Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10395
         (832 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       25   0.74 
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   9.1  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   9.1  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   9.1  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.1  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.1  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 25.0 bits (52), Expect = 0.74
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 121 SCDISFRVQQSTEPHWDILQPLSSDCICHLGQL 23
           SCD+  + + S  PH   L P+  D   H+G L
Sbjct: 171 SCDLCQKTKSSNRPHQGPLTPILYD---HIGDL 200


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 83  ATLGHSATS*QRLHLPPRPAV 21
           A++ H+A +   LH PP P V
Sbjct: 148 ASIFHAAATSLPLHYPPPPPV 168


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 73  PSVARWTAEP*SLYHSYP 126
           P   +W + P S+Y+ YP
Sbjct: 264 PVYNQWWSGPLSMYYQYP 281


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 124 GSCDISFRVQQSTEPH 77
           GSCD S  ++Q   PH
Sbjct: 48  GSCDPSVGLRQGIPPH 63


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 226 FSLSILSWCSGVG 188
           +SL ++SW  G+G
Sbjct: 179 YSLCVISWAVGIG 191


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 226 FSLSILSWCSGVG 188
           +SL ++SW  G+G
Sbjct: 179 YSLCVISWAVGIG 191


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,352
Number of Sequences: 336
Number of extensions: 3715
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)