
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -2
Query: 297 LTKRHY*GDCETKTFEPGAEFGTSPGTRPRTRPAVRSHPRSQT 169
+T+R+ G + P T P TRP+TRP R R +T
Sbjct: 226 VTRRYLTGRRRGRVTRPKTRPKTRPKTRPKTRPKTRPKTRPKT 268
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 231 TSPGTRPRTRPAVRSHPRSQT 169
T P TRP+TRP +S +S+T
Sbjct: 284 TRPKTRPKTRPKTKSKSKSKT 304
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -3
Query: 188 VIRAHRHPDYKPPSKYNDIALLELDRQVPLDQYTVPACLHT-GDAVN-DERASATGWG 21
V R +H + +DIALL+L+R L+ ACL + GD + TGWG
Sbjct: 17 VKRIFKHSGFSMWRYRDDIALLQLERPAQLNDRVNVACLPSPGDVPPVGSKCWLTGWG 74
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = -3
Query: 194 YAVIRAHRHPDYKPPSKYNDIALLELDRQVPLDQYTVPACL--HTGDAVNDERASATGWG 21
+ + + +H D+ ND+ALL+LD + CL A + TGWG
Sbjct: 144 FRLTKLFKHKDFSMSHLKNDVALLKLDNPIQPSDKVNTVCLPERNSRAQVGAQCFITGWG 203
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Frame = -3
Query: 173 RHPDYKPPSKYNDIALLELDRQVPLDQYTVPACLHTGD--AVNDERASATGWGLTENRG 3
+H + NDIALL+L V CL + A R TGWG T G
Sbjct: 109 KHEQFSMRHLKNDIALLQLHEPVKASDKVNTVCLPSSGSRAQAGARCYITGWGRTVGGG 167
>SB_38351| Best HMM Match : PSI (HMM E-Value=0.046)
Length = 236
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = -3
Query: 263 QKHLNLVPNSAPRPARDHEPVPPYAVIRAHRH----PDYKPPSKYN--DIALLELDR 111
Q ++ P AP + P PPY A + P Y PP +YN D +LE+ R
Sbjct: 155 QPAVDFKPGVAPPTVNANAPYPPYNQQAAPPYPAYNPQYLPPGEYNPADWRILEIRR 211
>SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -3
Query: 140 NDIALLELDRQVPLDQYTVPACL-HTGDAVN-DERASATGWG 21
NDIAL++L ++V + P CL G V + TGWG
Sbjct: 206 NDIALIQLKKRVRRSRLVRPICLPRVGQEVEIGTKCYMTGWG 247
>SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1277
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 398 LQNYGFPSITWIIWACFTMA 339
L+ YGF W I+ACFT+A
Sbjct: 199 LRTYGFIEPYWFIFACFTLA 218
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = -3
Query: 170 HPDYKPPSKYNDIALLELDRQV-PLDQYTVPACLHTG---DAVNDERASATGWG 21
HPDY ND+AL+ L + ++ P CL T D + TG+G
Sbjct: 521 HPDYHEIKLTNDLALIRLRTPITTFTKHVRPVCLPTSATPDLAVGTNCTVTGYG 574
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 194 YAVIRAHRHPDYKPPSKY-NDIALLELDRQVPLDQYTVPACL 72
+ V R +HP Y Y ND+ALL+L R + + CL
Sbjct: 132 FHVRRIIKHPHYSRDVPYDNDVALLQLSRPAFVTSFVNTVCL 173
>SB_47334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 572 YRYFFCIES*HYSNTF*NPCVWIIKL 649
Y + + HYSN+F NP +++IK+
Sbjct: 218 YNTIYAFKLLHYSNSFVNPIIFVIKM 243
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -3
Query: 134 IALLELDRQVPLDQYTVPACLHTG--DAVNDERASATGWGLTENRG 3
I LL L + LD+Y P CL + + TGWG TE G
Sbjct: 141 ITLLRLAKPAKLDEYVSPICLLPDGFEFPWAKECYITGWGKTEFEG 186
>SB_20075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +2
Query: 191 RTAGRVRGLVPGEVPNSAPGSNVFVSQSP**CLFVSGNAKVSLSEPIC 334
R R G VPG VP S PG+N + P C F G+ V S P+C
Sbjct: 30 RELSRKVGSVPGIVPGSVPGTNP-SGKCPGKCPFQLGS--VPGSGPLC 74
>SB_56918| Best HMM Match : zf-CCHC (HMM E-Value=7.4e-07)
Length = 517
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = -3
Query: 272 IVKQKHLNLVPNSAPRPARDHEPVPPYAVIRAHRHPDYKP--PSKYNDIALLELDRQVPL 99
++K + NL+ SA + R +P AV P++K P + + L++ ++PL
Sbjct: 265 VMKNQSKNLLSKSAIQALR--LLIPSAAVHNVETAPNFKAEFPKLFKGLGLMKDKYKIPL 322
Query: 98 DQYTVPACLHT 66
V CL+T
Sbjct: 323 KPDAVSVCLYT 333
>SB_38846| Best HMM Match : Cache (HMM E-Value=2.7e-09)
Length = 916
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Frame = -3
Query: 287 DIIKAIVKQKHLNLVPNSAPRPARDHEPVPPYAVIRAHRH----PDYKPPSKYN 138
D+ A Q ++ P AP + P PPY A + P Y PP +YN
Sbjct: 859 DVSSAPPIQPAVDFKPGVAPPTVNANAPYPPYNQQAAPPYPAYNPQYLPPGEYN 912
>SB_12390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 868
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 249 PGAEFGTSPGTRPRTRP 199
PGA G PG RPR RP
Sbjct: 190 PGARPGARPGARPRVRP 206
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -3
Query: 203 VPPYAVIRAHRHPDYKPPSKY-NDIALLELDRQVPLDQYTVPACLHT 66
V + V R +H Y P NDIA++EL+ L++ ACL T
Sbjct: 92 VQDFRVKRIIKHERYSNPVNLANDIAVIELEEPARLNRAVNLACLPT 138
>SB_46816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1165
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = -3
Query: 272 IVKQKHLNLVPNSAPRPARDHEPVPPYAVIRAHRHPDYKP--PSKYNDIALLELDRQVPL 99
++K + NL+ SA + R +P AV P++K P + + L++ ++PL
Sbjct: 401 VMKNQSKNLLSKSAIQALR--LLIPSAAVHNVETAPNFKAEFPKLFKGLGLMKDKYKIPL 458
Query: 98 DQYTVPACLHT 66
V CL+T
Sbjct: 459 KPDAVSVCLYT 469
>SB_34008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -3
Query: 269 VKQKHLNLVP--NSAPRPARDHEPVPPYAVIRAHRHPDYKPP 150
V +K + +P ++PRP + P PP R + DY+PP
Sbjct: 258 VSEKPVQAIPLDRASPRPTPSNSPAPPGMANRMTQ--DYRPP 297
>SB_30225| Best HMM Match : Peptidase_S8 (HMM E-Value=0.0034)
Length = 605
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -3
Query: 236 SAPRPARDHEPVPPYAVIRAHRHPDYKPPSKYNDIALLELDRQVPL 99
+AP P + PVPP A+ A P Y+ P+ + +A + ++ PL
Sbjct: 397 TAPAPVVYNPPVPPKALPAA--APHYEKPADQSTVAQVPVEVTAPL 440
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Frame = -3
Query: 182 RAHRHPDYK----PPSKYNDIALLELDRQVPLDQYTVPACLHTGDA--VNDERASATGWG 21
R H HP + Y DIALL L + + P CL D + TGWG
Sbjct: 61 RIHLHPGFVIGGVSHPGYYDIALLHLAKPIQFSDRIQPICLPQDDTEFPAGKMCYLTGWG 120
Query: 20 LT 15
T
Sbjct: 121 ET 122
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,727,080
Number of Sequences: 59808
Number of extensions: 400068
Number of successful extensions: 1508
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1494
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1721264831
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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