Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10389
         (797 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118940-1|AAM50800.1|   79|Drosophila melanogaster LD24950p pro...    32   1.0  

>AY118940-1|AAM50800.1|   79|Drosophila melanogaster LD24950p
           protein.
          Length = 79

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 20/48 (41%), Positives = 22/48 (45%)
 Frame = -1

Query: 356 SPQTSTAAYRPPPSLATKTNPDVHCGTRPLPSLAQRPVLHCLHTADPR 213
           SP  S  A   PP+L   T P V C     P+L QR  LH  H  D R
Sbjct: 30  SPALSFTAGERPPALRPPTGPGVQC-----PALLQRQQLHSGHRQDWR 72


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,515,186
Number of Sequences: 53049
Number of extensions: 818202
Number of successful extensions: 2127
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2127
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)