Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10390
(737 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160... 104 6e-23
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164... 104 6e-23
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171... 104 6e-23
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 34 0.14
06_01_0349 + 2529279-2530446,2532232-2533036,2533066-2533106,253... 33 0.18
11_01_0033 - 251730-251855,252068-252144,252228-252318,252644-25... 33 0.24
12_01_0032 - 266954-267079,267204-267245,267290-267366,267450-26... 32 0.41
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 31 0.72
11_06_0266 - 21791757-21792982,21793154-21793178 31 0.95
01_01_0703 - 5425713-5425862,5426302-5426451,5426853-5426964,542... 31 1.3
11_01_0355 + 2679561-2680985,2681183-2682295 30 1.7
06_01_0090 - 724296-724532,724756-724938,725038-725088,725520-72... 30 1.7
03_02_0600 - 9748382-9748933,9749805-9749840,9751164-9751218,975... 30 1.7
01_01_1071 - 8446761-8447440,8449334-8450489 29 3.9
11_06_0269 - 21800104-21800655,21800824-21801370,21801398-21801513 29 5.1
11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,223... 29 5.1
06_03_1442 - 30172595-30172606,30172607-30172684,30173034-301734... 29 5.1
06_03_1439 - 30157110-30157121,30157122-30157199,30157549-301579... 29 5.1
06_03_1427 - 30090464-30090475,30090476-30090553,30090903-300913... 29 5.1
06_03_1422 + 30058936-30058975,30059057-30059233,30060848-300610... 29 5.1
06_01_0486 - 3455030-3455770 29 5.1
07_03_0196 + 14995224-14995489,14995859-14995877,14996703-149968... 28 6.7
03_04_0243 + 19298293-19299117 28 6.7
11_06_0271 - 21804629-21805836,21805997-21806015 28 8.9
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 28 8.9
>12_01_0211 -
1601129-1601272,1601670-1602062,1602142-1602240,
1602920-1602988,1603071-1603328
Length = 320
Score = 104 bits (250), Expect = 6e-23
Identities = 50/92 (54%), Positives = 68/92 (73%)
Frame = +2
Query: 248 HQNHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP 427
H ++ N LE L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+ VV+P
Sbjct: 69 HADNTGNKDFLE-LMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVP 127
Query: 428 AHNTGLGPEKTSFFQALSIPTKISKGTLKSST 523
NTGL P +TSFFQ L+IPTKI+KGT++ T
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIIT 159
Score = 96.7 bits (230), Expect = 2e-20
Identities = 45/78 (57%), Positives = 59/78 (75%)
Frame = +1
Query: 499 KGYFEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 678
KG EII V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDSG++F+PE+LD+
Sbjct: 152 KGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTE 211
Query: 679 EDLRAKFQAGVANVAALS 732
EDL KF +GV+ VA++S
Sbjct: 212 EDLMEKFASGVSMVASVS 229
Score = 75.4 bits (177), Expect = 4e-14
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = +3
Query: 63 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 242
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 243 KAIK 254
+ IK
Sbjct: 64 RCIK 67
>11_01_0210 -
1647922-1648065,1648459-1648851,1648930-1649028,
1649706-1649774,1649877-1650134
Length = 320
Score = 104 bits (250), Expect = 6e-23
Identities = 50/92 (54%), Positives = 68/92 (73%)
Frame = +2
Query: 248 HQNHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP 427
H ++ N LE L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+ VV+P
Sbjct: 69 HADNTGNKDFLE-LMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVP 127
Query: 428 AHNTGLGPEKTSFFQALSIPTKISKGTLKSST 523
NTGL P +TSFFQ L+IPTKI+KGT++ T
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIIT 159
Score = 96.7 bits (230), Expect = 2e-20
Identities = 45/78 (57%), Positives = 59/78 (75%)
Frame = +1
Query: 499 KGYFEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 678
KG EII V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDSG++F+PE+LD+
Sbjct: 152 KGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTE 211
Query: 679 EDLRAKFQAGVANVAALS 732
EDL KF +GV+ VA++S
Sbjct: 212 EDLMEKFASGVSMVASVS 229
Score = 75.4 bits (177), Expect = 4e-14
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = +3
Query: 63 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 242
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 243 KAIK 254
+ IK
Sbjct: 64 RCIK 67
>08_01_0215 -
1714224-1714364,1714795-1715187,1715279-1715377,
1716248-1716316,1716408-1716665
Length = 319
Score = 104 bits (250), Expect = 6e-23
Identities = 50/91 (54%), Positives = 67/91 (73%), Gaps = 2/91 (2%)
Frame = +2
Query: 257 HLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPA 430
H DN N +L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+ VV+P
Sbjct: 69 HADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPP 128
Query: 431 HNTGLGPEKTSFFQALSIPTKISKGTLKSST 523
NTGL P +TSFFQ L+IPTKI+KGT++ T
Sbjct: 129 GNTGLDPSQTSFFQVLNIPTKINKGTVEIIT 159
Score = 95.5 bits (227), Expect = 4e-20
Identities = 44/78 (56%), Positives = 59/78 (75%)
Frame = +1
Query: 499 KGYFEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 678
KG EII V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDSG++F+PE+LD+
Sbjct: 152 KGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTE 211
Query: 679 EDLRAKFQAGVANVAALS 732
+DL KF +GV+ VA++S
Sbjct: 212 DDLMEKFASGVSMVASVS 229
Score = 75.4 bits (177), Expect = 4e-14
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = +3
Query: 63 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 242
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 243 KAIK 254
+ IK
Sbjct: 64 RCIK 67
>11_01_0676 -
5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 33.9 bits (74), Expect = 0.14
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Frame = +2
Query: 260 LDNNPALEKL-LPH--IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSV---- 418
L N AL+KL LPH ++GN+GF+ + + ++ D +L++ A P + LS
Sbjct: 396 LGNIAALQKLVLPHNNLEGNMGFLSSLSECRQLEDLILDHNSFVGALPDHLGNLSARLIS 455
Query: 419 VIPAHN--TGLGPEKTSFFQALSI 484
I HN G PEK S +L +
Sbjct: 456 FIADHNKLAGSLPEKMSNLSSLEL 479
>06_01_0349 +
2529279-2530446,2532232-2533036,2533066-2533106,
2533219-2533424
Length = 739
Score = 33.5 bits (73), Expect = 0.18
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +3
Query: 225 KNTMMRKAIKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSRLQLVPVPL 404
K+ MM ++W +QP +R L S + LR+V WR+ +RLQ +P PL
Sbjct: 392 KSCMMAAVQSSSWADLQPELLGLVLTR--LPSLAD-RVRLRAVCRPWRSNARLQPLPPPL 448
Query: 405 P 407
P
Sbjct: 449 P 449
>11_01_0033 -
251730-251855,252068-252144,252228-252318,252644-252704,
252800-252858,252955-253045,253238-253406,253760-253787
Length = 233
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 21 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 200
K R+ TLS+ ++ K I ++ Y ++ DN+ +Q+++ +R L+
Sbjct: 3 KSKRNRPVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLK 62
Query: 201 GSS-IVLMGKNTM 236
SS I L GK M
Sbjct: 63 SSSRIFLAGKKVM 75
>12_01_0032 -
266954-267079,267204-267245,267290-267366,267450-267540,
267864-267924,268021-268079,268176-268266,268481-268698,
268818-268824,269013-269148,270064-270307
Length = 383
Score = 32.3 bits (70), Expect = 0.41
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 33 SPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS- 209
S TLS+ ++ K I ++ Y ++ DN+ +Q+++ +R L+ SS
Sbjct: 143 SSAVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSR 202
Query: 210 IVLMGKNTM 236
I L GK M
Sbjct: 203 IFLAGKKVM 211
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 31.5 bits (68), Expect = 0.72
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Frame = +2
Query: 272 PALEK-LLPHIKGN---VGFVFTRGDLVEV--RDKLLENKVQAPARPGAIAPLSVVIPA 430
PAL+K L H K VG + T GDL + + L+++KV P PGA+ +S + PA
Sbjct: 131 PALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALP--PGAMGKISYIAPA 187
>11_06_0266 - 21791757-21792982,21793154-21793178
Length = 416
Score = 31.1 bits (67), Expect = 0.95
Identities = 22/62 (35%), Positives = 27/62 (43%)
Frame = +3
Query: 222 GKNTMMRKAIKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSRLQLVPVP 401
GK T+ R+A + +W I R L S LRSV WR +RL P P
Sbjct: 4 GKGTIGREAQRRSWADIPADIIGVVVGR--LPSVED-RARLRSVCQAWRAAARLHRPPPP 60
Query: 402 LP 407
LP
Sbjct: 61 LP 62
>01_01_0703 -
5425713-5425862,5426302-5426451,5426853-5426964,
5427120-5427481,5427578-5427712,5427812-5427889,
5427989-5428174,5428266-5428452,5428552-5428658,
5428732-5428806,5428885-5429040,5429165-5429437,
5429548-5429643,5429724-5429814,5429883-5430385
Length = 886
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/51 (27%), Positives = 32/51 (62%)
Frame = +1
Query: 511 EIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 663
E++ +++P D VG S ++++ +++ P+S VV+ +Y+S + A +I
Sbjct: 346 EMLPSGFLIRPSD-VGGSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKI 395
>11_01_0355 + 2679561-2680985,2681183-2682295
Length = 845
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +3
Query: 249 IKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSRLQLVP 395
I+ W ++ HTS TL+ SP+ +S+ T+C+ + + P
Sbjct: 476 IQDLWNPMRNGSAPHHTSELTLSFSSPSPSSISGYTSCYNNNNMMSSKP 524
>06_01_0090 - 724296-724532,724756-724938,725038-725088,725520-725639,
725738-725840,726106-726264,726728-726846,726891-727004,
727119-727277,727404-727451,728464-728640,729064-729116,
729549-729661,729793-729873,729966-730081,730786-730905,
732321-732429,732593-732770,732852-732920,733102-733233,
733657-733766,733843-734003,734081-734171,734258-734355,
734499-734619,734732-734892,734985-735090,735142-735236,
735828-735852,736008-736084,736196-736282,736372-736421,
736558-736639,736735-736795,737064-737116,737206-737395,
737472-737595,737860-737962,738064-738156,740344-740422,
740508-740584,740915-741043,742614-742731,742816-742913,
743457-743546,744998-745123,745238-745351,745488-745611,
745865-746019,746104-746201,746357-746600
Length = 1926
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = +2
Query: 164 LATDAADPYLATWLQYRAHGKKHYDAQSHQNHLDNNPALEKLLPHIKGNVGFVFTRGDLV 343
+++D Y + ++ HGK D + + L NP L + P + N +FTRGD +
Sbjct: 1254 VSSDGRKEYYSKLVKADVHGK---DQEIYSIKLPGNPKLGEGKPENQ-NHAIIFTRGDAI 1309
Query: 344 EVRDKLLENKVQ 379
+ D +N ++
Sbjct: 1310 QTIDMNQDNYLE 1321
>03_02_0600 -
9748382-9748933,9749805-9749840,9751164-9751218,
9751588-9751697,9751955-9752602
Length = 466
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/38 (39%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +3
Query: 168 QQMQQIRISLRGSSIVLMGKNTMMRKAIK-TTWTTIQP 278
+Q+Q IR +L + +L+ KNT++ KAI+ T W ++P
Sbjct: 74 KQLQGIRDTLPETCRLLVAKNTLVGKAIEGTPWEALKP 111
>01_01_1071 - 8446761-8447440,8449334-8450489
Length = 611
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/74 (25%), Positives = 29/74 (39%)
Frame = -1
Query: 686 RSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRLASEAPTLSPGFKMCTSLMISK 507
R SG + I G I T ++T P G+ + P + GF + ++ +K
Sbjct: 447 RVSGTVDFIFGNGIAVIQRTTISTLPPAAGQNAGSVTAQGRRDPNQNTGFALHACIVEAK 506
Query: 506 YPLKFW*GWKELGR 465
YP WK R
Sbjct: 507 YPTYLGRPWKPFSR 520
>11_06_0269 - 21800104-21800655,21800824-21801370,21801398-21801513
Length = 404
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 321 CSPAETSLRSVTNCWRTKSRLQLVPVPLP 407
C+ +RSV + WR + +Q P PLP
Sbjct: 82 CAAGRARVRSVCSSWRNAAAIQRPPRPLP 110
>11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,
2233053-2233513,2233593-2233717,2233801-2234098,
2235004-2236234,2236562-2237233,2237329-2238539
Length = 1884
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = +2
Query: 182 DPYLATWLQYRAHGKKHYDAQSHQNHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKL 361
DP LA++ + G + DA N + NP +KL N + + V D
Sbjct: 1640 DPLLASYGRVEPFGAQTMDADLSMNMMSFNPGNQKLSVRRGQNKNCEYVDQSSIHVDDYY 1699
Query: 362 LENKVQAPA 388
++N+ Q A
Sbjct: 1700 IQNQPQGNA 1708
>06_03_1442 -
30172595-30172606,30172607-30172684,30173034-30173435,
30173503-30173577,30173667-30173822,30173952-30174143,
30174202-30174208,30175866-30175918
Length = 324
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/51 (25%), Positives = 31/51 (60%)
Frame = +1
Query: 511 EIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 663
E++ +++P D G S ++++ +++ P+S VV+ +Y+S + A +I
Sbjct: 109 EMLPSGFLIRPSDG-GGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKI 158
>06_03_1439 -
30157110-30157121,30157122-30157199,30157549-30157950,
30158018-30158092,30158182-30158337,30158467-30158658,
30158717-30158723,30160381-30160433
Length = 324
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/51 (25%), Positives = 31/51 (60%)
Frame = +1
Query: 511 EIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 663
E++ +++P D G S ++++ +++ P+S VV+ +Y+S + A +I
Sbjct: 109 EMLPSGFLIRPSDG-GGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKI 158
>06_03_1427 -
30090464-30090475,30090476-30090553,30090903-30091304,
30091372-30091446,30091536-30091691,30091821-30092012,
30093735-30093908,30094966-30095123,30096738-30096914,
30096996-30097035
Length = 487
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/51 (25%), Positives = 31/51 (60%)
Frame = +1
Query: 511 EIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 663
E++ +++P D G S ++++ +++ P+S VV+ +Y+S + A +I
Sbjct: 272 EMLPSGFLIRPSDG-GGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKI 321
>06_03_1422 +
30058936-30058975,30059057-30059233,30060848-30061005,
30062063-30062236,30063959-30064150,30064280-30064435,
30064525-30064599,30064667-30065068,30065418-30065495,
30065840-30066173,30066275-30066339
Length = 616
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/51 (25%), Positives = 31/51 (60%)
Frame = +1
Query: 511 EIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 663
E++ +++P D G S ++++ +++ P+S VV+ +Y+S + A +I
Sbjct: 272 EMLPSGFLIRPSDG-GGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKI 321
>06_01_0486 - 3455030-3455770
Length = 246
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 393 PVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPKF 497
P P P C S PP TP + R P + PS P +
Sbjct: 66 PPPSPRCPSCHPPYTPPT-PRPPPTPPYVPSPPPY 99
>07_03_0196 +
14995224-14995489,14995859-14995877,14996703-14996839,
14998365-14998457,15001597-15001932,15003035-15003503
Length = 439
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = -2
Query: 400 GTGTSWSLDFVLQQFVTDLNEVSAGEHEANVALDVWQQFLEGW 272
G +WS F +LN +S H+ V L+ W + W
Sbjct: 197 GNAENWSSQGDKDDFYNELNTISEARHKNLVKLEGWCCHINAW 239
>03_04_0243 + 19298293-19299117
Length = 274
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -3
Query: 423 MTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMCGNSFS 280
+ TD+ + APG A A + S SRTS +P ++ PT P +S +
Sbjct: 172 VVTDSLSRAPGAAWAAAMAPTSWSRTS--APPASSSPTSPRRARSSLT 217
>11_06_0271 - 21804629-21805836,21805997-21806015
Length = 408
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 321 CSPAETSLRSVTNCWRTKSRLQLVPVPLP 407
C+ +RSV WR + +Q P PLP
Sbjct: 32 CAADRARVRSVCRSWRAAAAIQRPPPPLP 60
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +3
Query: 393 PVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPK 494
P P PH S PP P S + LSSKL P P+
Sbjct: 51 PPPPPHRPSPSPPPNPLS-SKLWLSSKLSPPPPE 83
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,563,674
Number of Sequences: 37544
Number of extensions: 524272
Number of successful extensions: 1584
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1583
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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