Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31056
         (661 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63542-1|AAC51145.1|  252|Homo sapiens FAP protein protein.            30   6.4  
U14971-1|AAA85659.1|  194|Homo sapiens ribosomal protein S9 prot...    30   6.4  
AY392858-1|AAS85801.1|  122|Homo sapiens immunoglobulin heavy ch...    30   6.4  

>U63542-1|AAC51145.1|  252|Homo sapiens FAP protein protein.
          Length = 252

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 462 NRPPNPYKDKFKPSYPLHHRISQSQFTL 545
           N  P P+     PSYPLH R+ Q + TL
Sbjct: 123 NTKPKPFCCDHPPSYPLHFRLYQMEKTL 150


>U14971-1|AAA85659.1|  194|Homo sapiens ribosomal protein S9
           protein.
          Length = 194

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +1

Query: 454 RLLIDHQIHIRINLNLV-IPSITESANPSSHSAAAITAPGGLVRPGGTRPNRSKPQKASF 630
           R+LI  Q HIR+   +V IPS     +   H   ++ +P G+ RPG  +   +K  +   
Sbjct: 127 RVLI-RQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPTGVGRPGRVKRKNAKKGQGGA 185

Query: 631 G 633
           G
Sbjct: 186 G 186


>AY392858-1|AAS85801.1|  122|Homo sapiens immunoglobulin heavy chain
           protein.
          Length = 122

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
 Frame = +1

Query: 91  IFNVLNFIWKMQYLVQLVVAFLLTTQASSDNSTLSEDT----CITEHGLWG 231
           +FN+ N+  K Q  V L       T     +S  SEDT    C T  G WG
Sbjct: 50  VFNITNYAQKFQGRVTLTADESTNTAYMELSSLRSEDTAVYYCATREGFWG 100


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,507,722
Number of Sequences: 237096
Number of extensions: 2263815
Number of successful extensions: 14096
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14088
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)