Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31056
         (661 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             27   0.12 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   1.5  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   4.5  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   4.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   4.5  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   6.0  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   7.9  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = +2

Query: 212 RNTDYGAACSKSGPFCNSTTYKTRPHNGVAPCPRLLRI*PDRSHATTTTASPLVPHYSAS 391
           RN  Y  A  +      S+T+ + PH   AP   +  I    +  TTTT +   P+ + +
Sbjct: 625 RNKVYKLAMERERDASLSSTH-SHPHEPGAPATTITTITTTTTTTTTTTTTTTTPNTTQN 683

Query: 392 AS 397
           AS
Sbjct: 684 AS 685


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -3

Query: 404 RGVRQMLSSGVQAGRRWWWWHEIYPVRYVVTVGRGQRHY 288
           RGV +++ S  +A  R W  H+  P     T+GR  R+Y
Sbjct: 485 RGVFKLVDS--KAVSRLWGLHKNKPDMNYETMGRALRYY 521


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 375 PTTQHLPHPSHYNEWQ 422
           P  QHLP   H  EW+
Sbjct: 505 PLPQHLPRIHHDAEWK 520


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 375 PTTQHLPHPSHYNEWQ 422
           P  QHLP   H  EW+
Sbjct: 420 PLPQHLPRIHHDAEWK 435


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 375 PTTQHLPHPSHYNEWQ 422
           P  QHLP   H  EW+
Sbjct: 739 PLPQHLPRIHHDAEWK 754


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 4/26 (15%)
 Frame = -3

Query: 353 WWWHEIYP----VRYVVTVGRGQRHY 288
           W WH +YP    +R V    RG+  Y
Sbjct: 210 WHWHLVYPFEGDIRIVNKDRRGELFY 235


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 412 MSGRPVRHRHQDLGRLLIDHQIHIRI 489
           + GR + +R   L  +L+D   HI+I
Sbjct: 101 LHGRGIVYRDLKLDNVLLDQDGHIKI 126


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,230
Number of Sequences: 438
Number of extensions: 3954
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)