Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10388
         (543 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2306|AAM68504.1|  147|Drosophila melanogaster CG8332-PB...   138   3e-33
AY070991-1|AAL48613.1|  148|Drosophila melanogaster RE08270p pro...   137   1e-32
AE013599-2305|AAF57984.1|  148|Drosophila melanogaster CG8332-PA...   137   1e-32
AY119656-1|AAM50310.1|  460|Drosophila melanogaster SD02418p pro...    29   4.1  
AE014296-1211|AAF50597.1|  460|Drosophila melanogaster CG8616-PA...    29   4.1  

>AE013599-2306|AAM68504.1|  147|Drosophila melanogaster CG8332-PB,
           isoform B protein.
          Length = 147

 Score =  138 bits (335), Expect = 3e-33
 Identities = 65/83 (78%), Positives = 70/83 (84%)
 Frame = +1

Query: 4   MAEVDETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVK 183
           M +VDE LKKKR F+KFTYRGVDLDQLLDMPN QL+ELMH         GLKRKPMAL+K
Sbjct: 1   MQQVDENLKKKRTFKKFTYRGVDLDQLLDMPNNQLVELMHSRARRRFSRGLKRKPMALIK 60

Query: 184 KLRRAKKEAPPNEKPEIVKTHLR 252
           KLR+AKKEAPPNEKPEIVKTHLR
Sbjct: 61  KLRKAKKEAPPNEKPEIVKTHLR 83



 Score =  129 bits (311), Expect = 3e-30
 Identities = 56/66 (84%), Positives = 61/66 (92%)
 Frame = +3

Query: 246 LEKMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSS 425
           L  MIIVPEM GSI+G+YNGK F QVE+KPEMIGHYLGEF++TYKPVKHGRPGIGATHSS
Sbjct: 82  LRNMIIVPEMTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGATHSS 141

Query: 426 RFIPLK 443
           RFIPLK
Sbjct: 142 RFIPLK 147


>AY070991-1|AAL48613.1|  148|Drosophila melanogaster RE08270p
           protein.
          Length = 148

 Score =  137 bits (331), Expect = 1e-32
 Identities = 64/81 (79%), Positives = 69/81 (85%)
 Frame = +1

Query: 10  EVDETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKL 189
           +VDE LKKKR F+KFTYRGVDLDQLLDMPN QL+ELMH         GLKRKPMAL+KKL
Sbjct: 4   QVDENLKKKRTFKKFTYRGVDLDQLLDMPNNQLVELMHSRARRRFSRGLKRKPMALIKKL 63

Query: 190 RRAKKEAPPNEKPEIVKTHLR 252
           R+AKKEAPPNEKPEIVKTHLR
Sbjct: 64  RKAKKEAPPNEKPEIVKTHLR 84



 Score =  129 bits (311), Expect = 3e-30
 Identities = 56/66 (84%), Positives = 61/66 (92%)
 Frame = +3

Query: 246 LEKMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSS 425
           L  MIIVPEM GSI+G+YNGK F QVE+KPEMIGHYLGEF++TYKPVKHGRPGIGATHSS
Sbjct: 83  LRNMIIVPEMTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGATHSS 142

Query: 426 RFIPLK 443
           RFIPLK
Sbjct: 143 RFIPLK 148


>AE013599-2305|AAF57984.1|  148|Drosophila melanogaster CG8332-PA,
           isoform A protein.
          Length = 148

 Score =  137 bits (331), Expect = 1e-32
 Identities = 64/81 (79%), Positives = 69/81 (85%)
 Frame = +1

Query: 10  EVDETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKL 189
           +VDE LKKKR F+KFTYRGVDLDQLLDMPN QL+ELMH         GLKRKPMAL+KKL
Sbjct: 4   QVDENLKKKRTFKKFTYRGVDLDQLLDMPNNQLVELMHSRARRRFSRGLKRKPMALIKKL 63

Query: 190 RRAKKEAPPNEKPEIVKTHLR 252
           R+AKKEAPPNEKPEIVKTHLR
Sbjct: 64  RKAKKEAPPNEKPEIVKTHLR 84



 Score =  129 bits (311), Expect = 3e-30
 Identities = 56/66 (84%), Positives = 61/66 (92%)
 Frame = +3

Query: 246 LEKMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSS 425
           L  MIIVPEM GSI+G+YNGK F QVE+KPEMIGHYLGEF++TYKPVKHGRPGIGATHSS
Sbjct: 83  LRNMIIVPEMTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGATHSS 142

Query: 426 RFIPLK 443
           RFIPLK
Sbjct: 143 RFIPLK 148


>AY119656-1|AAM50310.1|  460|Drosophila melanogaster SD02418p
           protein.
          Length = 460

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 18/63 (28%), Positives = 27/63 (42%)
 Frame = -1

Query: 318 G*KFFRCKCRQLNRPSRER*SFSQVSLHDLWLLIRRSLFLGATQLLDQCHWFTFKTTSEP 139
           G +F     R L   + E   F+Q+  H  WLL+  S FL          W   +++  P
Sbjct: 187 GAQFLMPTSRALLELTGEEHIFAQLHSHFSWLLLAGSRFLTEHVTFGNLPWLPPQSSGRP 246

Query: 138 PAR 130
           PA+
Sbjct: 247 PAQ 249


>AE014296-1211|AAF50597.1|  460|Drosophila melanogaster CG8616-PA
           protein.
          Length = 460

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 18/63 (28%), Positives = 27/63 (42%)
 Frame = -1

Query: 318 G*KFFRCKCRQLNRPSRER*SFSQVSLHDLWLLIRRSLFLGATQLLDQCHWFTFKTTSEP 139
           G +F     R L   + E   F+Q+  H  WLL+  S FL          W   +++  P
Sbjct: 187 GAQFLMPTSRALLELTGEEHIFAQLHSHFSWLLLAGSRFLTEHVTFGNLPWLPPQSSGRP 246

Query: 138 PAR 130
           PA+
Sbjct: 247 PAQ 249


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,719,273
Number of Sequences: 53049
Number of extensions: 411490
Number of successful extensions: 1049
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)