Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10391
(602 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 159 6e-38
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 149 5e-35
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 145 8e-34
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 124 2e-27
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 122 7e-27
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 116 4e-25
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 107 3e-22
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 104 1e-21
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 100 2e-20
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 92 1e-17
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 90 3e-17
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 87 2e-16
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 80 3e-14
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 79 8e-14
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 77 3e-13
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 74 2e-12
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 73 5e-12
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 73 7e-12
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 72 1e-11
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 71 2e-11
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 69 6e-11
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 69 6e-11
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 66 8e-10
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 66 8e-10
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 64 3e-09
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 64 3e-09
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 62 1e-08
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 61 2e-08
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 60 3e-08
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 59 9e-08
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 58 2e-07
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 58 2e-07
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 55 1e-06
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 55 1e-06
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 54 2e-06
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 52 8e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 51 2e-05
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 51 2e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 50 4e-05
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 50 4e-05
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 50 6e-05
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 48 1e-04
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 48 2e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 3e-04
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 47 4e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 46 5e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 7e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 45 0.001
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 45 0.002
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 45 0.002
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 44 0.004
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 43 0.005
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 43 0.005
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 42 0.011
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 42 0.011
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 42 0.011
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.020
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 41 0.026
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 40 0.034
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 39 0.079
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 39 0.10
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 38 0.18
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.24
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 38 0.24
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 37 0.32
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.32
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 36 0.56
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 36 0.74
UniRef50_A6L7U4 Cluster: Putative cell surface protein; n=1; Bac... 36 0.97
UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma g... 36 0.97
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 1.7
UniRef50_Q7YN71 Cluster: Ribosomal protein S5; n=1; Eimeria tene... 34 2.3
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 34 2.3
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 33 3.9
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.2
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 33 6.9
UniRef50_Q5FR17 Cluster: GTP-binding protein; n=1; Gluconobacter... 32 9.1
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 32 9.1
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 159 bits (385), Expect = 6e-38
Identities = 78/89 (87%), Positives = 81/89 (91%)
Frame = +1
Query: 241 KNRQTESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 420
K + E IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 421 NGHIGLGVKCSKEVATAIRGAIILAKLSV 507
NGH+GLGVKCSKEVATAIRGAIILAKLS+
Sbjct: 134 NGHVGLGVKCSKEVATAIRGAIILAKLSI 162
Score = 72.9 bits (171), Expect = 5e-12
Identities = 29/32 (90%), Positives = 31/32 (96%)
Frame = +3
Query: 507 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 602
+PVRRGYWGNKIGKPHTVPCKVTG+CGSV VR
Sbjct: 163 VPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVR 194
Score = 37.5 bits (83), Expect = 0.24
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +2
Query: 182 KEDQKEWVPVTKLGRLVREGKIDKPRAFTCFLYQSKNS 295
K + KEW+PVTKLGRLV++ KI F K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 149 bits (361), Expect = 5e-35
Identities = 74/89 (83%), Positives = 77/89 (86%)
Frame = +1
Query: 241 KNRQTESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 420
K + E IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD
Sbjct: 14 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDY 73
Query: 421 NGHIGLGVKCSKEVATAIRGAIILAKLSV 507
NGH+GL VKCSKEVATAIRGAIILAKLS+
Sbjct: 74 NGHVGLSVKCSKEVATAIRGAIILAKLSI 102
Score = 65.3 bits (152), Expect = 1e-09
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +3
Query: 507 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV 599
+PV RGYWGNKIGKPHTVPCKVTG+C SV V
Sbjct: 103 VPVCRGYWGNKIGKPHTVPCKVTGRCSSVLV 133
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 145 bits (351), Expect = 8e-34
Identities = 68/106 (64%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +1
Query: 241 KNRQTESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 420
K + E IYL+SLPIKE++I+D+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD+
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 421 NGHIGLGVKCSKEVATAIRGAIILAKLSVYQFEE-VTGVTRSESHT 555
+GH+GLG+KC+KEVATAIRGAII+ KLS+ G + HT
Sbjct: 107 DGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPHT 152
Score = 62.9 bits (146), Expect = 6e-09
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = +3
Query: 507 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 602
+P+RRGYWG +G PHTVP KV+GKCGSVTVR
Sbjct: 136 MPIRRGYWGTALGDPHTVPVKVSGKCGSVTVR 167
Score = 41.5 bits (93), Expect = 0.015
Identities = 16/22 (72%), Positives = 21/22 (95%)
Frame = +2
Query: 182 KEDQKEWVPVTKLGRLVREGKI 247
++++KEWVPVTKLGRLV+ GKI
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKI 49
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 124 bits (298), Expect = 2e-27
Identities = 62/106 (58%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
Frame = +1
Query: 241 KNRQTESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 420
K + E I+LFSLPIKE +I++ F+G L DEV+KI PVQKQT AGQR RFKAFV +GD
Sbjct: 64 KIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDC 123
Query: 421 NGHIGLGVKCSKEVATAIRGAIILAKLSVYQFEE-VTGVTRSESHT 555
NGHIGLGVK KEVA +I+G++ILAKL++ G E HT
Sbjct: 124 NGHIGLGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPHT 169
Score = 62.1 bits (144), Expect = 1e-08
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = +3
Query: 507 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 602
+PVRRGYWG+K+G+PHT+P KV GKCGSV VR
Sbjct: 153 VPVRRGYWGSKLGEPHTIPTKVHGKCGSVHVR 184
Score = 35.5 bits (78), Expect = 0.97
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +2
Query: 185 EDQKEWVPVTKLGRLVREGKI 247
+D+ WVP TKLGRLV++GKI
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKI 65
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 122 bits (294), Expect = 7e-27
Identities = 59/84 (70%), Positives = 69/84 (82%)
Frame = +1
Query: 256 ESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 435
E I+L SLP+KEF+IID L P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+G
Sbjct: 54 EEIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVG 112
Query: 436 LGVKCSKEVATAIRGAIILAKLSV 507
LG+K +KEVA AIR II+AKLSV
Sbjct: 113 LGIKTAKEVAGAIRAGIIIAKLSV 136
Score = 58.0 bits (134), Expect = 2e-07
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = +3
Query: 507 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 602
+P+RRGYWG +G+PH++ K TGKCGSVTVR
Sbjct: 137 IPIRRGYWGTNLGQPHSLATKTTGKCGSVTVR 168
Score = 37.1 bits (82), Expect = 0.32
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +2
Query: 188 DQKEWVPVTKLGRLVREGKI 247
++K WVPVTKLGRLV+ GKI
Sbjct: 31 EEKGWVPVTKLGRLVKAGKI 50
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 116 bits (279), Expect = 4e-25
Identities = 56/66 (84%), Positives = 58/66 (87%)
Frame = +1
Query: 241 KNRQTESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 420
K + E IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 49 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 108
Query: 421 NGHIGL 438
NGH+GL
Sbjct: 109 NGHVGL 114
Score = 38.3 bits (85), Expect = 0.14
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +2
Query: 182 KEDQKEWVPVTKLGRLVREGKIDKPRAFTCFLYQSKNS 295
K + KEW+PVTKLGRLV++ KI F K S
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 66
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 107 bits (256), Expect = 3e-22
Identities = 53/59 (89%), Positives = 54/59 (91%)
Frame = +1
Query: 331 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 507
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS+
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSI 106
Score = 64.1 bits (149), Expect = 2e-09
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = +3
Query: 507 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV 599
+P+R+GYWGNKIGKP+TVPCKVTG CGSV V
Sbjct: 107 VPLRQGYWGNKIGKPNTVPCKVTGHCGSVLV 137
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 104 bits (250), Expect = 1e-21
Identities = 51/65 (78%), Positives = 55/65 (84%)
Frame = +1
Query: 241 KNRQTESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 420
K + E IYLFSLPIKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 421 NGHIG 435
NG+ G
Sbjct: 62 NGYAG 66
Score = 36.7 bits (81), Expect = 0.42
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2
Query: 518 KRLLG*QDRKATHRPLQGHRQVWFC 592
+RLLG QDR+A HRPLQG R + C
Sbjct: 94 QRLLGEQDRQAPHRPLQGDRPLRLC 118
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 100 bits (240), Expect = 2e-20
Identities = 48/84 (57%), Positives = 60/84 (71%)
Frame = +1
Query: 256 ESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 435
E I+ FS I+E EI+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G
Sbjct: 40 EQIFKFSHVIREPEIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVG 99
Query: 436 LGVKCSKEVATAIRGAIILAKLSV 507
+G K SKE A+AIRGAI AK ++
Sbjct: 100 IGTKASKEAASAIRGAIARAKCAI 123
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 510 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 602
PVR G W GKPHTV CK +GKCG+ V+
Sbjct: 125 PVRLGLWDGAQGKPHTVSCKGSGKCGTSVVQ 155
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 91.9 bits (218), Expect = 1e-17
Identities = 45/79 (56%), Positives = 61/79 (77%)
Frame = +1
Query: 241 KNRQTESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 420
K + E+I+ FS+PIKE++I+D FL +L +E L I PVQKQT AGQ+TRFKA+V +GD+
Sbjct: 78 KIKSLETIFQFSIPIKEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDS 136
Query: 421 NGHIGLGVKCSKEVATAIR 477
+ HIGLG K +KEV AI+
Sbjct: 137 HQHIGLGWKSAKEVQGAIQ 155
Score = 35.9 bits (79), Expect = 0.74
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +2
Query: 191 QKEWVPVTKLGRLVREGKI 247
++EWVP+TKLGRLV+ GKI
Sbjct: 61 EQEWVPLTKLGRLVKGGKI 79
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 90.2 bits (214), Expect = 3e-17
Identities = 44/52 (84%), Positives = 45/52 (86%)
Frame = +1
Query: 241 KNRQTESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 396
K + E IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 38.3 bits (85), Expect = 0.14
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +2
Query: 182 KEDQKEWVPVTKLGRLVREGKIDKPRAFTCFLYQSKNS 295
K + KEW+PVTKLGRLV++ KI F K S
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 87.4 bits (207), Expect = 2e-16
Identities = 47/109 (43%), Positives = 64/109 (58%)
Frame = +1
Query: 181 QGRPERVGSCHQTRPSCSRRKNRQTESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 360
QG + P K + + +YLFSLPIKEFE+ DF LG L D+VLK+M VQ
Sbjct: 116 QGLAPELSKAASESPQVKDMKMKSLK-VYLFSLPIKEFEVTDFLLGVPLKDKVLKLMFVQ 174
Query: 361 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 507
KQ +AG+R RFK V I D N ++ LGV+ KE+ A+ +L+ + V
Sbjct: 175 KQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELLIAVCRTNVLSIILV 223
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 80.2 bits (189), Expect = 3e-14
Identities = 40/52 (76%), Positives = 42/52 (80%)
Frame = +1
Query: 241 KNRQTESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 396
K + E IYLFSLPIK EIIDFFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 74 KIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 34.3 bits (75), Expect = 2.3
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 182 KEDQKEWVPVTKLGRLVREGKIDKPRAFTCFLYQSKNS 295
K + KEW+P TKLG LV++ KI F K S
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGS 91
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 79.0 bits (186), Expect = 8e-14
Identities = 51/99 (51%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Frame = +1
Query: 262 IYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLG 441
IYLFSLPIKE EIID FLG +L DEVLK +P QK TR GQ +KA GD NGH+ G
Sbjct: 69 IYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDYNGHVITG 122
Query: 442 VKCSKEVATAIRGAIILAKLSVYQ-FEEVTGVTRSESHT 555
+ EVA I+ IIL KL + + G S+ HT
Sbjct: 123 L---DEVANTIQRVIILTKLPIVPVWRGYCGSKTSKPHT 158
Score = 42.3 bits (95), Expect = 0.008
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +3
Query: 507 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV 599
+PV RGY G+K KPHTV CKVTG GSV++
Sbjct: 142 VPVWRGYCGSKTSKPHTVLCKVTGH-GSVSL 171
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 77.0 bits (181), Expect = 3e-13
Identities = 40/84 (47%), Positives = 57/84 (67%)
Frame = -3
Query: 507 NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHDL*NLII 328
N QL +D+S ++G G FLAAL QT++ V V +G++ LE L+GT L L HDL + ++
Sbjct: 40 NGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTLTGTGLLLDGHDLQHFVL 99
Query: 327 QGRAEEEINDLEFFDW*RKQVNAL 256
Q A+EEI+DLE F+ R QV+ L
Sbjct: 100 QRAAQEEIDDLELFNGQRVQVDLL 123
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 74.1 bits (174), Expect = 2e-12
Identities = 39/77 (50%), Positives = 50/77 (64%)
Frame = +1
Query: 262 IYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLG 441
+YLFS PIKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I N ++ LG
Sbjct: 8 VYLFSRPIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLG 67
Query: 442 VKCSKEVATAIRGAIIL 492
V+ KE+ A+ IIL
Sbjct: 68 VERPKELLIAVCRTIIL 84
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 72.9 bits (171), Expect = 5e-12
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = +1
Query: 382 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 507
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSI 102
Score = 61.7 bits (143), Expect = 1e-08
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +3
Query: 507 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 602
LPV RGYWGN+I KPHTVP KVTG+CGSV VR
Sbjct: 103 LPVPRGYWGNEIRKPHTVPGKVTGRCGSVLVR 134
Score = 33.5 bits (73), Expect = 3.9
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 188 DQKEWVPVTKLGRLVREGKI 247
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 72.5 bits (170), Expect = 7e-12
Identities = 38/66 (57%), Positives = 48/66 (72%)
Frame = +1
Query: 277 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSK 456
LP+KEFEI DFFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCSK
Sbjct: 18 LPVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSK 75
Query: 457 EVATAI 474
+V TA+
Sbjct: 76 KVGTAV 81
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 71.7 bits (168), Expect = 1e-11
Identities = 36/77 (46%), Positives = 54/77 (70%)
Frame = +1
Query: 277 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSK 456
LP+ E EI+D L P L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SK
Sbjct: 42 LPLLEPEIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSK 100
Query: 457 EVATAIRGAIILAKLSV 507
EV AIR AI AKLS+
Sbjct: 101 EVGPAIRKAIAHAKLSL 117
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 70.9 bits (166), Expect = 2e-11
Identities = 34/77 (44%), Positives = 53/77 (68%)
Frame = +1
Query: 277 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSK 456
LPI+E EI+D L P L+D+VL + +Q+ T +G+R RF +G+++G++GL + K
Sbjct: 18 LPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKGK 76
Query: 457 EVATAIRGAIILAKLSV 507
EVA+ IR AI AKL++
Sbjct: 77 EVASTIRKAIDKAKLNM 93
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 69.3 bits (162), Expect = 6e-11
Identities = 39/99 (39%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Frame = +1
Query: 277 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSK 456
LP+KE EI+D L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G
Sbjct: 84 LPLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDD 142
Query: 457 EVATAIRGAIILAKLSVYQFEEVTGVTRSE-SHTPSLAR 570
+V AI+ AI +AKL++ + + +G + T SL R
Sbjct: 143 QVGGAIQKAIDVAKLNIIEVDRGSGSWEDQPGGTNSLTR 181
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 69.3 bits (162), Expect = 6e-11
Identities = 32/85 (37%), Positives = 54/85 (63%)
Frame = +1
Query: 277 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSK 456
LP+KE++I+D+ + P L DEV+ I Q+ T +G+R + +G+ NG++G+G +K
Sbjct: 31 LPLKEYQIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAK 89
Query: 457 EVATAIRGAIILAKLSVYQFEEVTG 531
E A AI+ AI AKL++ + + G
Sbjct: 90 EAAPAIKKAIDNAKLNIIEIKRGCG 114
Score = 34.3 bits (75), Expect = 2.3
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +3
Query: 522 GYWGNKIGKPHTVPCKVTGKCGSVTV 599
G W GKPHT+P V GK GSV+V
Sbjct: 114 GSWECGCGKPHTLPFLVNGKSGSVSV 139
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 65.7 bits (153), Expect = 8e-10
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +1
Query: 358 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 501
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 48
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 65.7 bits (153), Expect = 8e-10
Identities = 35/80 (43%), Positives = 54/80 (67%)
Frame = -3
Query: 507 NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHDL*NLII 328
N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+ + L L R D+ N I+
Sbjct: 121 NGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLDRLDVHNFIL 180
Query: 327 QGRAEEEINDLEFFDW*RKQ 268
Q ++ +NDLEF DW R Q
Sbjct: 181 QVW-QQLVNDLEFLDWQRVQ 199
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 63.7 bits (148), Expect = 3e-09
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Frame = +1
Query: 283 IKEFEIIDFFLGPSLN----DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKC 450
IKE EIID L P +N EVL I + T +G+R RF+ A+G+ +G++GLG+
Sbjct: 44 IKEPEIIDVLL-PEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGH 102
Query: 451 SKEVATAIRGAIILAKLSVYQFEEVTG 531
KEV AIR AI AKL++ + + G
Sbjct: 103 GKEVGIAIRKAINYAKLNIIEIKRGCG 129
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 63.7 bits (148), Expect = 3e-09
Identities = 33/77 (42%), Positives = 50/77 (64%)
Frame = +1
Query: 277 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSK 456
LP+KE E++D + P L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG
Sbjct: 33 LPLKESEVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDD 91
Query: 457 EVATAIRGAIILAKLSV 507
+V AI+ AI +AKL++
Sbjct: 92 QVGGAIQKAIDIAKLNI 108
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 62.1 bits (144), Expect = 1e-08
Identities = 33/78 (42%), Positives = 52/78 (66%)
Frame = +1
Query: 274 SLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCS 453
+LPI E EI+D L P L EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +
Sbjct: 38 NLPITEPEIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKA 96
Query: 454 KEVATAIRGAIILAKLSV 507
K++ AI+ AI AK+++
Sbjct: 97 KQLRVAIQKAIRDAKMNI 114
Score = 37.9 bits (84), Expect = 0.18
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +3
Query: 507 LPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTV 599
+PVRRG W G+PH++P KV GK GSV V
Sbjct: 115 IPVRRGCGSWQCTCGEPHSLPFKVVGKAGSVEV 147
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 60.9 bits (141), Expect = 2e-08
Identities = 31/66 (46%), Positives = 42/66 (63%)
Frame = +1
Query: 241 KNRQTESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 420
K + + I+ F + IKE++I+D L L +EV+ I VQKQT G+ R KA VAIGD+
Sbjct: 48 KVKSIDQIFEFGIKIKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDH 106
Query: 421 NGHIGL 438
NGH L
Sbjct: 107 NGHRAL 112
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 60.5 bits (140), Expect = 3e-08
Identities = 37/84 (44%), Positives = 48/84 (57%)
Frame = +1
Query: 256 ESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 435
E I L I+E II L P L EV+ + +QK T GQ TRFKA VA G+ NG++G
Sbjct: 65 EEIIELGLRIQEAGIIKKLL-PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLG 123
Query: 436 LGVKCSKEVATAIRGAIILAKLSV 507
+G SK++ AI A A L+V
Sbjct: 124 IGQGKSKQMRIAIEKATNAAYLNV 147
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 58.8 bits (136), Expect = 9e-08
Identities = 33/68 (48%), Positives = 44/68 (64%)
Frame = +1
Query: 304 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 483
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 484 IILAKLSV 507
IIL + S+
Sbjct: 55 IILDRSSI 62
Score = 34.7 bits (76), Expect = 1.7
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +3
Query: 522 GYWGNKIGKPHTVPCKVTGKCGSVTV 599
G+ GNKI KPHTV C+VT SV V
Sbjct: 68 GWSGNKIAKPHTVSCRVTRLYCSVLV 93
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 58.0 bits (134), Expect = 2e-07
Identities = 43/95 (45%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Frame = +1
Query: 277 LPIKEFEIIDFFLGPSLNDEVLKIM---PVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVK 447
+ IK E I FF S N L P+ KQT Q+TRFKA V +G + GH+ LG+K
Sbjct: 67 MKIKSLEEIYFFSLLSRNLRSLTFSWEHPLIKQTCTDQQTRFKASVTVG-SYGHVSLGIK 125
Query: 448 CSKEVATAIRGAIILAKLSVYQFEEVTGVTRSESH 552
S EVA IILAKLS+ E TG R E H
Sbjct: 126 YSMEVA------IILAKLSIIPVETATGGKRLEPH 154
Score = 37.9 bits (84), Expect = 0.18
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 507 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV 599
+PV G ++ +PH VPC+VTG+CGS+ V
Sbjct: 140 IPVETATGGKRL-EPHMVPCRVTGRCGSLLV 169
Score = 36.7 bits (81), Expect = 0.42
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +2
Query: 191 QKEWVPVTKLGRLVREGKIDKPRAFTCFLYQSKNSRSLISSSARP 325
+ +W+P+TKLG LV+E KI F S+N RSL S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 57.6 bits (133), Expect = 2e-07
Identities = 37/68 (54%), Positives = 42/68 (61%)
Frame = +1
Query: 271 FSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKC 450
FSL K+ II FFL SL DE IMPVQ QT R FK FV+I D + H+ L KC
Sbjct: 83 FSLLNKKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKC 138
Query: 451 SKEVATAI 474
SK+ ATAI
Sbjct: 139 SKKTATAI 146
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 54.8 bits (126), Expect = 1e-06
Identities = 25/61 (40%), Positives = 37/61 (60%)
Frame = +1
Query: 316 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 495
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 496 K 498
K
Sbjct: 128 K 128
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 54.8 bits (126), Expect = 1e-06
Identities = 33/75 (44%), Positives = 45/75 (60%)
Frame = +1
Query: 283 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 462
I+E II L P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++
Sbjct: 55 IQESGIIKKLL-PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQM 113
Query: 463 ATAIRGAIILAKLSV 507
AI A A L+V
Sbjct: 114 RIAIEKANNQALLNV 128
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 54.4 bits (125), Expect = 2e-06
Identities = 24/71 (33%), Positives = 46/71 (64%)
Frame = +1
Query: 295 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 474
++++ G SL +V++ + V + T++G++ + K V +GD +GH+GLGVK S + I
Sbjct: 98 KLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKSSMDSKAGI 157
Query: 475 RGAIILAKLSV 507
+ A+ AKL++
Sbjct: 158 KAALRKAKLAI 168
Score = 39.9 bits (89), Expect = 0.045
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +3
Query: 513 VRRGYWGNKIGKPHTVPCKVTGKCGSVTV 599
+RRGYW + GKP+T+ K +GK GSV V
Sbjct: 171 IRRGYWEIEEGKPNTIKYKTSGKAGSVVV 199
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 52.4 bits (120), Expect = 8e-06
Identities = 27/73 (36%), Positives = 40/73 (54%)
Frame = +1
Query: 319 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 498
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 499 LSVYQFEEVTGVT 537
+ + +TG T
Sbjct: 73 KQLVRI-PITGTT 84
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/76 (35%), Positives = 40/76 (52%)
Frame = +1
Query: 325 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 504
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 505 VYQFEEVTGVTRSESH 552
+ V E H
Sbjct: 72 LISVPIVGTTIPHEIH 87
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 50.8 bits (116), Expect = 2e-05
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +1
Query: 325 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 504
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 505 VYQ 513
+Y+
Sbjct: 138 MYK 140
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 50.0 bits (114), Expect = 4e-05
Identities = 23/68 (33%), Positives = 41/68 (60%)
Frame = +1
Query: 304 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 483
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 484 IILAKLSV 507
++ AK SV
Sbjct: 566 LVDAKKSV 573
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 50.0 bits (114), Expect = 4e-05
Identities = 27/87 (31%), Positives = 46/87 (52%)
Frame = +1
Query: 331 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVY 510
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK ++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 511 QFEEVTGVTRSESHTPSLARSPASVVL 591
+ + G E + R AS VL
Sbjct: 77 EVPVINGTIPHE----VIGRQDASKVL 99
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 49.6 bits (113), Expect = 6e-05
Identities = 24/55 (43%), Positives = 33/55 (60%)
Frame = +1
Query: 322 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 486
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAI 102
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 48.4 bits (110), Expect = 1e-04
Identities = 32/71 (45%), Positives = 38/71 (53%)
Frame = +1
Query: 280 PIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKE 459
P +II+FFLG L DEVL+ M Q QRTR K F + + L V CSKE
Sbjct: 46 PFSSSDIIEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSPMTTL-VNCSKE 99
Query: 460 VATAIRGAIIL 492
V TA + AI L
Sbjct: 100 VGTAAQRAITL 110
Score = 37.9 bits (84), Expect = 0.18
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 522 GYWGNKIGKPHTVPCKVT 575
GY GNKIG PHT+PC VT
Sbjct: 120 GYKGNKIGNPHTIPCDVT 137
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/59 (40%), Positives = 34/59 (57%)
Frame = +1
Query: 331 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 507
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK ++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNI 69
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/61 (31%), Positives = 39/61 (63%)
Frame = +1
Query: 331 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVY 510
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ ++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 511 Q 513
Q
Sbjct: 209 Q 209
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 46.8 bits (106), Expect = 4e-04
Identities = 26/72 (36%), Positives = 36/72 (50%)
Frame = +1
Query: 316 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 495
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 496 KLSVYQFEEVTG 531
K ++ V G
Sbjct: 102 KKHMFSVPRVRG 113
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 46.4 bits (105), Expect = 5e-04
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +1
Query: 310 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 489
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 490 LAK 498
AK
Sbjct: 98 EAK 100
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 7e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 331 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 483
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/56 (37%), Positives = 34/56 (60%)
Frame = +1
Query: 331 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 498
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVAR 74
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +1
Query: 358 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 507
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL++
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNI 121
Score = 34.3 bits (75), Expect = 2.3
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2
Query: 194 KEWVPVTKLGRLVREGKI 247
+EW P TKLGRLV+EGKI
Sbjct: 5 EEWQPKTKLGRLVKEGKI 22
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 44.8 bits (101), Expect = 0.002
Identities = 29/87 (33%), Positives = 44/87 (50%)
Frame = +1
Query: 331 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVY 510
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S +
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 511 QFEEVTGVTRSESHTPSLARSPASVVL 591
+ + G +H P + A VVL
Sbjct: 104 RVPLIGGTI---TH-PVQGEAAAGVVL 126
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 43.6 bits (98), Expect = 0.004
Identities = 18/59 (30%), Positives = 36/59 (61%)
Frame = +1
Query: 331 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 507
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ ++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNI 244
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 43.2 bits (97), Expect = 0.005
Identities = 22/57 (38%), Positives = 33/57 (57%)
Frame = +1
Query: 328 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 498
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAK 87
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 43.2 bits (97), Expect = 0.005
Identities = 23/69 (33%), Positives = 34/69 (49%)
Frame = +1
Query: 325 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 504
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 505 VYQFEEVTG 531
V + V G
Sbjct: 88 VIRVPIVDG 96
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 41.9 bits (94), Expect = 0.011
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1
Query: 316 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 495
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 496 K 498
K
Sbjct: 116 K 116
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 41.9 bits (94), Expect = 0.011
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = +1
Query: 331 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 498
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAK 79
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 41.9 bits (94), Expect = 0.011
Identities = 16/52 (30%), Positives = 32/52 (61%)
Frame = +1
Query: 331 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 486
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ +
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGV 119
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.020
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 325 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 498
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 40.7 bits (91), Expect = 0.026
Identities = 18/23 (78%), Positives = 18/23 (78%)
Frame = +3
Query: 531 GNKIGKPHTVPCKVTGKCGSVTV 599
GNKIGK H V CKVTG CGSV V
Sbjct: 7 GNKIGKTHIVLCKVTGCCGSVLV 29
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 40.3 bits (90), Expect = 0.034
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = +1
Query: 331 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII-----LA 495
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + L
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 496 KLSVYQFEEVTGVTRSESHTPSLARSPAS 582
++ + + +T +T S + PA+
Sbjct: 79 EVPLTKSNSITHITNGVSGGAKVVVRPAA 107
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 39.1 bits (87), Expect = 0.079
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +1
Query: 325 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 504
L ++VL + K + G++ F A + +GD G +G G + E+ AIR A+ +
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIRKGGEAARKN 72
Query: 505 VYQFEEVTG 531
+ E + G
Sbjct: 73 LITIESLEG 81
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 38.7 bits (86), Expect = 0.10
Identities = 27/79 (34%), Positives = 37/79 (46%)
Frame = +1
Query: 241 KNRQTESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 420
K + E + LF P K I F G SL D+++ + + + QRT+
Sbjct: 48 KIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSSQRTK---------- 97
Query: 421 NGHIGLGVKCSKEVATAIR 477
GH GL CS EVATAI+
Sbjct: 98 -GHSGLSSMCSGEVATAIQ 115
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 37.9 bits (84), Expect = 0.18
Identities = 19/69 (27%), Positives = 38/69 (55%)
Frame = +1
Query: 313 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 492
L ++ +++++I + + G+ R+K + +G+ G IGLGV + + AI A I
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGVSKNININKAIISAKIK 153
Query: 493 AKLSVYQFE 519
A ++Y F+
Sbjct: 154 ALNNIYYFK 162
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.24
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 325 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 477
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 37.5 bits (83), Expect = 0.24
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = +1
Query: 325 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 504
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 505 VYQFEEVTG 531
+ + + G
Sbjct: 81 MVRVNLING 89
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 37.1 bits (82), Expect = 0.32
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +2
Query: 182 KEDQKEWVPVTKLGRLVREGKI 247
K + KEW+PVTKLGRLV++ KI
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKI 75
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.32
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -3
Query: 486 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 388
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 36.3 bits (80), Expect = 0.56
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +1
Query: 331 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 486
++++ I V + G+R F A V +GD G +G G + EV AI+ A+
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAV 142
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 35.9 bits (79), Expect = 0.74
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 328 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 477
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
>UniRef50_A6L7U4 Cluster: Putative cell surface protein; n=1;
Bacteroides vulgatus ATCC 8482|Rep: Putative cell
surface protein - Bacteroides vulgatus (strain ATCC 8482
/ DSM 1447 / NCTC 11154)
Length = 943
Score = 35.5 bits (78), Expect = 0.97
Identities = 24/106 (22%), Positives = 46/106 (43%)
Frame = +1
Query: 244 NRQTESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNN 423
N T + F LP+ E+ ++ +G +VLK K A + R+ + + + +
Sbjct: 224 NDVTSKTFYFPLPVAEYPALELSIGNGATSQVLK----TKALDAKRNERYTTTITLDEVS 279
Query: 424 GHIGLGVKCSKEVATAIRGAIILAKLSVYQFEEVTGVTRSESHTPS 561
G + V+ EVA A++ ++ V E V+ + TP+
Sbjct: 280 GSVPTTVESVSEVADALKETNSVSVADVASTETSPTVSIPKKSTPA 325
>UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma
gondii|Rep: Ribosomal protein S5 - Toxoplasma gondii
Length = 268
Score = 35.5 bits (78), Expect = 0.97
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 334 EVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVYQ 513
++++I + K + G+ RFK + IG N IG+GV + AI A A +Y
Sbjct: 134 KIIEIKKISKTKQKGRIRRFKVLLLIGAKNAWIGIGVSKDFYLQEAINKARFFAFKKIYF 193
Query: 514 F 516
F
Sbjct: 194 F 194
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 1.7
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 310 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 474
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_Q7YN71 Cluster: Ribosomal protein S5; n=1; Eimeria
tenella|Rep: Ribosomal protein S5 - Eimeria tenella
Length = 231
Score = 34.3 bits (75), Expect = 2.3
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +1
Query: 307 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKE--VATAIRG 480
+ L ++ ++L I V K G+ ++K + IG+ +G G+G CSK+ + AI
Sbjct: 106 YLLFNTIEQKILLIKKVSKTRAKGRIKKYKIIIIIGNKSGWFGIG--CSKDYYLQDAISK 163
Query: 481 AIILAKLSVYQ 513
A + A ++YQ
Sbjct: 164 ARLHAFKNIYQ 174
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 34.3 bits (75), Expect = 2.3
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 337 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 498
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAAR 73
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 33.5 bits (73), Expect = 3.9
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 200 WVPVTKLGRLVREGKI 247
W PVTKLGRLV++GK+
Sbjct: 35 WTPVTKLGRLVKDGKV 50
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 5.2
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 337 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 483
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 32.7 bits (71), Expect = 6.9
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Frame = -1
Query: 209 QEPTLSGLPCRAHDHGRDHDRVHE-DRRGLYLHRV-----IRIRRENRHVHRLEQRPPL 51
+EPT S CR+ GR H R G HR+ IR R HRL + PP+
Sbjct: 146 REPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPPV 204
>UniRef50_Q5FR17 Cluster: GTP-binding protein; n=1; Gluconobacter
oxydans|Rep: GTP-binding protein - Gluconobacter oxydans
(Gluconobacter suboxydans)
Length = 399
Score = 32.3 bits (70), Expect = 9.1
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Frame = +1
Query: 319 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 498
PS + I+ ++ + F A ++ NGH + + S++ A+ + +
Sbjct: 20 PSAETRITDILKNEQDAQGSNVLSFAALESVSVRNGHAHVSLATSRDNASRVEPLRPRVE 79
Query: 499 LSVYQFEEVTGVTRS-ESH---TPSLARSPA 579
++ +TG T S SH TP+ A +PA
Sbjct: 80 AAIASLPGITGATLSFTSHRPATPAAANAPA 110
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 32.3 bits (70), Expect = 9.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 355 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 495
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLA 369
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,765,217
Number of Sequences: 1657284
Number of extensions: 11134048
Number of successful extensions: 33259
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 31417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33101
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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