Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31056
         (661 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78418-2|CAB01695.1|  817|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z47067-1|CAA87328.1|  776|Caenorhabditis elegans Hypothetical pr...    28   5.1  
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc...    28   5.1  
AC006638-1|AAK85482.1|  495|Caenorhabditis elegans Cyclase assoc...    28   5.1  
Z50742-2|CAA90616.1|  491|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AF078784-1|AAK18967.1|  458|Caenorhabditis elegans Hypothetical ...    28   6.8  
Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr...    27   8.9  
AF038608-2|AAU05595.1|  297|Caenorhabditis elegans Serpentine re...    27   8.9  

>Z78418-2|CAB01695.1|  817|Caenorhabditis elegans Hypothetical
           protein F25D7.3 protein.
          Length = 817

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +1

Query: 460 LIDHQIHIRINLNLVIPSITESANPSSHSAAAITAPGGLV-RPGGTRPNRSKPQKASFGN 636
           L+D +  +R +L L +   +   +P + + AAITA GG   +P   +P  +    A FGN
Sbjct: 367 LVDFKEFMRKSLQLKLVDTSMFVSPVAQTTAAITATGGRSGQPIDVQPVLAATAGAHFGN 426


>Z47067-1|CAA87328.1|  776|Caenorhabditis elegans Hypothetical
           protein C43C3.1 protein.
          Length = 776

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +2

Query: 212 RNTDYGAACSKSGPFCNSTTYKTRPHNGVAPCPRLLRI*PDRSHATTTTASPLVPHYS 385
           ++T + A    S     +T ++T  H  + P P  L + P R +  +  ASP+ P Y+
Sbjct: 405 QHTAHHAVRDSSSSRTGTTIHETITHTPI-PIPATLPVQPIREYTYSRDASPIRPSYT 461


>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
            protein homologprotein 1, isoform a protein.
          Length = 1256

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = +1

Query: 508  PSITESANPSSHSAAAITAPGGLVRPGGTRPNRSKPQKASFGN 636
            P     A+ S+ SAAA +AP     PGG  P    P    F N
Sbjct: 984  PGAAPDASASAPSAAAPSAPKAPAGPGGPPPPPPPPPADFFAN 1026


>AC006638-1|AAK85482.1|  495|Caenorhabditis elegans Cyclase
           associated protein homologprotein 1, isoform b protein.
          Length = 495

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = +1

Query: 508 PSITESANPSSHSAAAITAPGGLVRPGGTRPNRSKPQKASFGN 636
           P     A+ S+ SAAA +AP     PGG  P    P    F N
Sbjct: 223 PGAAPDASASAPSAAAPSAPKAPAGPGGPPPPPPPPPADFFAN 265


>Z50742-2|CAA90616.1|  491|Caenorhabditis elegans Hypothetical
           protein K09A11.2 protein.
          Length = 491

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 64  YIFSFIHFIIFNVLNFIWKM 123
           +I +F+ FIIF V +F WK+
Sbjct: 4   FILAFVIFIIFYVFHFYWKV 23


>AF078784-1|AAK18967.1|  458|Caenorhabditis elegans Hypothetical
           protein H34I24.2 protein.
          Length = 458

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 523 SANPSSHSAAAITAPGGLVRPGGTRP 600
           +A PSS SAA +T+ G  V  G T P
Sbjct: 87  TAEPSSSSAAPVTSGGSTVSAGPTTP 112


>Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical
           protein C11E4.6 protein.
          Length = 1170

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = +3

Query: 399 PSHYNEWQASXXXXXXXXKIVNRPPNPY 482
           PS +NEWQ S         I NRPP PY
Sbjct: 467 PSKFNEWQKS------QLTISNRPPAPY 488


>AF038608-2|AAU05595.1|  297|Caenorhabditis elegans Serpentine
           receptor, class z protein70 protein.
          Length = 297

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +1

Query: 37  YVFKCI*TPYIFSFIHFIIFNVLNFIWKMQYLVQLVV 147
           Y+F    T  +F  I+ ++F ++  ++  Q+ +QL+V
Sbjct: 217 YIFWLTITVVVFKLIYILLFTIIFILFLPQFSIQLLV 253


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,562,225
Number of Sequences: 27780
Number of extensions: 343714
Number of successful extensions: 1045
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)